BAC Information

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BAC

Clone NameB6Ng01-292L19
Chromosome14 (Build37)
Map Location 42,705,891 - 42,706,921
singlet/doubletsinglet
Overlap geneLOC666233
Upstream geneSh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC100041930, EG666152
Downstream geneEG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292L19.bB6Ng01-292L19.g
ACCGA089298GA089299
length1,0401,160
definitionB6Ng01-292L19.b B6Ng01-292L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgaaatgcattgtttgcatttgcgacaatgttgcaatgtgca
cataatagatgctataacagcctatgtaataatacatggcagtacataat
attatacaaaagcttgaggcctgagttcagagtcctatcacccctatcta
aagcttctcatggagtcatgcacctgtaataacagcagtggggggacacc
taggcaaatccctgagtacactggggagtgtagccaattgctgaggtccc
tgatcagtgagagatctattcttcaaaattacaatgttactgtgtttgag
gcagattcccagtagtgacctctgacctcaacttgtatgcacaaccccac
accccttaaaagaacattgtcatgaagcattactgactaatgaattgatg
tcatcccttgtaaacttagtatgcttccttatgtcttcggcttccactct
gttcaaacaactttctgacagttcattgcttggtgtcttctctccaaaag
ttggtttctgcagagtaaattgaattatttctatttttttaatcatcttt
ttacactcaagattttatcctcctcccggtctactatctgactcttcccc
accccaaacctccatccagaccccgtctccacctggatgttcccacacca
tccacaactgtcaccacactagccctaccctcccttgggcctccagtctt
ttaagggttaggtggatcttctctgactgaacttagacctggtagtcctt
tgctgtatatgtgtttggggcctcataaacgctgatgaatgctgtctggt
tggtggttcagggtctgagaggtctcttggatccaggttaattgtgtctg
ctggtcctgccacagggtcaccctgcccctcagcatatgtgttcttttgg
gtccgagttacctcatggtccgagtagttcgacccatgtacatgcaatct
caggatgtccttttgcttcttagcttagtagtattccattggtaaatgac
attattttctatatccattcttctgttctgggtcatctgg
gaattcactggtcttaccatgttccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaagggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaagtaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaagccacgtaaccagttgcagaaatgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgtgtttgccat
tgtacgagggatagttatatcatgttaggcatatttacaaccttgttatt
gtttcatgtgaacatgagatattattgtgtcaagttgacaaggggttgga
ttgtagtggcttattccctgggttgtcaacttgacatatttgattgaact
acattccggaattgggagctcacagtgactcctttatctggagcttgaga
tcccttatctggaattcttggggtgagatctgagcccacagttgcttatg
gaattcgatgactgaatctctctgaattttacgtaaactcaacctcttaa
ttccgtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42705891_42706921
seq2: B6Ng01-292L19.b_44_1070

seq1  GAATTCTATGAAATGCATTGTTTGCATTTGCGACAATGTTGCAATGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAAATGCATTGTTTGCATTTGCGACAATGTTGCAATGTGCA  50

seq1  CATAATAGATGCTATAACAGCCTATGTAATAATACATGGCAGTACATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGATGCTATAACAGCCTATGTAATAATACATGGCAGTACATAAT  100

seq1  ATTATACAAAAGCTTGAGGCCTGAGTTCAGAGTCCTATCACCCCTATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAAAAGCTTGAGGCCTGAGTTCAGAGTCCTATCACCCCTATCTA  150

seq1  AAGCTTCTCATGGAGTCATGCACCTGTAATAACAGCAGTGGGGGGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTCATGGAGTCATGCACCTGTAATAACAGCAGTGGGGGGACACC  200

seq1  TAGGCAAATCCCTGAGTACACTGGGGAGTGTAGCCAATTGCTGAGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAATCCCTGAGTACACTGGGGAGTGTAGCCAATTGCTGAGGTCCC  250

seq1  TGATCAGTGAGAGATCTATTCTTCAAAATTACAATGTTACTGTGTTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTGAGAGATCTATTCTTCAAAATTACAATGTTACTGTGTTTGAG  300

seq1  GCAGATTCCCAGTAGTGACCTCTGACCTCAACTTGTATGCACAACCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTCCCAGTAGTGACCTCTGACCTCAACTTGTATGCACAACCCCAC  350

seq1  ACCCCTTAAAAGAACATTGTCATGAAGCATTACTGACTAATGAATTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTAAAAGAACATTGTCATGAAGCATTACTGACTAATGAATTGATG  400

seq1  TCATCCCTTGTAAACTTAGTATGCTTCCTTATGTCTTCGGCTTCCACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTTGTAAACTTAGTATGCTTCCTTATGTCTTCGGCTTCCACTCT  450

seq1  GTTCAAACAACTTTCTGACAGTTCATTGCTTGGTGTCTTCTCTCCAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAACAACTTTCTGACAGTTCATTGCTTGGTGTCTTCTCTCCAAAAG  500

seq1  TTGGTTTCTGCAGAGTAAATTGAATTATTTCTATTTTTTTAATCATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTGCAGAGTAAATTGAATTATTTCTATTTTTTTAATCATCTTT  550

seq1  TTACACTCAAGATTTTATCCTCCTCCCGGTCTACTATCTGACTCTTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTCAAGATTTTATCCTCCTCCCGGTCTACTATCTGACTCTTCCCC  600

seq1  ACCCCAAACCTCCATCCAGACCCCGTCTCCACCTGGATGTTCCCACACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAACCTCCATCCAGACCCCGTCTCCACCTGGATGTTCCCACACCA  650

seq1  TCCACAACTGTCACCACACTAGCCCTACCCTCCCTTGGGCCTCCAGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAACTGTCACCACACTAGCCCTACCCTCCCTTGGGCCTCCAGTCTT  700

seq1  TTAAGGGTTAGGTGGATCTTCTCTGACTGAACTTAGACCTGGTAGTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTTAGGTGGATCTTCTCTGACTGAACTTAGACCTGGTAGTCCTT  750

seq1  TGCTGTATATGTGTTTGGGGCCTCATAAACGCTGATGAATGCTGTCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTATATGTGTTTGGGGCCTCATAAACGCTGATGAATGCTGTCTGGT  800

seq1  TGGTGGTTCAGGGTCTGAGAGGTCTCTTGGATCCAGGTTAATTGTGTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTTCAGGGTCTGAGAGGTCTCTTGGATCCAGGTTAATTGTGTCTG  850

seq1  CTGGTCCTGCCACAGGGTCACCCTGCCCCTCAGCATATGTGTTCTTTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCTGCCACAGGGTCACCCTGCCCCTCAGCATATGTGTTCTTTTGG  900

seq1  GTCCGAGTTACCTCATGGTCCGAGTAGTTCGACCCATGTACATGCAAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCCGAGTTACCTCATGGTCCGAGTAGTTCGACCCATGTACATGC-AATC  949

seq1  TCAGGATGTCCTTTTGCTTCTTAGCTTAGTAGTATTCCATTGGGTAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCAGGATGTCCTTTTGCTTCTTAGCTTAGTAGTATTCCATT-GGTAAATG  998

seq1  AACCATTATTTTCTATATCCATTCTTCTGTT  1031
      |  ||||||||||||||||||||||||||||
seq2  A--CATTATTTTCTATATCCATTCTTCTGTT  1027