BAC Information

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BAC

Clone NameB6Ng01-294C24
Chromosome14 (Build37)
Map Location 28,847,394 - 28,978,324
singlet/doubletdoublet
Overlap geneErc2
Upstream geneIl17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294C24.bB6Ng01-294C24.g
ACCGA090379GA090380
length1,1801,160
definitionB6Ng01-294C24.b B6Ng01-294C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,977,131 - 28,978,324)(28,847,394 - 28,848,555)
sequence
gaattcatatgctccaccaagaggctgggctccacagcgcaggcgcagtg
cactcacccctacacccacctcccatttttcttttctttcctccctttca
aatacttttcccccgttttagatatacacagtaagctgttctcctgagca
aaacagcatgaacccacaacgttttaatcgctcaaagcataattaggacc
ctctaaacatttactgagcaagtcgctctgaataaaggcaaccagaatct
ctgaaagctgctcacagacctgaaatgttgtcctgtcaaagacatacttt
gcattctgtctaagctgcctgtcaagttcaaaggcctctccagctatcga
ggcataagtgggaggcgctggtgaaatacccaagcccacgtttgtcatgg
ttgccaagatccggcaggtttcttaccttctctcctaattagattacctt
tctagtccacagactaacagaaagcgcacagtacactaaacgtgctgtga
caacagggacaggattgagggagacctttctgggaaagtgtgaaagaaaa
tgatcctcctaacacctctgggcacatggggaagaggcaatgctgtgggt
gatgtcctgctgcaagggggcgggaatccctggcatcttagacacaaccc
aaaagacattaactccccctaccccaagtaggaagccaggcaggggctct
ctttaacattcattatttttaactgtgctccttgacaaaatccacccaga
gcaaacactggcctgcgctcaactttctttcatgctctctgaaagcttaa
ttggttctaacgagatcaaaagttgttttccccctttggcatgtatctgt
attgtttctgagctatttggaagttgctggacaccaaaggcagatccatc
attcttggggcaactccattcctagggtgattccaggccacatctcctgc
accatgcatctcatgcatgtcagagaagcaagttgctctgaataaaggcc
cccaaaacagcacaaagttccttcttaccacctgagagcagcaaacagac
cacagagtctgctaccctagattgtgcccagcaaaccattcccgtgaatg
caaggccagcagaggactcagaaaaacattctagcttggaaatgatccgg
aacctcagcactgtctgagttttcagacac
gaattctctgttgactgtgtcatttcagggctatgcattcctagggacat
agtgtactgattacaaatgccttcgtgactattgtttagtcttagcaatt
ttctttttaaaaaaagtctatttctgaaaactatttgattcactcttaaa
ccagtatcctgtggcaaaaaagaaaattctatatgcttagcacattttaa
aaccctttaaataaaaatgtaattactaacataattcccctgagaactaa
aagcaatatgtagacagaaaattacaactatatataactacttaaaatct
acttcagggaatatagatggtacaggcaaacacgtatccagcaattgatg
taggcattcaatgtcaaaagaactcaagtaatatactaaatgacataata
atgtaaagttacatgtttaatttcagaatgtctaggtaatacctttagtt
ctcaatgttgctaatttttataaattccaggaaaattatgttaataatta
cattttataataaagggctttaaaatgtgctaagtatacagattttattt
tgtatttttttgagtatttgtttatatttatttatatgtatcatatttgt
tttatctatgaaaataaatttttggcaggtttaaaatgcagattgtgaat
gttctgaatttagttagtttgaattttaagaagtataatttcttttgaaa
tgatgaaacacaagattccaagatttaccattactttcaaaatatattac
ctagggccaataattatgtctggtatttactcatttttagttgaaagaaa
atttaagttttataatatgttatagttctggaattatagtcagaaaattt
aatgagtctattttgttcatgatttagaattatgtcaatgtctgaaatag
tttacacccccatcctgctattaagatatgaaaggaatgttgaaacactg
tctatgggaagccagacagcaaagtactgtaacggagagtcatattttca
cagtgcataagcttagtaagttactgctgaaggtctaggggcagcgtgga
tgagacatcaacagcttcaatgactaagagttggcttgggattttaggtt
taccactatcattgttttgaggcaatacctttattaaaaatgttaggcca
tttccaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28977131_28978324
seq2: B6Ng01-294C24.b_47_1226 (reverse)

