BAC Information

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BAC

Clone NameB6Ng01-294I02
Chromosome14 (Build37)
Map Location 110,097,966 - 110,098,622
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk1, LOC640892
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294I02.bB6Ng01-294I02.g
ACCGA090614GA090615
length1,1031,181
definitionB6Ng01-294I02.b B6Ng01-294I02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacaggatcatctttaagaattaagaaatcatctatttgttaa
tatagcatcaatacaagacagtacaacttcatagatctgcaaagatctgt
tcaaaagagatgtgataaacctagtgactattatatatgtttaataataa
taggaaaagtacattaatagcaggaatctttcctaaaacaaattctcttg
agcctttcctatggagcaaacctgtcacagattctaatccaatgcaaacc
atctcagcaagattacctactagatattagcttgtcctatgataactcct
gacatccattcataatgaaagccccagagaaattaggaataaaaggcaaa
taccttggggctggagagatggctcagcagttaagagtagtgactgctct
tccagaggtcctgagtttaattcccaaaaaatacatctataaagggatca
gatgacctcttctggtgtgtttgaaaagagcaacagtatactcatattca
ttaaataaataaatatatatataaatacttctaaaaaaactaaaagaaaa
agaaaaacacctcaacataagaaaagctttataaacaaatatattcaaga
aaaaaactcaaagcatattgtttcagagataaaatgaaatattggtgtct
actttttattcttgttaaatataatattaaattttaaatagagcaataat
gcaaagaaataaaacagatagaagtaagaattggcagcattaatttgttc
ccatttatagactacttgatctcatgtctaaaatacaaaagatcacagga
gaaaaaaaatcttatatctgatactttaaaattatagaacacaaaataca
cacaaatcaatagtctccagctatgcattccgataaaataaatccagaac
attaatattattcatagtgaattaaatacaaagtaaatataaaaggatac
ataaaaactacacccaaacatttgctgaacaactctataactttcaagtg
ccaaggactcatgtgttgcacaggagttcatgcagcacaagtgcacatgc
acataaaaatttaaaaaataaatacgtaacaaatgagctattataattac
cta
gaattctggacgaaattcaaaacagtctatcagaggtaaagcggggagag
agagagcaggagcaaagaggaaacatggtgcaccaaataagcatacaggc
ctttccacgggtctcgaacccaaggaaaagatcatttcagggaagaatac
ctggggagagtttggaaggaaggagaaggaaaaagagaagaaaaaagatc
aatcagcggaggtttctaggaggagactatactcgccactagatgagttt
aagcagctagctcttagtagctcagaatcagatgaaggacttagctcctc
tgaagaaacggacttggaggagtaagcagtttgttaaaaggtaccagcaa
gataaaatgcaagctactcagtccagaaaaaggcaaaaagtggctggcga
aggccagcttgctgcttggcctctggactgtcagcttcagggtcctagtg
cacctctgcgatatgtgcagaggtaccattcagaatcttatgtgcagagg
taccattcagacttgttcattccagaacagaggaaaatgcaacagacatt
tccagtttttgagggagctgagggtgggcgtgttcacactccggtaaagt
atatacagattaaggagcttgcagaagcagtccacaattatggagtcagt
gctaatttcactttagcacaagtcgaaaggcttgcgaatcacgctatgac
tcctggtgattggcagactgtagtaaaagctgcagcccccagtatgggaa
tgtatcttgagtggaaagccttgtggcaggactcccgccagacgcagtca
agggccaatgccaccatgaaaggggaccaaagaacatggacgtttgaatt
gcttacaggtcagggacggcatgctactaaacagacagattatcattggg
gagcatacgctcaaatctcagctaccgctgttaaggcatgggaaggcact
ctctaggaaggggaggcagtggacatttgaacaaaatcatccagtgcaca
ggagtcatctcagactttgtggcagatgacgagcagcagggaggatattt
tgggtgaccccgaggcagctatgccttaattgaacagcctgggttatgac
caggctacctcggaaattgcgaatcagcaattccaaccttgacaaggatt
agggtttacaggaacctgtgtttaaaggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110097966_110098622
seq2: B6Ng01-294I02.b_488_1149

seq1  AAGGGATCAGATGACCTCTTCTGGTGTGTTTGAAAAGAGCAACAGTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATCAGATGACCTCTTCTGGTGTGTTTGAAAAGAGCAACAGTATAC  50

seq1  TCATATTCATTAAATAAATAAATATATATATAAATACTTCTAAAAAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTCATTAAATAAATAAATATATATATAAATACTTCTAAAAAAACT  100

seq1  AAAAGAAAAAGAAAAACACCTCAACATAAGAAAAGCTTTATAAACAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAGAAAAACACCTCAACATAAGAAAAGCTTTATAAACAAATA  150

seq1  TATTCAAGAAAAAAACTCAAAGCATATTGTTTCAGAGATAAAATGAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAGAAAAAAACTCAAAGCATATTGTTTCAGAGATAAAATGAAATA  200

seq1  TTGGTGTCTACTTTTTATTCTTGTTAAATATAATATTAAATTTTAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTCTACTTTTTATTCTTGTTAAATATAATATTAAATTTTAAATAG  250

seq1  AGCAATAATGCAAAGAAATAAAACAGATAGAAGTAAGAATTGGCAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAATGCAAAGAAATAAAACAGATAGAAGTAAGAATTGGCAGCATT  300

seq1  AATTTGTTCCCATTTATAGACTACTTGATCTCATGTCTAAAATACAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTCCCATTTATAGACTACTTGATCTCATGTCTAAAATACAAAAG  350

seq1  ATCACAGGAGAAAAAAAATCTTATATCTGATACTTTAAAATTATAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGAGAAAAAAAATCTTATATCTGATACTTTAAAATTATAGAACA  400

seq1  CAAAATACACACAAATCAATAGTCTCCAGCTATGCATTCCGATAAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACACACAAATCAATAGTCTCCAGCTATGCATTCCGATAAAATAA  450

seq1  ATCCAGAACATTAATATTATTCATAGTGAATTAAATACAAAGTAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAACATTAATATTATTCATAGTGAATTAAATACAAAGTAAATATA  500

seq1  AAAGGATACATAAAAACTACACCCAAACATTTGCTG-ACAACTCTATAAC  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGGATACATAAAAACTACACCCAAACATTTGCTGAACAACTCTATAAC  550

seq1  -TTCAGGTGCCAAGGACTCATGTGTTGCACAGGAGTTCATGCAGGCAC-A  597
       |||| ||||||||||||||||||||||||||||||||||||| |||| |
seq2  TTTCAAGTGCCAAGGACTCATGTGTTGCACAGGAGTTCATGCA-GCACAA  599

seq1  GTGCACATGCACATAAAAATT--AAAAATAAATACGTAAC-AATGAGCTA  644
      |||||||||||||||||||||  ||||||||||||||||| |||||||||
seq2  GTGCACATGCACATAAAAATTTAAAAAATAAATACGTAACAAATGAGCTA  649

seq1  TTATAATTACCTA  657
      |||||||||||||
seq2  TTATAATTACCTA  662