BAC Information

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BAC

Clone NameB6Ng01-293E05
Chromosome14 (Build37)
Map Location 43,923,909 - 43,924,985
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471
Downstream geneLOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293E05.bB6Ng01-293E05.g
ACCGA089688GA089689
length1,1881,072
definitionB6Ng01-293E05.b B6Ng01-293E05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaagatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactaaaaacatccagcaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatataa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaacggaaaaagatcaag
taacatataaaggcaagcctaccagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaaccaata
caggacggaaccacgccctagaaaaaacaagaagatatccctcaacaacc
taaaagaagacagccacagaacagaatgccacttaacacaaaaataacag
gaagcaacatacttctaatatctctaatatcatgactcatcctcaataaa
aaagaactagacctaaccgactgcctacagaacggatccactcgctgcta
acgaatcccatctcaggaaaaagaacggacaccctatc
gaattcagaaaagaaggaagcacaagataatctcttttaactctggagag
cccaaataacttaaattctaatctccctatgtagattaaatgaacaatgg
ctccagtcactgttacaatgaacttccactatactttaaggtatatatga
tttcttaaaatcaggcagtaggcatttgtggtgcatgattttacctaaat
ctcccaaggacagcctggtgtatggagtgaggtacagaccagctaggaat
aaacacagaaacactgtctcaaaaacaccatgagagagagacagagacaa
agacagaaacagagacagacacagagacagagaatgagacagagtgagac
agagacagagagacagagatcgacagagaaagagagaaacagagagacag
aggcacacagaaacataattaagggacacagagagagacagaaagagagc
cataatctcactctggtctagactattcccatgaggagaacacaggaggt
attcacctaccttgcattactaataagatcataaattatttgaacataaa
ctgagtcatggactgagttgggaaagatacagcagatctctgctttgcac
acagaagcttcagtcttgacaatatctctgtgaaaaaaaaccaaaacgtt
gttctcatcacactcagaagaaacttttgatacaagatggcacccattta
caggtttctaaaaaggaaatctagtttagttccttaacttgataagaggc
ctcaaccagaaacacacaccttagtcaggaatcagagcattttctttaga
gagggaactttgacagaagatttccatcattggttccatttaaccagtta
ggtccaagaaaaagaaagcaacattctttttcttggtgggaaaaattaaa
tcattgttacacaatgatatcattacttacatactaacttaagagaaggt
aaagggtaaattattttagacttgaagcacttactacttttagaaatgaa
gaagtggttctaattattgatattcaaatatataggttgctatggatcga
aggtcagcttgaccaagttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43923909_43924985
seq2: B6Ng01-293E05.g_67_1138

seq1  GAATTCAGAAAAGAAGGAAGCACAAGATAATCTCTTTTAACTCTGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAAGAAGGAAGCACAAGATAATCTCTTTTAACTCTGGAGAG  50

seq1  CCCAAATAACTTAAATTCTAATCTCCCTATGTAGATTAAATGAACAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATAACTTAAATTCTAATCTCCCTATGTAGATTAAATGAACAATGG  100

seq1  CTCCAGTCACTGTTACAATGAACTTCCACTATACTTTAAGGTATATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCACTGTTACAATGAACTTCCACTATACTTTAAGGTATATATGA  150

seq1  TTTCTTAAAATCAGGCAGTAGGCATTTGTGGTGCATGATTTTACCTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAAATCAGGCAGTAGGCATTTGTGGTGCATGATTTTACCTAAAT  200

seq1  CTCCCAAGGACAGCCTGGTGTATGGAGTGAGGTACAGACCAGCTAGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGGACAGCCTGGTGTATGGAGTGAGGTACAGACCAGCTAGGAAT  250

seq1  AAACACAGAAACACTGTCTCAAAAACACCATGAGAGAGAGACAGAGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGAAACACTGTCTCAAAAACACCATGAGAGAGAGACAGAGACAA  300

seq1  AGACAGAAACAGAGACAGACACAGAGACAGAGAATGAGACAGAGTGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAACAGAGACAGACACAGAGACAGAGAATGAGACAGAGTGAGAC  350

seq1  AGAGACAGAGAGACAGAGATCGACAGAGAAAGAGAGAAACAGAGAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGAGACAGAGATCGACAGAGAAAGAGAGAAACAGAGAGACAG  400

seq1  AGGCACACAGAAACATAATTAAGGGACACAGAGAGAGACAGAAAGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACAGAAACATAATTAAGGGACACAGAGAGAGACAGAAAGAGAGC  450

seq1  CATAATCTCACTCTGGTCTAGACTATTCCCATGAGGAGAACACAGGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTCACTCTGGTCTAGACTATTCCCATGAGGAGAACACAGGAGGT  500

seq1  ATTCACCTACCTTGCATTACTAATAAGATCATAAATTATTTGAACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCTACCTTGCATTACTAATAAGATCATAAATTATTTGAACATAAA  550

seq1  CTGAGTCATGGACTGAGTTGGGAAAGATACAGCAGATCTCTGCTTTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCATGGACTGAGTTGGGAAAGATACAGCAGATCTCTGCTTTGCAC  600

seq1  ACAGAAGCTTCAGTCTTGACAATATCTCTGTGAAAAAAAACCAAAACGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCTTCAGTCTTGACAATATCTCTGTGAAAAAAAACCAAAACGTT  650

seq1  GTTCTCATCACACTCAGAAGAAACTTTTGATACAAGATGGCACCCATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATCACACTCAGAAGAAACTTTTGATACAAGATGGCACCCATTTA  700

seq1  CAGGTTTCTAAAAAGGAAATCTAGTTTAGTTCCTTAACTTGATAAGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCTAAAAAGGAAATCTAGTTTAGTTCCTTAACTTGATAAGAGGC  750

seq1  CTCAACCAGAAACACACACCTTAGTCAGGAATCAGGAGCATTTTCTTTAG  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCAACCAGAAACACACACCTTAGTCAGGAATCA-GAGCATTTTCTTTAG  799

seq1  AGAGGGAACTTTGACAGAAGATTTCCATCATTGGTTCCATTTAACCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGGGAACTTTGACAGAAGATTTCCATCATTGGTTCCATTTAACCAGTT  849

seq1  AGGTCCAAGAAAAAGAAAGCAACATTCTTTTTCTTGGTGGGAAAAATTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAAGAAAAAGAAAGCAACATTCTTTTTCTTGGTGGGAAAAATTAA  899

seq1  ATCATTGTTACACAATGATATCATTACTTACATACTAACTTAAGAGAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTTACACAATGATATCATTACTTACATACTAACTTAAGAGAAGG  949

seq1  TAAA-GGTAAATTATTTTAGACTTGAAGCACTTACTACTTTTAGAAATGA  999
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGTAAATTATTTTAGACTTGAAGCACTTACTACTTTTAGAAATGA  999

seq1  AGAAGTGGTTCTTAATTATTGATATTCAAATATATAGGGTTGCTATTGGG  1049
      ||||||||||| |||||||||||||||||||||||| |||||||||  ||
seq2  AGAAGTGGTTC-TAATTATTGATATTCAAATATATA-GGTTGCTAT--GG  1045

seq1  ATCGAAAGTCAACCTTGACCAAGTTAGT  1077
      |||||| ||| | |||||||||||||||
seq2  ATCGAAGGTC-AGCTTGACCAAGTTAGT  1072