BAC Information

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BAC

Clone NameB6Ng01-294N19
Chromosome14 (Build37)
Map Location 4,834,338 - 4,835,518
singlet/doubletsinglet
Overlap geneLOC100041283
Upstream geneLOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981
Downstream geneLOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294N19.bB6Ng01-294N19.g
ACCGA090881GA090882
length1,1961,074
definitionB6Ng01-294N19.b B6Ng01-294N19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccacagaactcaaatatttcatcaagttgaacacataatgcaa
gtgcattgttgcttgaagtatggtttccagtcctaagcattggcattgtc
agcagactgtaaggcaggcaattcctcaggtcctaccacatacccttatg
accagaatatagagagagtcacacacacacacacatgcatgcacacagaa
tcagggtgtgtttgcagggagaatgagaaagtacaattgaaatagaatcc
agaggaaatgcagaggacattctgtttataagacccaaaatctgagaaga
gtattaatgagcccaagaccttccatcatgtatcaggatggaccaaatgg
gaccaagctttcctggtgatatagcaagcttcagcaagcaacacctgcca
gacaattacaaagctttgcaaacaaacaaacaacgaactcaagcaagcaa
acaatcaatcaaaacctcacagcaactaatatctcactcaaacggtcaca
tgtcagtgcctctatcaatacatgctgagacatcacatcctcttcaatcc
ctcagttgtaggctttcattttcatacaaaaaaaatagaataccctatgt
ccgcagctcactcctgctctgacttcaagtatagcatgtgagaatgttta
gggagaaaaggttgggcacagtgacaccctggagttacagtctcccagta
ccataaaatttaataagaataaattgtaggccataccatagacccaagaa
attgaccatgatgtttgacagaatgaaaaatacctcttgtgcaaagcttt
ctcactgatgaagatcaggtgatcttgtagctcatttttcccactggtca
tcggctgactgattagactttccactttcctcacccatcttctgaacagg
agtgttggggatgatggtggtacaccagcagcccctatgggttagatgaa
cacaagtgaatatgcatactgtcaaggcacagagcattgacagaacactg
agtcctatacagacatcttacaaaacaggaatccatgtgacccagtcatt
tccttctttcccttccactttagcacatgcatcatgtgaccagggacagg
atccctcagcctttataatagctgcgtatgatttcattaggccagtactg
ttccataaggctggtggtataggaacacccactccgagaaaattat
gaattcctgatctttccaaaacttttatcacgaatgtgtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccccgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatcttttttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttgtacttctatcttgtgaaatagtttatgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtaccaggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcttcgtttggttaatgctttga
atagtttctttcttgtttccacttggttaatttcacccctgagtttgatt
attttcctgcggtctactcctcttgggtgattttgccttcctttttttct
agagcttttagatgtgttgtcaagcttgctagtatgtgctctctcccgtt
tcatcttggaggcactcagagctatgagttttccctcttagaattgcttt
cattgtgtccaaaggtttggttacgttggtgctttcatctcattaaactc
taaaaagtctttatattctttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4834338_4835518
seq2: B6Ng01-294N19.b_49_1244 (reverse)

seq1  ATAATTTTCT--GA-TG---GTTTCTATACCACAAG-CTTATGG-ACAGT  42
      ||||||||||  || ||   ||| ||||||||| || ||||||| |||||
seq2  ATAATTTTCTCGGAGTGGGTGTTCCTATACCACCAGCCTTATGGAACAGT  50

seq1  ACT-GCCTAATTAAATCATACGCAGCTATTAATAAGCCTGA-GGATCCTG  90
      ||| ||||||| |||||||||||||||||||  ||| |||| ||||||||
seq2  ACTGGCCTAATGAAATCATACGCAGCTATTATAAAGGCTGAGGGATCCTG  100

seq1  TCCTTGGTCACATGATGCATGTGCT-AAGT-GAAGCGAAAGA--GGAATG  136
      ||| ||||||||||||||||||||| |||| |||| ||||||  | ||||
seq2  TCCCTGGTCACATGATGCATGTGCTAAAGTGGAAGGGAAAGAAGGAAATG  150

seq1  ACTGGGTCACATGGATTCCTGTTTTGTAAGATGTCTGTATAGGACTCAGT  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTCACATGGATTCCTGTTTTGTAAGATGTCTGTATAGGACTCAGT  200

