BAC Information

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BAC

Clone NameB6Ng01-292C15
Chromosome14 (Build37)
Map Location 33,077,111 - 33,078,089
singlet/doubletsinglet
Overlap geneParg
Upstream geneDnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23
Downstream geneLOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18, EG622657, Arhgap22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292C15.bB6Ng01-292C15.g
ACCGA088871GA088872
length1,2061,140
definitionB6Ng01-292C15.b B6Ng01-292C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcagtggagtcatcagagcttagagatttattgggaggataga
agggcacataaatatacaatgccaatttccttaataattataagaccatt
ttaacgatctatttcattcttaatgcatggtggaagttttatacatttca
ggaattggtccatctcatctaacttgtcagatttatgtgtatagttgtta
taatatttttaattgtatttttatatctatggaggcctaagtgatgtcat
ccattctgttgctgatattggtgattcattctttttctctgtctctctct
ccctctccctccctctacacacacacacacacacacacacacacacacac
acacacacacacacacacacagcacatggcactttaaatctctctttaac
tgttttacctgaattgaatctttaaattgtatacttgtattttcattcat
tgtggtgcatgttttataaattctattatgattcttattttaacttatgg
attattttcaagtgcactgtttaacatgcaagtgtgtgttatttcctgtt
atttcctgttatctgtttctatcatagtcagagaacaaacacatcttttc
catttttgagggctgttctatggccctagatgtagtctggtttgctatat
gttcagcaggtgttttaaaggaatgtctactatgctattgttggatgaat
tattatgtaaatgtcaaacacctcctgttgggttgtggtgttgaattctg
tgtcttcactaaatttatacctagctgttgtgtccaccattggcagaaaa
gtgctgatgtctcagctacaatagtacgttttctatatttttccctcctg
ttttgctttgcttcacatacttgcaaagtatttgttactcatcacatatg
cagtgccatgcccttttgcagatttacccttttctttttacataatttgc
ctcctaggtctctggttctgtatgtttgaagtattatatcacactaaatt
caaattcatggtttcttttgaattaatgcttgcatgaaaataagtacctt
tcctcctttttgcttacagcaaaatttaatattataacttggacagtaag
ctcttttgtaaggaaggaatgtaagctggagtaccattctaaataaatat
ctaaccaccacttggcactatttcctagtcgggcatttaaatgatattta
tatcat
gaattcccccattagagtttttgtcgtcggcctatattgtttacttcact
tcttctctaaacaagctctgtggagtctgtactgcttgttgaatgtcgtc
actaaggttcctgttcactttactagtggttagctaatgatcatgcagat
ttcttaagtgactggaataagtacgtttcctgcgttgctggggtgctctg
tgtgcgtgcatgcttggcatcatcacccttccatttagccttaacttcct
gctcccaaagattcaaggttgggcagtggggaaagttgaaggctttctct
ggtttttttgggcatttgtatcacacggtgttctgcattctcagaaatat
gctagaacttttctaaactccttgttgtcatcgttccttggatattttgg
ataatctattacttgcaccatgtggtgaccccgttcttagcagtctctgt
ggtaagtagggatccatgctatcttcctctaaagcttggagaccaggctt
tctacactgggcaagctccaggtttgtgaagtcaagacagcctttgcatg
agatctccccagaggataggcctaatgattattctccgaaaaatgggact
ttgaaggaacttcaatattcctgcatcttccctggtgactgctggattgc
tgtcttctacagtagttactgttttaaagttatctttcttcttggccgaa
tgactttacatcagatagacattcttacctacatgatctgatggtttagt
gaggggaggtacacaacacaattaagttagtttatatgagaaattaagat
tagaacctctgcaaaagaatttcttcttagatccttagattgttatttca
agttaataacatgaagaatttcttctagaattctgaagttgtttccacaa
ttgattgaattggaaaggtagagccctttcattctcagcattgcctctgc
tcctgtactgcttgtctctgtagtgctgattaccatgtaggtacataaaa
tggatgaaattggaagttactgggggagggtgggttatgcaacagaattc
acagagggaaactgaagggtaatgacttgctgagatgcctggtggttggg
taaactaacccttggccttacgctcgtcatgaaccctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33077111_33078089
seq2: B6Ng01-292C15.g_217_1204

seq1  CTTAAGTGACTGGAATAAGTACGTTTCCTGCGTTGCTGGGGTGCTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTGACTGGAATAAGTACGTTTCCTGCGTTGCTGGGGTGCTCTGTG  50

