BAC Information

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BAC

Clone NameB6Ng01-298B09
Chromosome14 (Build37)
Map Location 14,566,404 - 14,697,066
singlet/doubletdoublet
Overlap geneEG382844, LOC100042045, Gm281
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik
Downstream geneThoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298B09.bB6Ng01-298B09.g
ACCGA093287GA093288
length9631,152
definitionB6Ng01-298B09.b B6Ng01-298B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,566,404 - 14,567,111)(14,695,917 - 14,697,066)
sequence
gaattctagattcatctaagcaatctgaacaaatatttttttatctcaga
ctctttcacaaccttgagattatgtttccatctgggaaacatagtagggt
gtaagtataaacatgatgtcatgttgatgactatacattttatcctgaac
ttagttacggtatattctttgtttcctactttaaaatttttacacatgct
tattactgtttctaaattatcttaatatctggacactttgctgaagttgt
ttatcagctggagaagttctctggtagaatttttgaggttgcttatgtat
actatcatatcatttgcaaaaaataatacatttatttcttctttaccaat
ttgtatccccttgatctctttttattgtcttatttttctagctaacactt
cgagtacaatattgaatagatatggggagagcgggcgtccttgttttgtc
cccaatttcaataggattgcttcaagtatttctccatttaatttgatatt
ggctgttggtttgcagtaagttacttttattatgtttaggtgtgggcctt
ggattcctgatctctctaatacttttaacatgaagggagtgttctatttt
gtcaaatgctttttctgcatctaaggagatgatcatgtgatttttttctt
tgactttgtttatatagtggattacattaatggattttcatgcactaaac
caactttgcatccctaggatgaagcctacttgatcgtggtgaatgatgac
tttgatgtgttcttgggattcagtttgtaaaattttattgagtatttttg
cattgatattcataagcgagattggtctgaattgcttttttggttgggtc
cttgtgtgatttatgtatcacagtaattgtggcttcatagaatgagttag
gtagtgttccttctgtttctctttatggaatagtttggaggaaaattggt
atcatgtcttctt
gaattctccccgtaagtctagagaatagggcatactttttactttttttt
ctgtagtattacatgtaacaaagtcatttttaaaatgagagtctggactt
actgagcaggatgtgctgtttcgttacagagaaggggaccgtggttacga
ctaaccatctagatgtggagaaaactggctttgcaagtgctctgtccttc
tctattaaggcatgtgatggtgatcagaggtgtacagtgattccagtggc
tacctacattcgtggcattaatgacaactctcctttctgtgatcagtatc
tcattcggtgagcggacaatagacagaagcaagaactcagattgggcaga
gagaaggaaggactgttgtatctatcagctcactatgacatgtggctgat
caagtttaatcttggttactcagaaatgttcctcacaaatagcctggtgg
tccttctgtgattgaaagttgagtttccaagatctgaaagtgagatctgg
ggttttaatggttctacttctgtcattaacagaagccctactgttttgct
ttgtaaaatggcatgtcagtagatctttttgaaaattggttgtgaagaat
taatggactaattttggggactgtttcagcatagtgctgagcagctgcta
tgacataatttcccttattatgaatctgcaattatcaccagaaatcctta
ccactgaatagatttctggttaaagattttgttcctgtctcagtaaaata
tttgccttataagaacaaggatctgacttcagtacccatgacacagatta
aaaaaaacaaaacaaaaacaaaaaaacaaaaaaaaaacccggtgtggtag
caagcttttgggatacttagcccttgaggatggagtggaggagacaggca
ggtcactgggacccacctgggccaggcagacaagcttacttagaaaccag
gtgcagaaaggtctgtccaaacaaatcaaaccaaaccaaaccaatcaacc
aacaaaccaacaaccccacacaaacaaatagtggacagtgttcttctagc
tttaactaacatgtgtacatggtgtacatgtgtcacacctcatgtacatg
tacacccaatggtgacacttgcacacacaggtccaaaccatatagaactt
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14566404_14567111
seq2: B6Ng01-298B09.b_47_754

seq1  GAATTCTAGATTCATCTAAGCAATCTGAACAAATATTTTTTTATCTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATTCATCTAAGCAATCTGAACAAATATTTTTTTATCTCAGA  50

seq1  CTCTTTCACAACCTTGAGATTATGTTTCCATCTGGGAAACATAGTAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCACAACCTTGAGATTATGTTTCCATCTGGGAAACATAGTAGGGT  100

