BAC Information

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BAC

Clone NameB6Ng01-299E11
Chromosome14 (Build37)
Map Location 93,454,925 - 93,455,384
singlet/doubletsinglet
Overlap genePcdh9
Upstream geneEG665377, LOC638252
Downstream geneLOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299E11.bB6Ng01-299E11.g
ACCGA094163GA094164
length1,161454
definitionB6Ng01-299E11.b B6Ng01-299E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactacagtaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaacctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgcatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgctcctccttagaagtgggaa
caaaacacccttgaaaggaggtacagagacaaagtttggagctgagatca
aaagatggaccatttagagactgccatatccggggattcatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctattgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcagctattggaagacacatggaccccaat
gaagagctagagaaagtacccaagagctaaagggatctgcaccctatagt
gacacattatgactacagtaccaagagcctctttactctagctgcaatgt
atcagagaatgcctagcgcatcacttgaaagaaagcatgacacgctaacc
tttatatgccagtacacggtatcagtctatcagcatgttgttaggctcgt
gctttcatcat

ctagtctggtttaggagtgccatcttttattcatcttagagatttcaact
gatcagagtgggctcatatgtactataggagcaatctcttttacttataa
atactggatttgaatgtcaatcataagtaatgaatgccttcaaagtagca
ttagcttgtgatcaaatgcctgcttactacagaaaagccaagttagcaca
cacaattttccatcacaaagtggattgcacttttcttgcaaactgcactt
aaagtaccccctagcaaagaacacatctcgacttgatggttagattagtc
cagaaaacatccctcgcagtctcctggtggtggtgtaccttattggagaa
cttcctaagattgagtttaactctcactgatgcagagaaaaattaaagct
tttaaatttaatgaaaaggagagtgtgagaaggagatgaggaggggaggg
ggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93454925_93455384
seq2: B6Ng01-299E11.g_69_528 (reverse)

seq1  TTCCCCCTCCCCTCCTCATCTCCTTCTCACACTCTCCTTTTCATTAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCCCCTCCTCATCTCCTTCTCACACTCTCCTTTTCATTAAATT  50

seq1  TAAAAGCTTTAATTTTTCTCTGCATCAGTGAGAGTTAAACTCAATCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTTTAATTTTTCTCTGCATCAGTGAGAGTTAAACTCAATCTTAG  100

seq1  GAAGTTCTCCAATAAGGTACACCACCACCAGGAGACTGCGAGGGATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTCCAATAAGGTACACCACCACCAGGAGACTGCGAGGGATGTTT  150

seq1  TCTGGACTAATCTAACCATCAAGTCGAGATGTGTTCTTTGCTAGGGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACTAATCTAACCATCAAGTCGAGATGTGTTCTTTGCTAGGGGGTA  200

seq1  CTTTAAGTGCAGTTTGCAAGAAAAGTGCAATCCACTTTGTGATGGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGTGCAGTTTGCAAGAAAAGTGCAATCCACTTTGTGATGGAAAAT  250

seq1  TGTGTGTGCTAACTTGGCTTTTCTGTAGTAAGCAGGCATTTGATCACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCTAACTTGGCTTTTCTGTAGTAAGCAGGCATTTGATCACAAG  300

seq1  CTAATGCTACTTTGAAGGCATTCATTACTTATGATTGACATTCAAATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTACTTTGAAGGCATTCATTACTTATGATTGACATTCAAATCCA  350

seq1  GTATTTATAAGTAAAAGAGATTGCTCCTATAGTACATATGAGCCCACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATAAGTAAAAGAGATTGCTCCTATAGTACATATGAGCCCACTCT  400

seq1  GATCAGTTGAAATCTCTAAGATGAATAAAAGATGGCACTCCTAAACCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTTGAAATCTCTAAGATGAATAAAAGATGGCACTCCTAAACCAGA  450

seq1  CTAGGAATTC  460
      ||||||||||
seq2  CTAGGAATTC  460


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