BAC Information

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BAC

Clone NameB6Ng01-292G24
Chromosome14 (Build37)
Map Location 115,254,315 - 115,371,364
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
Downstream geneGpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292G24.bB6Ng01-292G24.g
ACCGA089077GA089078
length1,0081,109
definitionB6Ng01-292G24.b B6Ng01-292G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,370,786 - 115,371,364)(115,254,315 - 115,255,432)
sequence
gaattctcttcatggtattgatcattctcatcactatctgatttatttgg
cttcattcacttgatgtgaccttcaagagaacagagattatatgcatgtt
tgattaccatttccttctagttttctcagtggtaaatctccttactcatc
atttcagcaacttttctgacaatttccctgccttccctttcccattctgg
caagtcatcctttctgaatgagtctaacttctactttctatgtgccatat
ttgtcctcataagacttgctgggtgagattacataaccaagaaaattggt
accattaataatttgtagccatcacctcacctgggctcttgacactgcat
cttcatatataataatcttttttatccattttttattaggtatttagctc
atttacatttccaatgctataccaaaagtcccccatatccacccaccccc
actcccctgcccacccactccccctttttggccctggtgttcccctgtac
tggggcatataaagtttgcaagtccaatgggcctctctttccagtgatgg
ccgactaggccatcttttgatacatatgcagctagagacacgagctccag
gggtactggttagttcataatgttgttccacctatagggttgcagatccc
tttagctccttggctactttctctagctcctccattgggagccctatgat
ccatccattagctgactgtgagcatccacttctgtgtttgctaggccccg
gcatagtctcacaagagacagctacatctgggtcctttcaataaaatctt
gctagtgtatgcaatggtgtcagcgtttggatgctgattatggggtggat
ccctggatatggcagtctctacatggtccatcctttcatctcagctccaa
actttgtctctgtaactccttccatgggtgttttgttcccaaatctaaag
gaggggcatagtgtccacacttcagtcttcattcttcttgagtttcatgt
ggtttagc

gaattctgtagagaacactgaccaccacctgcaagttgatacatctgaat
ttatttgaccccgatgactccaataaaagggggacactcttctaattcac
aaaacagggaggcttctcaggcgagtgattaaattacctccttaacactt
aactctggttagaatgtggaacggggaagcttgaaccaaatgattgccta
attcctcagcaaagtaatgtgagcgtctacagcgttgccctccttccttc
cccaaacctttgttttccctgtttttcctacagaagaccttcctctgaat
atgtcttaattcataatttaactactcttttcttaacgtcactgttcttt
gtctttgacaacgggaagaatgcaagttcacaatttgttggaaaattggt
gttctaataaatctacccagaaaatcatccctgggccctggtaaatgtct
agcgacacaagcgtccatcaatcaagattcctttgttaaatgtctgagac
agaacaaagcttccagaggcctccctccaactgcaggtaagaggcaaatg
gacgggtcctcccgctaaatccttccaacctgaggaaatctgaggaggaa
agcagtcaatcagcgtgtcacaaaaggaccattgtttaaacacaaataaa
cctgtgtttaaataccatagttccaatttcctcaataatgaaggaaagag
aaaagacatgtgtactctccttacttgtatttatttggaattttttgtgt
ttccctttcttcgaacctgccacttttcaaacaggcaacaggaaatggag
gttaatagaatgacaggcttatagatccagataaataattaatggcccgg
agtaattagctggaagatgtttaatcattaatttgtgtgagtcatcaaaa
gcagtggagcctatccacaaaaatatcgtactaatgagaagtagatatat
ttgtcaagatggaaattaatatatgatgagattaagtactttgaaaatta
aatgtgggacaaattttatttgacccacttcactggctaagaaaaacttg
tctgcgttacttaatgaaatgaacttgtataaattccgtgatgtctgcat
tagcaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115370786_115371364
seq2: B6Ng01-292G24.b_46_624 (reverse)

seq1  GCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCC  50

seq1  CATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCC  100

seq1  AAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGG  150

seq1  ACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAA  200

seq1  ATGGATAAAAAAGATTATTATATATGAAGATGCAGTGTCAAGAGCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAAAAAGATTATTATATATGAAGATGCAGTGTCAAGAGCCCAGG  250

seq1  TGAGGTGATGGCTACAAATTATTAATGGTACCAATTTTCTTGGTTATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGATGGCTACAAATTATTAATGGTACCAATTTTCTTGGTTATGTA  300

seq1  ATCTCACCCAGCAAGTCTTATGAGGACAAATATGGCACATAGAAAGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACCCAGCAAGTCTTATGAGGACAAATATGGCACATAGAAAGTAGA  350

seq1  AGTTAGACTCATTCAGAAAGGATGACTTGCCAGAATGGGAAAGGGAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACTCATTCAGAAAGGATGACTTGCCAGAATGGGAAAGGGAAGGC  400

seq1  AGGGAAATTGTCAGAAAAGTTGCTGAAATGATGAGTAAGGAGATTTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATTGTCAGAAAAGTTGCTGAAATGATGAGTAAGGAGATTTACCA  450

seq1  CTGAGAAAACTAGAAGGAAATGGTAATCAAACATGCATATAATCTCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAACTAGAAGGAAATGGTAATCAAACATGCATATAATCTCTGTT  500

seq1  CTCTTGAAGGTCACATCAAGTGAATGAAGCCAAATAAATCAGATAGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAAGGTCACATCAAGTGAATGAAGCCAAATAAATCAGATAGTGAT  550