seq1  GTAAGTATAAACATGATGTCATGTTGATGACTATACATTTTATCCTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATAAACATGATGTCATGTTGATGACTATACATTTTATCCTGAAC  150

seq1  TTAGTTACGGTATATTCTTTGTTTCCTACTTTAAAATTTTTACACATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTACGGTATATTCTTTGTTTCCTACTTTAAAATTTTTACACATGCT  200

seq1  TATTACTGTTTCTAAATTATCTTAATATCTGGACACTTTGCTGAAGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGTTTCTAAATTATCTTAATATCTGGACACTTTGCTGAAGTTGT  250

seq1  TTATCAGCTGGAGAAGTTCTCTGGTAGAATTTTTGAGGTTGCTTATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGCTGGAGAAGTTCTCTGGTAGAATTTTTGAGGTTGCTTATGTAT  300

seq1  ACTATCATATCATTTGCAAAAAATAATACATTTATTTCTTCTTTACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATATCATTTGCAAAAAATAATACATTTATTTCTTCTTTACCAAT  350

seq1  TTGTATCCCCTTGATCTCTTTTTATTGTCTTATTTTTCTAGCTAACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCCCTTGATCTCTTTTTATTGTCTTATTTTTCTAGCTAACACTT  400

seq1  CGAGTACAATATTGAATAGATATGGGGAGAGCGGGCGTCCTTGTTTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTACAATATTGAATAGATATGGGGAGAGCGGGCGTCCTTGTTTTGTC  450

seq1  CCCAATTTCAATAGGATTGCTTCAAGTATTTCTCCATTTAATTTGATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTTCAATAGGATTGCTTCAAGTATTTCTCCATTTAATTTGATATT  500

seq1  GGCTGTTGGTTTGCAGTAAGTTACTTTTATTATGTTTAGGTGTGGGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTGGTTTGCAGTAAGTTACTTTTATTATGTTTAGGTGTGGGCCTT  550

seq1  GGATTCCTGATCTCTCTAATACTTTTAACATGAAGGGAGTGTTCTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCTGATCTCTCTAATACTTTTAACATGAAGGGAGTGTTCTATTTT  600

seq1  GTCAAATGCTTTTTCTGCATCTAAGGAGATGATCATGTGATTTTTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATGCTTTTTCTGCATCTAAGGAGATGATCATGTGATTTTTTTCTT  650

seq1  TGACTTTGTTTATATAGTGGATTACATTAATGGATTTTCATGCACTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGTTTATATAGTGGATTACATTAATGGATTTTCATGCACTAAAC  700

seq1  CAACTTTG  708
      ||||||||
seq2  CAACTTTG  708

seq1: chr14_14695917_14697066
seq2: B6Ng01-298B09.g_68_1219 (reverse)

seq1  CAAAG-TCTATATG--TTTGTGCTGTGTGTGCAGGTG-CAC--ATGGGTG  44
      ||||| ||||||||  || |  ||||||||||| ||| |||   ||||||
seq2  CAAAGTTCTATATGGTTTGGACCTGTGTGTGCAAGTGTCACCATTGGGTG  50

seq1  TACAGGTACATGA-GTGTG-CACATGTACA-CATGTACACATGTAGGTAA  91
      |||| |||||||| ||||| |||||||||| |||||||||||||  || |
seq2  TACATGTACATGAGGTGTGACACATGTACACCATGTACACATGTTAGTTA  100

seq1  AAGCTAGAAG-ACACTGTCCACTATTTTGTTTGGTGGTGGGGGTTTGGTT  140
      |||||||||| ||||||||||||| |||||||    ||| ||| |||  |
seq2  AAGCTAGAAGAACACTGTCCACTA-TTTGTTT----GTGTGGGGTTG--T  143

seq1  TGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGGA  190
      |||||||  ||||||  | |||||||||||||||||| ||||  || |||
seq2  TGGTTTG--TTGGTT--GATTGGTTTGGTTTGGTTTGATTTG--TTTGGA  187

seq1  CAGA-CTTTCTGCA-CTGGTTTCTAAGTAAGCTTGTCTGCCTGGCC--AG  236
      |||| ||||||||| |||||||||||||||||||||||||||||||   |
seq2  CAGACCTTTCTGCACCTGGTTTCTAAGTAAGCTTGTCTGCCTGGCCCAGG  237