seq1  GTGTGCTGAAAAACCCAAACAGTGCTGA-GTTCTGGATCATCT-CAAGCT  48
      |||| ||| ||||| || |||||||||| |||| ||||||| | ||||| 
seq2  GTGT-CTG-AAAACTCAGACAGTGCTGAGGTTCCGGATCATTTCCAAGC-  47

seq1  TAGAATGTTTTTCCTGAGTCTTCTGGCTTGGCCTTGCCATTTCCACGGGG  98
      |||||||||||| ||||||| ||||   |||||||| ||||  ||| |||
seq2  TAGAATGTTTTT-CTGAGTCCTCTG--CTGGCCTTG-CATT--CAC-GGG  90

seq1  AATGGTTTGCTGGGGCACAATCTTAGGGGTAGCAGGACTCTGTGGTCTGT  148
      ||||||||||| |||||||||||   |||||||| |||||||||||||||
seq2  AATGGTTTGCT-GGGCACAATCT--AGGGTAGCA-GACTCTGTGGTCTGT  136

seq1  TTGCTGCTCTTCAGGTGGTAAGAAGGAACTTTGTGCTGTTTTGGGGGCCT  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTC-TCAGGTGGTAAGAAGGAACTTTGTGCTGTTTTGGGGGCCT  185

seq1  TTATTCAGAGCAACTTGCTTCTCTGACATGCATGAGATGCATGGTGCAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAGAGCAACTTGCTTCTCTGACATGCATGAGATGCATGGTGCAGG  235

seq1  AGATGTGGCCTGGAATCACCCCTAGGAATGGAGTTGCCCCAAGAATGATG  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGATGTGGCCTGGAATCA-CCCTAGGAATGGAGTTGCCCCAAGAATGATG  284

seq1  GATCTGCCTTTGGTGTCCAGCAACTTCCAAATAGCTCAGAAACAATACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTTTGGTGTCCAGCAACTTCCAAATAGCTCAGAAACAATACAG  334

seq1  ATACATGCCAAAGGGGGAAAACAACTTTTGATCTCGTTAGAACCAATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCCAAAGGGGGAAAACAACTTTTGATCTCGTTAGAACCAATTAA  384

seq1  GCTTTCAGAGAGCATGAAAGAAAGTTGAGCGCAGGCCAGTGTTTGCTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGAGAGCATGAAAGAAAGTTGAGCGCAGGCCAGTGTTTGCTCTG  434

seq1  GGTGGATTTTGTCAAGGAGCACAGTTAAAAATAATGAATGTTAAAGAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTTTGTCAAGGAGCACAGTTAAAAATAATGAATGTTAAAGAGAG  484

seq1  CCCCTGCCTGGCTTCCTACTTGGGGTAGGGGGAGTTAATGTCTTTTGGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCTGGCTTCCTACTTGGGGTAGGGGGAGTTAATGTCTTTTGGGT  534

seq1  TGTGTCTAAGATGCCAGGGATTCCCGCCCCCTTGCAGCAGGACATCACCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTAAGATGCCAGGGATTCCCGCCCCCTTGCAGCAGGACATCACCC  584

seq1  ACAGCATTGCCTCTTCCCCATGTGCCCAGAGGTGTTAGGAGGATCATTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTGCCTCTTCCCCATGTGCCCAGAGGTGTTAGGAGGATCATTTT  634

seq1  CTTTCACACTTTCCCAGAAAGGTCTCCCTCAATCCTGTCCCTGTTGTCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACACTTTCCCAGAAAGGTCTCCCTCAATCCTGTCCCTGTTGTCAC  684

