BAC Information

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BAC

Clone NameB6Ng01-298F06
Chromosome14 (Build37)
Map Location 11,262,972 - 11,264,114
singlet/doubletsinglet
Overlap geneFhit
Upstream geneLOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298F06.bB6Ng01-298F06.g
ACCGA093464GA093465
length1,1731,146
definitionB6Ng01-298F06.b B6Ng01-298F06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatctctgtaccccatttttaatggggttatttgagtt
tctggaattcagcttcttgagctctttgtatatattggatattagtcccc
tatcagatttaggattggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtctcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcaatacttgatcttacagcataagccattgctgttc
tgtttaggaatttgtcccctgtgcccatatctttgaggctttcccccacc
ttctcctctattagtttcagtatctctcattttatgtggaggtctttgat
ccacttagatttgagctctgtacagggcaataagaatggatcaatttgca
ttcttctacatgataactgccagttgggccagcaccatttgataaaaatg
ctgtcttttttccactggatgattttagcctcctggtcaaagaacaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattgat
ctacctgtctgtcactgtaccagtaccatgcaggtttttttttttttcca
caattattctgtagtacagcttaatgtcaggaatggtgattccaccagag
gttcttttattgttgagaatagtttttgctatcctaggtttttttattat
tccagatgaatttgcaaattgccctttctatctcagtgaagaattgagtt
ggaattttgatgggattgcattgaacctgtagattgctttcggcaggata
gccattttaactatattaatcctcccaatccatgagcataagggatcttc
tcatcttctgaaatcttcaatttctttctttagagacttgaagttattat
catacagattctttttagttccttagttagagtcacaccaaagtattttt
attattatttgtgactattgtgaagggtgttgtttcccttaatttctttc
ctcatcctgttatctttgtgttagagaaatgcatgattgtttgaagtagt
tcatatcagctactacactgaagctgtttatcagtttccgaagtctctgt
tgaattcgggtcactatataccatcgtacatcgcatgggaatcgacttcg
tagttgcatgtggatacccttga

gaattcagaaaatcaaggacttagttatgggactcactcaaagggtcatg
ctcctgaattatatttattaatagatgtcagtcagtaaagaacttggtgt
tccctcctgttataaagaaaagaggaagtaggtatgataaccaaaaccac
gctcttatatatgtaagctttctttcttcttcttgatattctgtggcagt
aactgcttttgcttttaaccaaaactgtaaggttctggaatttcctacat
ctcccaaatttccattcatgaaaagtatcatctctctacctccctcctat
gacctacatgtgtcctctgtccatctgctaacaccctagctcctcgtcac
tcttggaagctaggaagaggacatgagtttaagaacttcctcttcaaagt
taaccaaatagaaaggaactagcacagagatttctgtgccttatatgaat
aagtctgtgactcagcacagctgcttggttttgttgctgataggaatagt
tgagctatagggttcatagaataaggttcaatggccagatcgaacagtga
cagatcattccatggtcggccaggtttatccctggtttgcttttaaatgt
tatgctaatgtctcactaaactgccaaatgcttcaaatcttgttccaaga
aagaatagctaactctagaatttctgggtggaaaggggcttgtgagatca
cttagatccagcagtcgcactttagagacactgagcatgtccagaatgca
agtggcctactcaaatgagcactgaacttcagtggtctcatggatcttta
taaagtgtaagatttaaggattctataaacttgagaccctaatttaagaa
gttaaattatagataactcactttgggggcatcccttagtattgaaggca
tgagcaatactcatcctaagaaattcacagaggattcagaattatagcct
atgttctattaattccacattgcctcttcaagcacagactacttatgaaa
ctgacttttagtttttaatttagattcctccaaaatccatgacccatact
ttggacctcaggacttcagtaccacacggatccgaccataaagatggaaa
ttcttatatcacttgacctaccaagagcgcttgggttcccacttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11262972_11264114
seq2: B6Ng01-298F06.g_69_1214

seq1  GAATTCAGAAAATCAAGGACTTAGTTATGGGACTCACTCAAAGGGTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAATCAAGGACTTAGTTATGGGACTCACTCAAAGGGTCATG  50

seq1  CTCCTGAATTATATTTATTAATAGATGTCAGTCAGTAAAGAACTTGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAATTATATTTATTAATAGATGTCAGTCAGTAAAGAACTTGGTGT  100

seq1  TCCCTCCTGTTATAAAGAAAAGAGGAAGTAGGTATGATAACCAAAACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTGTTATAAAGAAAAGAGGAAGTAGGTATGATAACCAAAACCAC  150

seq1  GCTCTTATATATGTAAGCTTTCTTTCTTCTTCTTGATATTCTGTGGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATATATGTAAGCTTTCTTTCTTCTTCTTGATATTCTGTGGCAGT  200