seq1  GTTCTGTCAATGCTCTGTGCCTTGACAGTATGCATATTCACTTGTGTTCA  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTCAATGCTCTGTGCCTTGACAGTATGCATATTCACTTGTGTTCA  250

seq1  TCT-ACCCATAGGGGCTGCTGGTGTACCACCATCATCCCCAACACTCCTG  285
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCCATAGGGGCTGCTGGTGTACCACCATCATCCCCAACACTCCTG  300

seq1  TTCAGAAGATGGGTGAGGAAAGTGGAAAGTCTAATCAGTCAGCCGATGAC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGATGGGTGAGGAAAGTGGAAAGTCTAATCAGTCAGCCGATGAC  350

seq1  CAGTGGGAAAAATGAGCTACAAGATCACCTGATCTTCATCAGTGAGAAAG  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGAAAAATGAGCTACAAGATCACCTGATCTTCATCAGTGAGAAAG  400

seq1  CTTTGCACAAGAGGTATTTTTCATTCTGTCAAACATCATGGTCAATTTCT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACAAGAGGTATTTTTCATTCTGTCAAACATCATGGTCAATTTCT  450

seq1  TGGGTCTATGGTATGGCCTACAATTTATTCTTATTAAATTTTATGGTACT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTATGGTATGGCCTACAATTTATTCTTATTAAATTTTATGGTACT  500

seq1  GGGAGACTGTAACTCCAGGGTGTCACTGTGCCCAACCTTTTCTCCCTAAA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTGTAACTCCAGGGTGTCACTGTGCCCAACCTTTTCTCCCTAAA  550

seq1  CATTCTCACATGCTATACTTGAAGTCAGAGCAGGAGTGAGCTGCGGACAT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCACATGCTATACTTGAAGTCAGAGCAGGAGTGAGCTGCGGACAT  600

seq1  AGGGTATTCTATTTTTTTTGTATGAAAATGAAAGCCTACAACTGAGGGAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATTCTATTTTTTTTGTATGAAAATGAAAGCCTACAACTGAGGGAT  650

seq1  TGAAGAGGATGTGATGTCTCAGCATGTATTGATAGAGGCACTGACATGTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGATGTGATGTCTCAGCATGTATTGATAGAGGCACTGACATGTG  700

seq1  ACCGTTTGAGTGAGATATTAGTTGCTGTGAGGTTTTGATTGATTGTTTGC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTTGAGTGAGATATTAGTTGCTGTGAGGTTTTGATTGATTGTTTGC  750

seq1  TTGCTTGAGTTCGTTGTTTGTTTGTTTGCAAAGCTTTGTAATTGTCTGGC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGAGTTCGTTGTTTGTTTGTTTGCAAAGCTTTGTAATTGTCTGGC  800

seq1  AGGTGTTGCTTGCTGAAGCTTGCTATATCACCAGGAAAGCTTGGTCCCAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTGCTTGCTGAAGCTTGCTATATCACCAGGAAAGCTTGGTCCCAT  850

seq1  TTGGTCCATCCTGATACATGATGGAAGGTCTTGGGCTCATTAATACTCTT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCATCCTGATACATGATGGAAGGTCTTGGGCTCATTAATACTCTT  900

seq1  CTCAGATTTTGGGTCTTATAAACAGAATGTCCTCTGCATTTCCTCTGGAT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATTTTGGGTCTTATAAACAGAATGTCCTCTGCATTTCCTCTGGAT  950

seq1  TCTATTTCAATTGTACTTTCTCATTCTCCCTGCAAACACACCCTGATTCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCAATTGTACTTTCTCATTCTCCCTGCAAACACACCCTGATTCT  1000

seq1  GTGTGCATGCATGTGTGTGTGTGTGTGACTCTCTCTATATTCTGGTCATA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGCATGTGTGTGTGTGTGTGACTCTCTCTATATTCTGGTCATA  1050

seq1  AGGGTATGTGGTAGGACCTGAGGAATTGCCTGCCTTACAGTCTGCTGACA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATGTGGTAGGACCTGAGGAATTGCCTGCCTTACAGTCTGCTGACA  1100

seq1  ATGCCAATGCTTAGGACTGGAAACCATACTTCAAGCAACAATGCACTTGC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATGCTTAGGACTGGAAACCATACTTCAAGCAACAATGCACTTGC  1150

seq1  ATTATGTGTTCAACTTGATGAAATATTTGAGTTCTGTGGTGAATTC  1181
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGTTCAACTTGATGAAATATTTGAGTTCTGTGGTGAATTC  1196