seq1  AGCACGTTTAGTGTACTGTGCGCTTTCTGTTAGTCTGTGGACTAGAAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTTTAGTGTACTGTGCGCTTTCTGTTAGTCTGTGGACTAGAAAGG  734

seq1  TAATCTAATTAGGAGAGAAGGTAAGAAACCTGCCGGATCTTGGCAACCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAATTAGGAGAGAAGGTAAGAAACCTGCCGGATCTTGGCAACCAT  784

seq1  GACAAACGTGGGCTTGGGTATTTCACCAGCGCCTCCCACTTATGCCTCGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACGTGGGCTTGGGTATTTCACCAGCGCCTCCCACTTATGCCTCGA  834

seq1  TAGCTGGAGAGGCCTTTGAACTTGACAGGCAGCTTAGACAGAATGCAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGAGAGGCCTTTGAACTTGACAGGCAGCTTAGACAGAATGCAAAG  884

seq1  TATGTCTTTGACAGGACAACATTTCAGGTCTGTGAGCAGCTTTCAGAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTGACAGGACAACATTTCAGGTCTGTGAGCAGCTTTCAGAGAT  934

seq1  TCTGGTTGCCTTTATTCAGAGCGACTTGCTCAGTAAATGTTTAGAGGGTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGCCTTTATTCAGAGCGACTTGCTCAGTAAATGTTTAGAGGGTC  984

seq1  CTAATTATGCTTTGAGCGATTAAAACGTTGTGGGTTCATGCTGTTTTGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATGCTTTGAGCGATTAAAACGTTGTGGGTTCATGCTGTTTTGCT  1034

seq1  CAGGAGAACAGCTTACTGTGTATATCTAAAACGGGGGAAAAGTATTTGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAACAGCTTACTGTGTATATCTAAAACGGGGGAAAAGTATTTGAA  1084

seq1  AGGGAGGAAAGAAAAGAAAAATGGGAGGTGGGTGTAGGGGTGAGTGCACT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAAAGAAAAGAAAAATGGGAGGTGGGTGTAGGGGTGAGTGCACT  1134

seq1  GCGCCTGCGCTGTGGAGCCCAGCCTCTTGGTGGAGCATATGAATTC  1194
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGCGCTGTGGAGCCCAGCCTCTTGGTGGAGCATATGAATTC  1180

seq1: chr14_28847394_28848555
seq2: B6Ng01-294C24.g_63_1222

seq1  GAATTCTCTGTTGACTGTGTCATTTCAGGGCTATGCATTCCTAGGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTGACTGTGTCATTTCAGGGCTATGCATTCCTAGGGACAT  50

seq1  AGTGTACTGATTACAAATGCCTTCGTGACTATTGTTTAGTCTTAGCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTGATTACAAATGCCTTCGTGACTATTGTTTAGTCTTAGCAATT  100

seq1  TTCTTTTTAAAAAAAGTCTATTTCTGAAAACTATTTGATTCACTCTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAAAAAAAGTCTATTTCTGAAAACTATTTGATTCACTCTTAAA  150

seq1  CCAGTATCCTGTGGCAAAAAAGAAAATTCTATATGCTTAGCACATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATCCTGTGGCAAAAAAGAAAATTCTATATGCTTAGCACATTTTAA  200

seq1  AACCCTTTAAATAAAAATGTAATTACTAACATAATTCCCCTGAGAACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTAAATAAAAATGTAATTACTAACATAATTCCCCTGAGAACTAA  250

seq1  AAGCAATATGTAGACAGAAAATTACAACTATATATAACTACTTAAAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATATGTAGACAGAAAATTACAACTATATATAACTACTTAAAATCT  300

seq1  ACTTCAGGGAATATAGATGGTACAGGCAAACACGTATCCAGCAATTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGGAATATAGATGGTACAGGCAAACACGTATCCAGCAATTGATG  350

