BAC Information

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BAC

Clone NameB6Ng01-291N07
Chromosome14 (Build37)
Map Location 122,500,024 - 122,501,019
singlet/doubletsinglet
Overlap genenone
Upstream geneFarp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2
Downstream geneTm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291N07.bB6Ng01-291N07.g
ACCGA088618GA088619
length514998
definitionB6Ng01-291N07.b B6Ng01-291N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagagcagccagaggcacataagagattctgtctcaaaccaaccaaccaa
ccaagacaaacccactaacaaatagtaacatctccactacaaaactgaag
tggatcaaattgtgtgatataagatataatatatatcagcttccaaacgc
tgacaccactgcatacactagcaagattttatcgaaaggacccagatgta
gctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatg
atcacagtcagctattggatggatcacagggctcccaatggaggagctag
agaaagtacccaaggagctaaagggaactgcaaccctataggtggaacaa
caatatgaactaaccagtaccccggagctcttgactctagctgcatatgt
atcaaaagatggcctagtcggccatcactggaaagagaggcccattggac
acgcaaactgtatatgccccagtacagcggaacgccagggccaaaaaaaa
tgggaatgagtggg
gaattcctgtttggggacccaaaagggaattggaaaacggtaatgtggaa
agaaagctagctggcatcatttgttgtcctgtctctgtgttcagaaagtt
caggccttaactgaagtcttgattgggatggtttgaatggctggctgagt
taaggtcatctgggatcagcagtctttcctgacgctgttctggaagcaag
tctctgaaaagagcatcagtttaggcaggatcaatcagtgagctggaaca
gcaggtctcagcgtcttagcatccctgggggtgaatcctgtcagggctgc
cctcttggtgtttcattctgtaatatataaaccttacaatcagtatttag
ttctagaaagacatttgtatggaatgtgcagggtgcacagatcagtcagg
atgattttttgttctttgagtaggtgaaaggcaactgcctttttttcttt
ttagtttgatcatataatcaaactgtaatataatttttctaggttatgct
gaccaaataatccctctctataagtcctgatttataagccattaaaattg
cttttctatgctgggaagagacaccataaccaagggaacttaaaatggaa
agtgtttaattttaaaagctcacgatttcagaattggttcatgaccacca
tgtcagagagcatgatgggggcaggcatggtgctggagcaatagctgaga
gcttatgccctttttttgtttgtttttttggttttggtttttgtttttgt
tttttctctgtgtatccctgactgtcctgaaactcactctgtagaccagg
ctggcctcgaactcagaaatctgtctgcctgtggggaagccacatgtgcc
gttgctgagtggcactgactactgctggcaccacgcataagattggacaa
acaaccaatgtgtacatatgcagtaaagttttttgcatagacactgcctg
ggcccgggcatgataatgaggttctgtaaggtactgagagtattaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122500024_122501019
seq2: B6Ng01-291N07.g_69_1066

seq1  GAATTCCTGTTTGGGGACCCAAAAGGGAATTGGAAAACGGTAATGTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTGGGGACCCAAAAGGGAATTGGAAAACGGTAATGTGGAA  50

seq1  AGAAAGCTAGCTGGCATCATTTGTTGTCCTGTCTCTGTGTTCAGAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTAGCTGGCATCATTTGTTGTCCTGTCTCTGTGTTCAGAAAGTT  100

seq1  CAGGCCTTAACTGAAGTCTTGATTGGGATGGTTTGAATGGCTGGCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTAACTGAAGTCTTGATTGGGATGGTTTGAATGGCTGGCTGAGT  150

seq1  TAAGGTCATCTGGGATCAGCAGTCTTTCCTGACGCTGTTCTGGAAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCATCTGGGATCAGCAGTCTTTCCTGACGCTGTTCTGGAAGCAAG  200

seq1  TCTCTGAAAAGAGCATCAGTTTAGGCAGGATCAATCAGTGAGCTGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAAAGAGCATCAGTTTAGGCAGGATCAATCAGTGAGCTGGAACA  250

seq1  GCAGGTCTCAGCGTCTTAGCATCCCTGGGGGTGAATCCTGTCAGGGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTCAGCGTCTTAGCATCCCTGGGGGTGAATCCTGTCAGGGCTGC  300

seq1  CCTCTTGGTGTTTCATTCTGTAATATATAAACCTTACAATCAGTATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGGTGTTTCATTCTGTAATATATAAACCTTACAATCAGTATTTAG  350

seq1  TTCTAGAAAGACATTTGTATGGAATGTGCAGGGTGCACAGATCAGTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAAGACATTTGTATGGAATGTGCAGGGTGCACAGATCAGTCAGG  400

seq1  ATGATTTTTTGTTCTTTGAGTAGGTGAAAGGCAACTGCCTTTTTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTTTGTTCTTTGAGTAGGTGAAAGGCAACTGCCTTTTTTTCTTT  450

seq1  TTAGTTTGATCATATAATCAAACTGTAATATAATTTTTCTAGGTTATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGATCATATAATCAAACTGTAATATAATTTTTCTAGGTTATGCT  500

seq1  GACCAAATAATCCCTCTCTATAAGTCCTGATTTATAAGCCATTAAAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAATAATCCCTCTCTATAAGTCCTGATTTATAAGCCATTAAAATTG  550

seq1  CTTTTCTATGCTGGGAAGAGACACCATAACCAAGGGAACTTAAAATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATGCTGGGAAGAGACACCATAACCAAGGGAACTTAAAATGGAA  600

seq1  AGTGTTTAATTTTAAAAGCTCACGATTTCAGAATTGGTTCATGACCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTAATTTTAAAAGCTCACGATTTCAGAATTGGTTCATGACCACCA  650

seq1  TGTCAGAGAGCATGATGGGGGCAGGCATGGTGCTGGAGCAATAGCTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGAGCATGATGGGGGCAGGCATGGTGCTGGAGCAATAGCTGAGA  700

seq1  GCTTATGCCCTTTTTTTGTTTGTTTTTTTGGTTTTGGTTTTTGTTTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGCCCTTTTTTTGTTTGTTTTTTTGGTTTTGGTTTTTGTTTTTGT  750

seq1  TTTTTCTCTGTGTATCCCTGACTGTCCTGGAACTCACTCTGTAGACCAGG  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTTCTCTGTGTATCCCTGACTGTCCTGAAACTCACTCTGTAGACCAGG  800

seq1  CTGGCCTCGAACTCAGAAATCTGTCTGCCTGT-GGGAAGCCACATGTGCC  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGGCCTCGAACTCAGAAATCTGTCTGCCTGTGGGGAAGCCACATGTGCC  850

seq1  GTTGCTGAGTGGCACTGACTACTGCTGGCCACCACGCATAAGATTGGACA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTTGCTGAGTGGCACTGACTACTGCTGG-CACCACGCATAAGATTGGACA  899

seq1  AACAACCAATGTGTACATATGCAGTAAAGTTTTTTGCAAAGACACTGCCT  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACAACCAATGTGTACATATGCAGTAAAGTTTTTTGCATAGACACTGCCT  949

seq1  -GGCCCGGGCATGATAATGAGGTTCTGTAAGGTACTGAGAGTA-TAACC  996
       |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGCCCGGGCATGATAATGAGGTTCTGTAAGGTACTGAGAGTATTAACC  998