seq1  GAGAATGATCAATACCATGAAGAGAATTC  579
      |||||||||||||||||||||||||||||
seq2  GAGAATGATCAATACCATGAAGAGAATTC  579


seq1: chr14_115254315_115255432
seq2: B6Ng01-292G24.g_64_1172

seq1  GAATTCTGTAGAGAACACTGACCACCACCTGCAAGTTGATACATCTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGAGAACACTGACCACCACCTGCAAGTTGATACATCTGAAT  50

seq1  TTATTTGACCCCGATGACTCCAATAAAAGGGGGACACTCTTCTAATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGACCCCGATGACTCCAATAAAAGGGGGACACTCTTCTAATTCAC  100

seq1  AAAACAGGGAGGCTTCTCAGGCGAGTGATTAAATTACCTCCTTAACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGGAGGCTTCTCAGGCGAGTGATTAAATTACCTCCTTAACACTT  150

seq1  AACTCTGGTTAGAATGTGGAACGGGGAAGCTTGAACCAAATGATTGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGTTAGAATGTGGAACGGGGAAGCTTGAACCAAATGATTGCCTA  200

seq1  ATTCCTCAGCAAAGTAATGTGAGCGTCTACAGCGTTGCCCTCCTTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGCAAAGTAATGTGAGCGTCTACAGCGTTGCCCTCCTTCCTTC  250

seq1  CCCAAACCTTTGTTTTCCCTGTTTTTCCTACAGAAGACCTTCCTCTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACCTTTGTTTTCCCTGTTTTTCCTACAGAAGACCTTCCTCTGAAT  300

seq1  ATGTCTTAATTCATAATTTAACTACTCTTTTCTTAACGTCACTGTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAATTCATAATTTAACTACTCTTTTCTTAACGTCACTGTTCTTT  350

seq1  GTCTTTGACAACGGGAAGAATGCAAGTTCACAATTTGTTGGAAAATTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGACAACGGGAAGAATGCAAGTTCACAATTTGTTGGAAAATTGGT  400

seq1  GTTCTAATAAATCTACCCAGAAAATCATCCCTGGGCCCTGGTAAATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAATAAATCTACCCAGAAAATCATCCCTGGGCCCTGGTAAATGTCT  450

seq1  AGCGACACAAGCGTCCATCAATCAAGATTCCTTTGTTAAATGTCTGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACACAAGCGTCCATCAATCAAGATTCCTTTGTTAAATGTCTGAGAC  500

seq1  AGAACAAAGCTTCCAGAGGCCTCCCTCCAACTGCAGGTAAGAGGCAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAGCTTCCAGAGGCCTCCCTCCAACTGCAGGTAAGAGGCAAATG  550

seq1  GACGGGTCCTCCCGCTAAATCCTTCCAACCTGAGGAAATCTGAGGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGTCCTCCCGCTAAATCCTTCCAACCTGAGGAAATCTGAGGAGGAA  600

seq1  AGCAGTCAATCAGCGTGTCACAAAAGGACCATTGTTTAAACACAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCAATCAGCGTGTCACAAAAGGACCATTGTTTAAACACAAATAAA  650

seq1  CCTGTGTTTAAATACCATAGTTCCAATTTCCTCAATAATGAAGGAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTTAAATACCATAGTTCCAATTTCCTCAATAATGAAGGAAAGAG  700

seq1  AAAAGACATGTGTACTCTCCTTACTTGTATTTATTTGGAATTTTTTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATGTGTACTCTCCTTACTTGTATTTATTTGGAATTTTTTGTGT  750

seq1  TTCCCTTTCTTCGAACCTGCCACTTTTCAAACAGGCAACAGGAAATGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCTTCGAACCTGCCACTTTTCAAACAGGCAACAGGAAATGGAG  800

seq1  GTTAATAGAATGACAGGCTTATAGATCCAGATAAATAATTAATGGCCCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGAATGACAGGCTTATAGATCCAGATAAATAATTAATGGCCCGG  850

seq1  AGTAATTAGCTGGAAGATGTTTAATCATTAATTTGTGTGAGTCATCAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTAGCTGGAAGATGTTTAATCATTAATTTGTGTGAGTCATCAAAA  900

seq1  GCAGTGGAGCCTATCCACAAAAATATCGTACTAATGAGAAGTAGATATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCAGTGGAGCCTATCCACAAAAATATCGTACTAATGAGAAGTAGATATA-  949

seq1  TTTGTCAAGATGGAAATTAATATATGATGAGAATAAGTACTTTGAAAAAT  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||  
seq2  TTTGTCAAGATGGAAATTAATATATGATGAGATTAAGTACTTTGAAAA--  997

seq1  TAAAATGTGGGACAAA-TTTATTTGACCCACTTTCACTGGCTAAGGAAAA  1049
      | |||||||||||||| |||||||||||||| |||||||||||| |||||
seq2  TTAAATGTGGGACAAATTTTATTTGACCCAC-TTCACTGGCTAA-GAAAA  1045

seq1  ACTTGGTCTGCCTTTTACCTAATGAAATGAAACCTGTATAAATTCCGTGA  1099
      |||| ||||||   |||| |||||||||| ||| ||||||||||||||| 
seq2  ACTT-GTCTGC--GTTACTTAATGAAATG-AACTTGTATAAATTCCGTG-  1090

seq1  ATGTCTGCATTAGCAGGAT  1118
      |||||||||||||||||||
seq2  ATGTCTGCATTAGCAGGAT  1109


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