seq1  TAGGCATTCAATGTCAAAAGAACTCAAGTAATATACTAAATGACATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTCAATGTCAAAAGAACTCAAGTAATATACTAAATGACATAATA  400

seq1  ATGTAAAGTTACATGTTTAATTTCAGAATGTCTAGGTAATACCTTTAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGTTACATGTTTAATTTCAGAATGTCTAGGTAATACCTTTAGTT  450

seq1  CTCAATGTTGCTAATTTTTATAAATTCCAGGAAAATTATGTTAATAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTTGCTAATTTTTATAAATTCCAGGAAAATTATGTTAATAATTA  500

seq1  CATTTTATAATAAAGGGCTTTAAAATGTGCTAAGTATACAGATTTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATAATAAAGGGCTTTAAAATGTGCTAAGTATACAGATTTTATTT  550

seq1  TGTATTTTTTTGAGTATTTGTTTATATTTATTTATATGTATCATATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTTTGAGTATTTGTTTATATTTATTTATATGTATCATATTTGT  600

seq1  TTTATCTATGAAAATAAATTTTTGGCAGGTTTAAAATGCAGATTGTGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATGAAAATAAATTTTTGGCAGGTTTAAAATGCAGATTGTGAAT  650

seq1  GTTCTGAATTTAGTTAGTTTGAATTTTAAGAAGTATAATTTCTTTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAATTTAGTTAGTTTGAATTTTAAGAAGTATAATTTCTTTTGAAA  700

seq1  TGATGAAACACAAGATTCCAAGATTTACCATTACTTTCAAAATATATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAACACAAGATTCCAAGATTTACCATTACTTTCAAAATATATTAC  750

seq1  CTAGGGCCAATAATTATGTCTGGTATTTACTCATTTTTAGTTGAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCCAATAATTATGTCTGGTATTTACTCATTTTTAGTTGAAAGAAA  800

seq1  ATTTAAGTTTTATAATATGTTATAGTTCTGGAATTATAGTCAGAAAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTTTATAATATGTTATAGTTCTGGAATTATAGTCAGAAAATTT  850

seq1  AATGAGTCTATTTTGTTCATGATTTAGAATTATGTCAATGTCTGAAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCTATTTTGTTCATGATTTAGAATTATGTCAATGTCTGAAATAG  900

seq1  TTTACA-CCCCATCCTGCTATTAAGATATGAAAGGAATGTTGAAACACTG  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACCCCCATCCTGCTATTAAGATATGAAAGGAATGTTGAAACACTG  950

seq1  TCTAT-GGAAGCCAGACAGCAAAGTACTGTAACGGAGAGTCATATTTTCA  998
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGGAAGCCAGACAGCAAAGTACTGTAACGGAGAGTCATATTTTCA  1000

seq1  CAGTGCATAAGCTTAGTAAGTTACTGCTGAA-GTCTAGGGGCAGCGTGGA  1047
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGTGCATAAGCTTAGTAAGTTACTGCTGAAGGTCTAGGGGCAGCGTGGA  1050

seq1  TGAGACATCAACAGCTTC-ATGACTAAGAGTTGGCTT-GGATTTTAGG-T  1094
      |||||||||||||||||| |||||||||||||||||| |||||||||| |
seq2  TGAGACATCAACAGCTTCAATGACTAAGAGTTGGCTTGGGATTTTAGGTT  1100

seq1  TACAACTAATCATTTGTTTTGAGGGAAATAACTTTTTATTAAAAAATTGT  1144
      ||| ||| |||| ||||||||| || |||| |  |||||||||||  |||
seq2  TACCACT-ATCA-TTGTTTTGA-GGCAATACC--TTTATTAAAAA--TGT  1143

seq1  TAGGGCCCATTT-CAAAGG  1162
      ||||  |||||| ||||||
seq2  TAGG--CCATTTCCAAAGG  1160