BAC Information

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BAC

Clone NameB6Ng01-292E05
Chromosome14 (Build37)
Map Location 5,929,431 - 6,031,553
singlet/doubletdoublet
Overlap geneENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268
Upstream geneLOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226
Downstream geneLOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292E05.bB6Ng01-292E05.g
ACCGA088947GA088948
length1,1601,050
definitionB6Ng01-292E05.b B6Ng01-292E05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,929,431 - 5,930,595)(6,030,506 - 6,031,553)
sequence
gaattcctaaaagagcagaaaagctatcttccagctggtttgctaagcta
tgttcctcttcctaaccaccattgtcagacatatgccacactccctgtta
caggcccggttgccttgaaatgtataagctgcctcagacataaagatatg
gggaacattgtcaggtcatatcagatgggacgcagggaaatcctgaagtt
catagtgcttagcactatcaagcactaattaatcgtgtgtcttcaaatcc
aaagtgtctgagtcctcaccacatgacatgaccaggggagcatccttctt
tgttcttttcatcagagactcaagttacctacagtaatctggaagatgaa
gtgcttcaactcccttccatgaaaggacacattgttattctcatagtgcc
cactcctgccattttttgccactcaaaatgaaattaaatagctcccagaa
aagtagctgcaggtttgtcaattcctggctctgtcaaactaatcatcaga
aattcttgactctttttctgacattgacaaagtccaaggcttcagcttgt
aagacctactcctggaaggcccagctcaagcctacctctaccaggaagtt
ccccaactctgcccaggactcactgtgccttctccagaatgatttccttc
ttcctttttcatgagaaaggattccctcttccttctctgttggtctggtc
tctccttcatcgccattctctttctgaaatagcctgagcagccaggaaaa
cattcctgctggtgaacccagagcaaacagaagggatgaaccacaggcag
ttgctgtcaccacaacacaggtgacaacacagaggattctagttctatcc
tagatacaagagattctccaaggaaggcattactgatgatgtcactagca
actgccatgacctacctgttaactagttctgcccagcttggtcctttttc
tggggtgcctctcctggagcctcctcatggacccgtggatcccctttggc
aacctctccttccaaagctggagaatctactgctcatagatgtcatgtgc
ttttgaggggacgttggaatgactctgacatgccttaagagatttggtag
caacccaaatcctctagacctgtgattgtagtagatgttccacaacagtc
aattaccagc
gaattcaccgttagaaaatattgtccaagttttgtacaattaaacctata
ggagaaagatatttgcctctttgagacaggaaaaccctgggtaattggag
tgtatgtcacatgaattgctcaggtggcatatttattgttgtgaaacatc
tactacatccacagtccctagagatttgggtgctaacaaaatctcttaag
catgtcagagtcctaaccaacgttctccctcaaaagcacatgacatctaa
tgaagcagtagaattctccagctttggaaggagaggttgccaaaggggat
cccacggatccatgagaggctccaggagaggcaccccagaaaaggatcaa
gctggggagaactagttaacaggtaggtcatggcagttgctagtgacatc
atcagtaatgccttccttggagaatctcttgtatctcggagagaactaga
atcttctgcgttgtcacctgtgttgtggtgacagcaactgcctgtggttc
atcccttctgtttgctctgggttcaccagcaggaatgttttcctggctgc
tcaggctatgtcagaaagagaatggcgatgaaggagagaccagaccaaca
gagaaggaagagggaatcctttctcatgaaaaaggaagaaggaaatggtt
atggagaatgcacagtgagtcctgggcagagttggggaacttcctggtag
aggtaggcttgagctgggccgtccaggagtaggtcttacaagctgaagcc
ttggactttgtcaatgtcagacaaagattcaagaatttctgatgattagt
ttgacagagccaggaattgacaaacctgcagctacttttctgggagctat
ttaatttcattttgagtggcaaagaatgccaggagtgggcactattggaa
tatcagtgtgttattcctttcatggaagggagttgaagcacttcaccttc
cagattactgtagtaacttgagtctctgatgaaaacaacagagatgatgc
tccccctggttcatgtcatgtggtgaggactcagaacactttgggattaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5929431_5930595
seq2: B6Ng01-292E05.b_46_1205

seq1  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50

seq1  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100

seq1  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150

seq1  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200

seq1  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250

seq1  AATGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTC  300
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTT  300

seq1  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350

seq1  GTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTGCC  400
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGCTTCAACTCCCTTCCATGAAAGGACACATTGTTATTCTCATAGTGCC  400

seq1  CACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAA  450
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGCCATTTTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAA  450

seq1  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGA  500

seq1  AATTCTTGACTCTTTTTCTGACATTGACAAAGTCCAAGGCTTCAGCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGACTCTTTTTCTGACATTGACAAAGTCCAAGGCTTCAGCTTGT  550

seq1  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600

seq1  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCAGAATGATTTCCTTC  650

seq1  TTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTC  700

seq1  TCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAA  750

seq1  CATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAG  800

seq1  TTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTATCC  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGCTGTCACCACAACACAGGTGACAACACAGAGGATTCTAGTTCTATCC  850

seq1  TAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCA  900

seq1  ACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCC-TTTTC  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCCTTTTTC  950

