BAC Information

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BAC

Clone NameB6Ng01-295C17
Chromosome14 (Build37)
Map Location 57,816,002 - 57,816,679
singlet/doubletsinglet
Overlap genenone
Upstream geneGzmf, Gzmc, LOC219102, Gzmb, LOC668082, Atp12a, Rnf17, Cenpj, Parp4, LOC100042788, 4930548G07Rik, Pspc1, LOC100043499, 9830124H08Rik, LOC100042797, LOC219106, LOC668118, Zmym2, LOC100042817, B020004C17Rik, Gja3, Gjb2, LOC100043515, Gjb6
Downstream geneLOC668140, Cryl1, LOC668090, AU040096, Ift88, Il17d, N6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295C17.bB6Ng01-295C17.g
ACCGA091107GA091108
length262678
definitionB6Ng01-295C17.b B6Ng01-295C17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agttcctcaccatgtcgttcctccacagcaagaacaactgttctctgttg
acacaaattctctgatgatcacccaatgctttggatcttgacctagaaga
gcttgcccttattttattgggtttatttctagatgcttaagaactgttca
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgactgtgttccactcacgtgataatttcctgcctggtgagatgcgtatt
ttagtttgttca
gaattccttgatctctattacaaccacttcatttctgccactcaaatgga
aagtggacttaggcagatataatccctttaagatgatatttgtagagaag
aatttctgcttccaatacagaacattgacatatgtgtaaaatattgacaa
aagcagtagtgttttaaagaaattacacttctgaattgatttttatattc
tattgtgagtatagttgacatgaatttctggagtgggtagtgagtgtatt
tattttaaatgccttgattctgatacattctcattaggtttttaaaaaat
taaattagatactaaactgtatgaacatcactttttaactttacattaaa
ctctcattcttgaattcggatggtaactcccaatgaaaagcatggttaca
tgattcttaatagaagaatcttattgcggagagttagctaaatttctagc
gttcctcatcaaaatagagtggcttgctgctagattctgagtcagccact
gcatctgactagacaccggtttcttcaaggtgactaataacaactgctta
gttctgaggcaagtaactgcccttcaggcgaactttggtaggctgcacct
tgaattttattatttataaaaattttattttatttcagttgtgcatgtgg
gtatgtatgtatgtatatgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_57816002_57816679
seq2: B6Ng01-295C17.g_68_745 (reverse)

seq1  ACACACACACATATACATACATACATACCCACATGCACAACTGAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATATACATACATACATACCCACATGCACAACTGAAATAAA  50

seq1  ATAAAATTTTTATAAATAATAAAATTCAAGGTGCAGCCTACCAAAGTTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTTTATAAATAATAAAATTCAAGGTGCAGCCTACCAAAGTTCG  100

seq1  CCTGAAGGGCAGTTACTTGCCTCAGAACTAAGCAGTTGTTATTAGTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGGCAGTTACTTGCCTCAGAACTAAGCAGTTGTTATTAGTCACC  150

seq1  TTGAAGAAACCGGTGTCTAGTCAGATGCAGTGGCTGACTCAGAATCTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAAACCGGTGTCTAGTCAGATGCAGTGGCTGACTCAGAATCTAGC  200

seq1  AGCAAGCCACTCTATTTTGATGAGGAACGCTAGAAATTTAGCTAACTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCACTCTATTTTGATGAGGAACGCTAGAAATTTAGCTAACTCTC  250

seq1  CGCAATAAGATTCTTCTATTAAGAATCATGTAACCATGCTTTTCATTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATAAGATTCTTCTATTAAGAATCATGTAACCATGCTTTTCATTGGG  300

seq1  AGTTACCATCCGAATTCAAGAATGAGAGTTTAATGTAAAGTTAAAAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCATCCGAATTCAAGAATGAGAGTTTAATGTAAAGTTAAAAAGTG  350

seq1  ATGTTCATACAGTTTAGTATCTAATTTAATTTTTTAAAAACCTAATGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATACAGTTTAGTATCTAATTTAATTTTTTAAAAACCTAATGAGA  400

seq1  ATGTATCAGAATCAAGGCATTTAAAATAAATACACTCACTACCCACTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAGAATCAAGGCATTTAAAATAAATACACTCACTACCCACTCCA  450

seq1  GAAATTCATGTCAACTATACTCACAATAGAATATAAAAATCAATTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATGTCAACTATACTCACAATAGAATATAAAAATCAATTCAGAA  500

seq1  GTGTAATTTCTTTAAAACACTACTGCTTTTGTCAATATTTTACACATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTTCTTTAAAACACTACTGCTTTTGTCAATATTTTACACATATG  550

seq1  TCAATGTTCTGTATTGGAAGCAGAAATTCTTCTCTACAAATATCATCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTCTGTATTGGAAGCAGAAATTCTTCTCTACAAATATCATCTTA  600

seq1  AAGGGATTATATCTGCCTAAGTCCACTTTCCATTTGAGTGGCAGAAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATTATATCTGCCTAAGTCCACTTTCCATTTGAGTGGCAGAAATGA  650

seq1  AGTGGTTGTAATAGAGATCAAGGAATTC  678
      ||||||||||||||||||||||||||||
seq2  AGTGGTTGTAATAGAGATCAAGGAATTC  678