seq1  TGGGTCCCAGTGACCTGCCTGTCTCCTCCACTCCATCCTCAAGGGCTAAG  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCCAGTGACCTGCCTGTCTCCTCCACTCCATCCTCAAGGGCTAAG  287

seq1  TAT-CCAAAAGCTTGCTACCACACCGGGTTTTTTTTTTG-TTTTTTGTTT  334
      ||| ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATCCCAAAAGCTTGCTACCACACCGGGTTTTTTTTTTGTTTTTTTGTTT  337

seq1  TTGTTTTTGTTTTTTTTAATCTGTGTCATGGGTACTGAAGTCAGATCCTT  384
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTG-TTTTGTTTTTTTTAATCTGTGTCATGGGTACTGAAGTCAGATCCTT  386

seq1  GTTCTTATAAGGCAAATATTTTACTGAGACAGGAACAAAATCTTTAACCA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTATAAGGCAAATATTTTACTGAGACAGGAACAAAATCTTTAACCA  436

seq1  GAAATCTATTCAGTGGTAAGGATTTCTGGTGATAATTGCAGATTCATAAT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTATTCAGTGGTAAGGATTTCTGGTGATAATTGCAGATTCATAAT  486

seq1  AAGGGAAATTATGTCATAGCAGCTGCTCAGCACTATGCTGAAACAGTCCC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAATTATGTCATAGCAGCTGCTCAGCACTATGCTGAAACAGTCCC  536

seq1  CAAAATTAGTCCATTAATTCTTCACAACCAATTTTCAAAAAGATCTACTG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAGTCCATTAATTCTTCACAACCAATTTTCAAAAAGATCTACTG  586

seq1  ACATGCCATTTTACAAAGCAAAACAGTAGGGCTTCTGTTAATGACAGAAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATTTTACAAAGCAAAACAGTAGGGCTTCTGTTAATGACAGAAG  636

seq1  TAGAACCATTAAAACCCCAGATCTCACTTTCAGATCTTGGAAACTCAACT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCATTAAAACCCCAGATCTCACTTTCAGATCTTGGAAACTCAACT  686

seq1  TTCAATCACAGAAGGACCACCAGGCTATTTGTGAGGAACATTTCTGAGTA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCACAGAAGGACCACCAGGCTATTTGTGAGGAACATTTCTGAGTA  736

seq1  ACCAAGATTAAACTTGATCAGCCACATGTCATAGTGAGCTGATAGATACA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGATTAAACTTGATCAGCCACATGTCATAGTGAGCTGATAGATACA  786

seq1  ACAGTCCTTCCTTCTCTCTGCCCAATCTGAGTTCTTGCTTCTGTCTATTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTTCCTTCTCTCTGCCCAATCTGAGTTCTTGCTTCTGTCTATTG  836

seq1  TCCGCTCACCGAATGAGATACTGATCACAGAAAGGAGAGTTGTCATTAAT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTCACCGAATGAGATACTGATCACAGAAAGGAGAGTTGTCATTAAT  886

seq1  GCCACGAATGTAGGTAGCCACTGGAATCACTGTACACCTCTGATCACCAT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGAATGTAGGTAGCCACTGGAATCACTGTACACCTCTGATCACCAT  936

seq1  CACATGCCTTAATAGAGAAGGACAGAGCACTTGCAAAGCCAGTTTTCTCC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCCTTAATAGAGAAGGACAGAGCACTTGCAAAGCCAGTTTTCTCC  986

seq1  ACATCTAGATGGTTAGTCGTAACCACGGTCCCCTTCTCTGTAACGAAACA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGATGGTTAGTCGTAACCACGGTCCCCTTCTCTGTAACGAAACA  1036

seq1  GCACATCCTGCTCAGTAAGTCCAGACTCTCATTTTAAAAATGACTTTGTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCCTGCTCAGTAAGTCCAGACTCTCATTTTAAAAATGACTTTGTT  1086

seq1  ACATGTAATACTACAGAAAAAAAAGTAAAAAGTATGCCCTATTCTCTAGA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATACTACAGAAAAAAAAGTAAAAAGTATGCCCTATTCTCTAGA  1136

seq1  CTTACGGGGAGAATTC  1150
      ||||||||||||||||
seq2  CTTACGGGGAGAATTC  1152