BAC Information

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BAC

Clone NameB6Ng01-294B17
Chromosome14 (Build37)
Map Location 29,975,090 - 30,100,171
singlet/doubletdoublet
Overlap geneCacna2d3, Ppia-ps15
Upstream geneErc2, LOC100040206, Wnt5a, LOC100040218, Lrtm1
Downstream geneEG665431, Selk, Actr8, Il17rb, Chdh, Cacna1d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294B17.bB6Ng01-294B17.g
ACCGA090321GA090322
length238382
definitionB6Ng01-294B17.b B6Ng01-294B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,975,090 - 29,975,327)(30,099,784 - 30,100,171)
sequence
acagccctagctgatctgtttctataacagggtcttttctgagccatacc
tggtggaataaatgccaagcagcctgggctacagagatgtgctcagaaat
gtaaacccacccacataaacaccaaattagtgcctatagtgtttgaattg
tgatagcataatatataaagccagggcttggagaccaggttttaacagat
tgctggtgaggtgggtataagttgggatgttgggggcg

tctgttaacttcctcttcattccccagaccctggatttccttcgataaat
aatcagttttaacctgatcccttgtggcctcaattcttaagatgacactg
acacctggagaccaatttttactgtgtgcagaatgttagccgttttaaac
ctttcaggtgccactgtatgagatgagaacactctttttctttctttttc
tttttctttttctttctctttttctttctctttttctctttctgtctgtc
ttccttcattctttccttcctttcttcctttctttcttcctttctttctt
tctttctttctttctttctctctttctctctttctctctttctctctttc
tctctttctctctttctctctttctctctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29975090_29975327
seq2: B6Ng01-294B17.b_52_289

seq1  ACAGCCCTAGCTGATCTGTTTCTATAACAGGGTCTTTTCTGAGCCATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCTAGCTGATCTGTTTCTATAACAGGGTCTTTTCTGAGCCATACC  50

seq1  TGGTGGAATAAATGCCAAGCAGCCTGGGCTACAGAGATGTGCTCAGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAATAAATGCCAAGCAGCCTGGGCTACAGAGATGTGCTCAGAAAT  100

seq1  GTAAACCCACCCACATAAACACCAAATTAGTGCCTATAGTGTTTGAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCACCCACATAAACACCAAATTAGTGCCTATAGTGTTTGAATTG  150

seq1  TGATAGCATAATATATAAAGCCAGGGCTTGGAGACCAGGTTTTAACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCATAATATATAAAGCCAGGGCTTGGAGACCAGGTTTTAACAGAT  200

seq1  TGCTGGTGAGGTGGGTATAAGTTGGGATGTGGGGGGCG  238
      |||||||||||||||||||||||||||||| |||||||
seq2  TGCTGGTGAGGTGGGTATAAGTTGGGATGTTGGGGGCG  238


seq1: chr14_30099784_30100171
seq2: B6Ng01-294B17.g_69_456 (reverse)

seq1  GAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGA  50

seq1  AAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAA  100

seq1  GAAAGGAAGAAAGGAAGGAAAGAATGAAGGAAGACAGACAGAAAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGAAAGGAAGGAAAGAATGAAGGAAGACAGACAGAAAGAGAAA  150

seq1  AAGAGAAAGAAAAAGAGAAAGAAAAAGAAAAAGAAAAAGAAAGAAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAGAAAAAGAGAAAGAAAAAGAAAAAGAAAAAGAAAGAAAAAGA  200

seq1  GTGTTCTCATCTCATACAGTGGCACCTGAAAGGTTTAAAACGGCTAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCATCTCATACAGTGGCACCTGAAAGGTTTAAAACGGCTAACAT  250

seq1  TCTGCACACAGTAAAAATTGGTCTCCAGGTGTCAGTGTCATCTTAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACAGTAAAAATTGGTCTCCAGGTGTCAGTGTCATCTTAAGAAT  300

seq1  TGAGGCCACAAGGGATCAGGTTAAAACTGATTATTTATCGAAGGAAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCACAAGGGATCAGGTTAAAACTGATTATTTATCGAAGGAAATCC  350

seq1  AGGGTCTGGGGAATGAAGAGGAAGTTAACAGAGAATTC  388
      ||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGGGGAATGAAGAGGAAGTTAACAGAGAATTC  388


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