BAC Information

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BAC

Clone NameB6Ng01-299F11
Chromosome14 (Build37)
Map Location 110,517,351 - 110,641,293
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299F11.bB6Ng01-299F11.g
ACCGA094207GA094208
length5891,068
definitionB6Ng01-299F11.b B6Ng01-299F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,640,699 - 110,641,293)(110,517,351 - 110,518,395)
sequence
ttaaggcatttcattagcatttcattgttttttgcaaactaaccttcttt
ttttgagaaacagctgtgtaactgaattataatgaaatgtcgtgttggcc
tttctgtgtattcattacagagagtgagccccaatggaaatcaacaagtt
tatccagttttcctaagacagtctcataaaatctatttttgctctgtctg
aattctctaatttactttttatcttattttgaatgtctagtggtttttgt
aatccatgtccctttccacgtaggtactttctgtttctagagctaaattt
acttcctatattcattattacagcatatgatagctttctatttttaaatg
tatgtgtttttattgcagggttgctggcattaaaaaacatatgtattaaa
tatggcaagacataactatatccaagttttcctaataaatcaatgaaaga
ttcttctttcctttttgaattcacacaattccatgcaattaattgttcat
ggaggttgatggtaagaactgaaaagtcttttatttgttttaacttagaa
cttgttcatgtaaactaagtaagtgtgtgtgtgtgtgtt

gaattcaacatatagcgatattttatttttacatggacttagttatattt
tgataaagaaaagagttttctttgaagaatggctatctgccctatagttt
ccaatgttaaagttgtaattcattatttcctatttttccacctttccaac
ttcacgttgtgcattcatgagctacagactgtagtgacattcatatgtcc
atcatattagtgatgagttgaataagtgcaagcaagtatatttggtatag
gatatggaaagtgtagataaatagaaacatcactcaaaaaaatctaattg
gtcataatgatatgataaagattccagatttctaaaactaaaactggaaa
agatgtatttaaaagcgagtaactagttggtaggttcttccctggggaaa
atgatttctcttacgcttagaaatcttttgttgtctataggtctttgtgc
cagtttaaggccaccttgaaatcaacccagctcccaaattccatgcccat
tattcttgcgtacatacatatacaaacatatttgaaacaatacttaatga
gaaaagagaccctgcccttcactggctgctgcactagggggagtgggccc
tgcttctcctctgggcagcacagttcagttgtccctagaagaagaggcac
atatcatcaggcctaagtgccaggtggactcacaattcctctgctgtgtg
gtggcatgggttcaggggtgatgtttgttgtgaccccagtggtggtactg
gccaggtatagcaggctggtccttccagccctcatgcctttcaggttttc
tagttccatccctctttcataatgtgcaagctgtttccatttcttccttt
ctctccccatctgaaaaatccgcctactcacacatttgtgggagttgtga
gcagcttttgagcctgggcccttgcagctgggcggccctgagtgacatca
ttcgctgattttgctccaaaggaacaccaccaccaaaaaaggtatctgtc
tgaccatttgccaggttgggggggaaaggaactcctccttaacttttatc
attaaatgattacgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110640699_110641293
seq2: B6Ng01-299F11.b_43_637 (reverse)

seq1  AACACACACACACACACTTACTTAGTTTACATGAACAAGTTCTAAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACACACACTTACTTAGTTTACATGAACAAGTTCTAAGTTAA  50

seq1  AACAAATAAAAGACTTTTCAGTTCTTACCATCAACCTCCATGAACAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAAAGACTTTTCAGTTCTTACCATCAACCTCCATGAACAATTA  100

seq1  ATTGCATGGAATTGTGTGAATTCAAAAAGGAAAGAAGAATCTTTCATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGGAATTGTGTGAATTCAAAAAGGAAAGAAGAATCTTTCATTGA  150

seq1  TTTATTAGGAAAACTTGGATATAGTTATGTCTTGCCATATTTAATACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGAAAACTTGGATATAGTTATGTCTTGCCATATTTAATACATA  200

seq1  TGTTTTTTAATGCCAGCAACCCTGCAATAAAAACACATACATTTAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTAATGCCAGCAACCCTGCAATAAAAACACATACATTTAAAAAT  250

seq1  AGAAAGCTATCATATGCTGTAATAATGAATATAGGAAGTAAATTTAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTATCATATGCTGTAATAATGAATATAGGAAGTAAATTTAGCTC  300

seq1  TAGAAACAGAAAGTACCTACGTGGAAAGGGACATGGATTACAAAAACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGAAAGTACCTACGTGGAAAGGGACATGGATTACAAAAACCAC  350

seq1  TAGACATTCAAAATAAGATAAAAAGTAAATTAGAGAATTCAGACAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATTCAAAATAAGATAAAAAGTAAATTAGAGAATTCAGACAGAGCA  400

seq1  AAAATAGATTTTATGAGACTGTCTTAGGAAAACTGGATAAACTTGTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGATTTTATGAGACTGTCTTAGGAAAACTGGATAAACTTGTTGAT  450

seq1  TTCCATTGGGGCTCACTCTCTGTAATGAATACACAGAAAGGCCAACACGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGGGGCTCACTCTCTGTAATGAATACACAGAAAGGCCAACACGA  500

seq1  CATTTCATTATAATTCAGTTACACAGCTGTTTCTCAAAAAAAGAAGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATTATAATTCAGTTACACAGCTGTTTCTCAAAAAAAGAAGGTTA  550

seq1  GTTTGCAAAAAACAATGAAATGCTAATGAAATGCCTTAAGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAAAAAACAATGAAATGCTAATGAAATGCCTTAAGAATTC  595