seq1  AACTGCTTTTGCTTTTAACCAAAACTGTAAGGTTCTGGAATTTCCTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTTTGCTTTTAACCAAAACTGTAAGGTTCTGGAATTTCCTACAT  250

seq1  CTCCCAAATTTCCATTCATGAAAAGTATCATCTCTCTACCTCCCTCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAATTTCCATTCATGAAAAGTATCATCTCTCTACCTCCCTCCTAT  300

seq1  GACCTACATGTGTCCTCTGTCCATCTGCTAACACCCTAGCTCCTCGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACATGTGTCCTCTGTCCATCTGCTAACACCCTAGCTCCTCGTCAC  350

seq1  TCTTGGAAGCTAGGAAGAGGACATGAGTTTAAGAACTTCCTCTTCAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAAGCTAGGAAGAGGACATGAGTTTAAGAACTTCCTCTTCAAAGT  400

seq1  TAACCAAATAGAAAGGAACTAGCACAGAGATTTCTGTGCCTTATATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAATAGAAAGGAACTAGCACAGAGATTTCTGTGCCTTATATGAAT  450

seq1  AAGTCTGTGACTCAGCACAGCTGCTTGGTTTTGTTGCTGATAGGAATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGTGACTCAGCACAGCTGCTTGGTTTTGTTGCTGATAGGAATAGT  500

seq1  TGAGCTATAGGGTTCATAGAATAAGGTTCAATGGCCAGATCGAACAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATAGGGTTCATAGAATAAGGTTCAATGGCCAGATCGAACAGTGA  550

seq1  CAGATCATTCCATGGTCGGCCAGGTTTATCCCTGGTTTGCTTTTAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATTCCATGGTCGGCCAGGTTTATCCCTGGTTTGCTTTTAAATGT  600

seq1  TATGCTAATGTCTCACTAAACTGCCAAATGCTTCAAATCTTGTTCCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAATGTCTCACTAAACTGCCAAATGCTTCAAATCTTGTTCCAAGA  650

seq1  AAGAATAGCTAACTCTAGAATTTCTGGGTGGAAAGGGGCTTGTGAGATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGCTAACTCTAGAATTTCTGGGTGGAAAGGGGCTTGTGAGATCA  700

seq1  CTTAGATCCAGCAGTCGCACTTTAGAGACACTGAGCATGTCCAGAATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATCCAGCAGTCGCACTTTAGAGACACTGAGCATGTCCAGAATGCA  750

seq1  AGTGGCCTACTCAAATGAGCACTGAACTTCAGTGGTCTCATGGATCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTACTCAAATGAGCACTGAACTTCAGTGGTCTCATGGATCTTTA  800

seq1  TAAAGTGTAAGATTTAAGGATTCTATAAACTTGAGACCCTAATTTAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTAAGATTTAAGGATTCTATAAACTTGAGACCCTAATTTAAGAA  850

seq1  GTTAAATTATAGATAACTCACTTTGGGGGCATCCCTTAGTATTGAAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTATAGATAACTCACTTTGGGGGCATCCCTTAGTATTGAAGGCA  900

seq1  TGAGCAATACTCATCCTAAGAAATTCAACAGAGGATTCAGAATATAAGCC  950
      |||||||||||||||||||||||||| ||||||||||||||||   ||||
seq2  TGAGCAATACTCATCCTAAGAAATTC-ACAGAGGATTCAGAATTATAGCC  949

seq1  TATG-TCTATTAATTCCACATTGCCTCTTCAAGCACAGACTAC-TATG-A  997
      |||| |||||||||||||||||||||||||||||||||||||| |||| |
seq2  TATGTTCTATTAATTCCACATTGCCTCTTCAAGCACAGACTACTTATGAA  999

seq1  ACTGACTTTTTAATTTTTATTTAGA-TCCTCCAAAATCCATGACCCATAC  1046
      ||||||||||   |||| ||||||| ||||||||||||||||||||||||
seq2  ACTGACTTTTAGTTTTTAATTTAGATTCCTCCAAAATCCATGACCCATAC  1049

seq1  TTGGAACCTCAGGACTTCCAGTAACCACAC-GACCAAACCCATAAAGATG  1095
      || | |||||||||||| |||| ||||||| || |  | |||||||||||
seq2  TTTGGACCTCAGGACTT-CAGT-ACCACACGGATCCGA-CCATAAAGATG  1096

seq1  AGAAATTC-TATACCAC-TGA-CTACCAAGAAGCCGCT--GGGTCCCACT  1140
       ||||||| |||| ||| ||| |||||||||   ||||  || |||||||
seq2  -GAAATTCTTATATCACTTGACCTACCAAGA--GCGCTTGGGTTCCCACT  1143

seq1  TCA  1143
      |||
seq2  TCA  1146


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