seq1  TGGGGTGCCTCTCCTGGAGCCT-CTCATGGACCCGTGGGATCCCCTTTTG  998
      |||||||||||||||||||||| ||||||||||||| ||||||||||| |
seq2  TGGGGTGCCTCTCCTGGAGCCTCCTCATGGACCCGT-GGATCCCCTTTGG  999

seq1  CAACCTCTCCTTCCAATTCTGGAGAATTCTACTGCTTCATTAGATGTCAT  1048
      ||||||||||||||||  |||||||| |||||||| ||| ||||||||||
seq2  CAACCTCTCCTTCCAAAGCTGGAGAA-TCTACTGC-TCA-TAGATGTCAT  1046

seq1  GTGCTTTTGAGGGGGAACGTTGGTTAGGACTCTGACATG-CTTAAGAGAT  1097
      ||||||||||||||  |||||||  | |||||||||||| ||||||||| 
seq2  GTGCTTTTGAGGGG--ACGTTGG-AATGACTCTGACATGCCTTAAGAGA-  1092

seq1  TTTGTTAGC-ACCCAAAT-CTCTAGGGACTGTGGATGTAGTAGATGTTTC  1145
      |||| |||| |||||||| ||||| |  |||||  ||||||||||||| |
seq2  TTTGGTAGCAACCCAAATCCTCTA-GACCTGTGATTGTAGTAGATGTTCC  1141

seq1  ACAACAGTAAATATACCAGC  1165
      |||||||| ||| |||||||
seq2  ACAACAGTCAAT-TACCAGC  1160

seq1: chr14_6030506_6031553
seq2: B6Ng01-292E05.g_66_1115 (reverse)

seq1  TTAAT-CCAAAGTG-TCTGAGTCCTCACCACATGACATG-ACCA-GGGGA  46
      ||||| |||||||| |||||||||||||||||||||||| |||| |||||
seq2  TTAATCCCAAAGTGTTCTGAGTCCTCACCACATGACATGAACCAGGGGGA  50

seq1  GCATCCTTCTCTGTTGTTTTCATCAGAGACTCAAGTTACCTACAGTAATC  96
      |||| | ||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAT-CATCTCTGTTGTTTTCATCAGAGACTCAAGTTA-CTACAGTAATC  98

seq1  TGGAAGGTGAAGTGCTTCAACTCCCTTCCATGAAAGGAATAACACACTGA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTGAAGTGCTTCAACTCCCTTCCATGAAAGGAATAACACACTGA  148

seq1  TATTCCAATAGTGCCCACTCCTGGCATTCTTTGCCACTCAAAATGAAATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAATAGTGCCCACTCCTGGCATTCTTTGCCACTCAAAATGAAATT  198

seq1  AAATAGCTCCCAGAAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCTCCCAGAAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTC  248

seq1  AAACTAATCATCAGAAATTCTTGAATCTTTGTCTGACATTGACAAAGTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAATCATCAGAAATTCTTGAATCTTTGTCTGACATTGACAAAGTCC  298

seq1  AAGGCTTCAGCTTGTAAGACCTACTCCTGGACGGCCCAGCTCAAGCCTAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCAGCTTGTAAGACCTACTCCTGGACGGCCCAGCTCAAGCCTAC  348

seq1  CTCTACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCATTCTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCATTCTCC  398

seq1  ATAACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTC  448

seq1  TCTGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGACATAGCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGACATAGCCT  498

seq1  GAGCAGCCAGGAAAACATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAGGAAAACATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGG  548

seq1  ATGAACCACAGGCAGTTGCTGTCACCACAACACAGGTGACAACGCAGAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCACAGGCAGTTGCTGTCACCACAACACAGGTGACAACGCAGAAG  598

seq1  ATTCTAGTTCTCTCCGAGATACAAGAGATTCTCCAAGGAAGGCATTACTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTTCTCTCCGAGATACAAGAGATTCTCCAAGGAAGGCATTACTG  648

seq1  ATGATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTCCCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTCCCCA  698

seq1  GCTTGATCCTTTTCTGGGGTGCCTCTCCTGGAGCCTCTCATGGATCCGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATCCTTTTCTGGGGTGCCTCTCCTGGAGCCTCTCATGGATCCGTG  748

seq1  GGATCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAGAATTCTACTGCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAGAATTCTACTGCTT  798

seq1  CATTAGATGTCATGTGCTTTTGAGGGAGAACGTTGGTTAGGACTCTGACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGATGTCATGTGCTTTTGAGGGAGAACGTTGGTTAGGACTCTGACA  848

seq1  TGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGGACTGTGGATGTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGGGACTGTGGATGTAG  898

seq1  TAGATGTTTCACAACAATAAATATGCCACCTGAGCAATTCATGTGACATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTTCACAACAATAAATATGCCACCTGAGCAATTCATGTGACATA  948

seq1  CACTCCAATTACCCAGGGTTTTCCTGTCTCAAAGAGGCAAATATCTTTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAATTACCCAGGGTTTTCCTGTCTCAAAGAGGCAAATATCTTTCT  998

seq1  CCTATAGGTTTAATTGTACAAAACTTGGACAATATTTTCTAACGGTGAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGTTTAATTGTACAAAACTTGGACAATATTTTCTAACGGTGAAT  1048

seq1  TC  1048
      ||
seq2  TC  1050