seq1: chr14_110517351_110518395
seq2: B6Ng01-299F11.g_69_1136

seq1  GAATTCAACATATAGCGATATTTTATTTTTACATGGACTTAGTTATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATATAGCGATATTTTATTTTTACATGGACTTAGTTATATTT  50

seq1  TGATAAAGAAAAGAGTTTTCTTTGAAGAATGGCTATCTGCCCTATAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGAAAAGAGTTTTCTTTGAAGAATGGCTATCTGCCCTATAGTTT  100

seq1  CCAATGTTAAAGTTGTAATTCATTATTTCCTATTTTTCCACCTTTCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTAAAGTTGTAATTCATTATTTCCTATTTTTCCACCTTTCCAAC  150

seq1  TTCACGTTGTGCATTCATGAGCTACAGACTGTAGTGACATTCATATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGTTGTGCATTCATGAGCTACAGACTGTAGTGACATTCATATGTCC  200

seq1  ATCATATTAGTGATGAGTTGAATAAGTGCAAGCAAGTATATTTGGTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTAGTGATGAGTTGAATAAGTGCAAGCAAGTATATTTGGTATAG  250

seq1  GATATGGAAAGTGTAGATAAATAGAAACATCACTCAAAAAAATCTAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGAAAGTGTAGATAAATAGAAACATCACTCAAAAAAATCTAATTG  300

seq1  GTCATAATGATATGATAAAGATTCCAGATTTCTAAAACTAAAACTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAATGATATGATAAAGATTCCAGATTTCTAAAACTAAAACTGGAAA  350

seq1  AGATGTATTTAAAAGCGAGTAACTAGTTGGTAGGTTCTTCCCTGGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATTTAAAAGCGAGTAACTAGTTGGTAGGTTCTTCCCTGGGGAAA  400

seq1  ATGATTTCTCTTACGCTTAGAAATCTTTTGTTGTCTATAGGTCTTTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTCTTACGCTTAGAAATCTTTTGTTGTCTATAGGTCTTTGTGC  450

seq1  CAGTTTAAGGCCACCTTGAAATCAACCCAGCTCCCAAATTCCATGCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAAGGCCACCTTGAAATCAACCCAGCTCCCAAATTCCATGCCCAT  500

seq1  TATTCTTGCGTACATACATATACAAACATATTTGAAACAATACTTAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGCGTACATACATATACAAACATATTTGAAACAATACTTAATGA  550

seq1  GAAAAGAGACCCTGCCCTTCACTGGCTGCTGCACTAGGGGGAGTGGGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGACCCTGCCCTTCACTGGCTGCTGCACTAGGGGGAGTGGGCCC  600

seq1  TGCTTCTCCTCTGGGCAGCACAGTTCAGTTGTCCCTAGAAGAAGAGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCCTCTGGGCAGCACAGTTCAGTTGTCCCTAGAAGAAGAGGCAC  650

seq1  ATATCATCAGGCCTAAGTGCCAGGTGGACTCACAATTCCTCTGCTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCAGGCCTAAGTGCCAGGTGGACTCACAATTCCTCTGCTGTGTG  700

seq1  GTGGCATGGGTTCAGGGGTGATGTTTGTTGTGACCCCAGTGGTGGTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATGGGTTCAGGGGTGATGTTTGTTGTGACCCCAGTGGTGGTACTG  750

seq1  GCCAGGTATAGCAGGCTGGTCCTTCCAGCCCTCATGCC-TTCAGG-TTTC  798
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GCCAGGTATAGCAGGCTGGTCCTTCCAGCCCTCATGCCTTTCAGGTTTTC  800

seq1  TAGTTCCATCCCTC-TTCATAATGTGCAAGCTG-TTCCATTTCT--CCTT  844
      |||||||||||||| |||||||||||||||||| ||||||||||  | ||
seq2  TAGTTCCATCCCTCTTTCATAATGTGCAAGCTGTTTCCATTTCTTCCTTT  850

seq1  CTCT-CCCATCTGAAAA--TCGCCTACTCACACA-TTGT-GGAGTTGTGA  889
      |||| ||||||||||||   |||||||||||||| |||| ||||||||||
seq2  CTCTCCCCATCTGAAAAATCCGCCTACTCACACATTTGTGGGAGTTGTGA  900

seq1  GCAGC-TTTGAGCCTGG--CCCTGCAGCT-GGCGGCCCTGAGTGACATCA  935
      ||||| |||||||||||  || ||||||| ||||||||||||||||||||
seq2  GCAGCTTTTGAGCCTGGGCCCTTGCAGCTGGGCGGCCCTGAGTGACATCA  950

seq1  TTCGCCTGA-TTTGCTCCAAA-GAACACCACCACC-AAAAAGGTATCTGT  982
      |||| |||| ||||||||||| ||||||||||||| ||||||||||||||
seq2  TTCG-CTGATTTTGCTCCAAAGGAACACCACCACCAAAAAAGGTATCTGT  999

seq1  CTGACCA-TTGCCAGGGT-TGGGGGAAGGGAACTCCTCCTT-ACTTTTA-  1028
      ||||||| |||||||| |  ||||||| ||||||||||||| ||||||| 
seq2  CTGACCATTTGCCAGGTTGGGGGGGAAAGGAACTCCTCCTTAACTTTTAT  1049

seq1  CATTAAA-GATTAC-ATAT  1045
      ||||||| |||||| ||||
seq2  CATTAAATGATTACGATAT  1068


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