seq1  TGCGTGCATGCTTGGCATCATCACCCTTCCATTTAGCCTTAACTTCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGCATGCTTGGCATCATCACCCTTCCATTTAGCCTTAACTTCCTGC  100

seq1  TCCCAAAGATTCAAGGTTGGGCAGTGGGGAAAGTTGAAGGCTTTCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGATTCAAGGTTGGGCAGTGGGGAAAGTTGAAGGCTTTCTCTGG  150

seq1  TTTTTTTGGGCATTTGTATCACACGGTGTTCTGCATTCTCAGAAATATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGGGCATTTGTATCACACGGTGTTCTGCATTCTCAGAAATATGC  200

seq1  TAGAACTTTTCTAAACTCCTTGTTGTCATCGTTCCTTGGATATTTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTTTCTAAACTCCTTGTTGTCATCGTTCCTTGGATATTTTGGAT  250

seq1  AATCTATTACTTGCACCATGTGGTGACCCCGTTCTTAGCAGTCTCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTACTTGCACCATGTGGTGACCCCGTTCTTAGCAGTCTCTGTGG  300

seq1  TAAGTAGGGATCCATGCTATCTTCCTCTAAAGCTTGGAGACCAGGCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGGGATCCATGCTATCTTCCTCTAAAGCTTGGAGACCAGGCTTTC  350

seq1  TACACTGGGCAAGCTCCAGGTTTGTGAAGTCAAGACAGCCTTTGCATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGGCAAGCTCCAGGTTTGTGAAGTCAAGACAGCCTTTGCATGAG  400

seq1  ATCTCCCCAGAGGATAGGCCTAATGATTATTCTCCGAAAAATGGGACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCCAGAGGATAGGCCTAATGATTATTCTCCGAAAAATGGGACTTT  450

seq1  GAAGGAACTTCAATATTCCTGCATCTTCCCTGGTGACTGCTGGATTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACTTCAATATTCCTGCATCTTCCCTGGTGACTGCTGGATTGCTG  500

seq1  TCTTCTACAGTAGTTACTGTTTTAAAGTTATCTTTCTTCTTGGCCGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACAGTAGTTACTGTTTTAAAGTTATCTTTCTTCTTGGCCGAATG  550

seq1  ACTTTACATCAGATAGACATTCTTACCTACATGATCTGATGGTTTAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACATCAGATAGACATTCTTACCTACATGATCTGATGGTTTAGTGA  600

seq1  GGGGAGGTACACAACACAATTAAGTTAGTTTATATGAGAAATTAAGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGTACACAACACAATTAAGTTAGTTTATATGAGAAATTAAGATTA  650

seq1  GAACCTCTGCAAAAGAATTTCTTCTTAGATCCTTAGATTGTTATTTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTGCAAAAGAATTTCTTCTTAGATCCTTAGATTGTTATTTCAAG  700

seq1  TTAATAACATGAAGAATTTCTTCTAGAATTCTGAAGTTGTTTCCACAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACATGAAGAATTTCTTCTAGAATTCTGAAGTTGTTTCCACAATT  750

seq1  GATTGAATTGGAAAGGTAGAGCCC-TTCATTCTCAGCATTGCCTCTGCTC  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GATTGAATTGGAAAGGTAGAGCCCTTTCATTCTCAGCATTGCCTCTGCTC  800

seq1  CTGTACTGCTTGTCTCTGTAGTTGCTGATTACCATGTAGGTACATAAAAT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGTACTGCTTGTCTCTGTAG-TGCTGATTACCATGTAGGTACATAAAAT  849

seq1  GGATGAAATTGGGAAGTTACT-GGGGAAGGTGGG-TATGC-ACAGA--TC  894
      |||||||||| |||||||||| ||||| |||||| ||||| |||||  ||
seq2  GGATGAAATT-GGAAGTTACTGGGGGAGGGTGGGTTATGCAACAGAATTC  898

seq1  ACAGAAGGGAAACTGA--GGGAAGGAC-TGCTGAG-TGCCTGTTG--TTG  938
      |||| |||||||||||  || || ||| ||||||| |||||| ||  | |
seq2  ACAG-AGGGAAACTGAAGGGTAATGACTTGCTGAGATGCCTGGTGGTTGG  947

seq1  GTAAACTAACC--TTGCCTTACGCTCTTTTCATGAACTCTGGA  979
      |||||||||||  | |||||||||||   |||||||| |||||
seq2  GTAAACTAACCCTTGGCCTTACGCTC--GTCATGAACCCTGGA  988