BAC Information

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BAC

Clone NameB6Ng01-300L01
Chromosome14 (Build37)
Map Location 47,472,168 - 47,680,123
singlet/doubletdoublet
Overlap geneCgrrf1, Samd4
Upstream geneLOC666834, LOC100041685, LOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb
Downstream geneGch1, Wdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300L01.bB6Ng01-300L01.g
ACCGA095202GA095203
length754636
definitionB6Ng01-300L01.b B6Ng01-300L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,472,168 - 47,472,919)(47,679,488 - 47,680,123)
sequence
gaattctcccatcacctctttctcatgagagtctctacgggagtgcaagc
ttttgtatacgtgtcaatcctgtgtgagagaaacaagtttgtttttgttt
gtttatcttcttgaggcgggggggggggcaggagtcatcattgaatgtca
ttccagccaccctgtactttatgtgtgttcatgtgtgcatgtatgtagga
gtgccatgtggaggcagaggtgagcatcagtgtcttcctcggctgctctc
cactctttttttgagacagggagttgcactgaactaagctcgctggttgg
ctagactggccagtgagctcctgggagcggcctgtctctgcctcccagcc
ctgatgttacagatgttacaaattgttagccagatgtccccaaactatgt
atttaatgaaaaaaatgaaacaaagcaaacaacaacaagacccttccctg
tgtctgtgccacaccatggttttgcacataactagtttttactttgaact
gtttcttctctgttgtccattcctctacttacgaatcggtaccatacagt
ttaatatttgatgaggttagggaacctctagctgatgagtgctctcctac
ctattcttacatgttcgttcctttttctgtgtgagtatttttagaaccag
gggatctagctctgtagtaaagcacactgatatttttattgagagcacaa
tgaatctgtaaattttcagtagaattaagatgtgtcagaaatctgatagc
aact
gaattccctgccaactgaggaaatattatttactcaacatttactagatg
ccatttgttcatgtcagactctgtgaaggcatgttcttgttatcaaggaa
tttgtgatccagagagcatgactgaatcctgtgcaaaaattataatagtt
ccagtctaagtgccgagaatacccaaatcctgtggtagtgcagaacaaag
aacacttgggtttgccaaggtagctggaggaagctccttacatcccactg
cttggaagaccagcagcttggagtccactgggaaaaccacgttgtagaag
ccatttcatacagtaggaacaacagaagcaaaagccagagccatggggac
atttagggtagagaaaacacctgttgaatggtggaaacagagacaaagtg
gggacacataggcaggtggtcaggtgcctgaaatatgaaatgtcaaaaca
aggaaagtagagttttgtcttgtgggcgatggaaagctattgaaatctgc
tcactggaaacctaggtgatatattagaaggatgacgttggtcatgggaa
ggtagctggagtctgtgagaaaggccagcctgtgagcttaggaaaccttg
aggaggacttgaggaaggtgggagggggatgaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_47472168_47472919
seq2: B6Ng01-300L01.b_47_800

seq1  GAATTCTCCCATCACCTCTTTCTCATGAGAGTCTCTACGGGAGTGCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCATCACCTCTTTCTCATGAGAGTCTCTACGGGAGTGCAAGC  50

seq1  TTTTGTATACGTGTCAATCCTGTGTGAGAGAAACAAGTTTGTTTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATACGTGTCAATCCTGTGTGAGAGAAACAAGTTTGTTTTTGTTT  100

seq1  GTTTATCTTCTTGAGGCGGGGGGGGGGGCAGGAGTCATCATTGAATGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTTCTTGAGGCGGGGGGGGGGGCAGGAGTCATCATTGAATGTCA  150

seq1  TTCCAGCCACCCTGTACTTTATGTGTGTTCATGTGTGCATGTATGTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCACCCTGTACTTTATGTGTGTTCATGTGTGCATGTATGTAGGA  200

seq1  GTGCCATGTGGAGGCAGAGGTGAGCATCAGTGTCTTCCTCGGCTGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATGTGGAGGCAGAGGTGAGCATCAGTGTCTTCCTCGGCTGCTCTC  250

seq1  CACTCTTTTTTTGAGACAGGGAGTTGCACTGAACTAAGCTCGCTGGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTTTTTGAGACAGGGAGTTGCACTGAACTAAGCTCGCTGGTTGG  300

seq1  CTAGACTGGCCAGTGAGCTCCTGGGAGCGGCCTGTCTCTGCCTCCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTGGCCAGTGAGCTCCTGGGAGCGGCCTGTCTCTGCCTCCCAGCC  350

seq1  CTGATGTTACAGATGTTACAAATTGTTAGCCAGATGTCCCCAAACTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTACAGATGTTACAAATTGTTAGCCAGATGTCCCCAAACTATGT  400

seq1  ATTTAATGAAAAAAATGAAACAAAGCAAACAACAACAAGACCCTTCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGAAAAAAATGAAACAAAGCAAACAACAACAAGACCCTTCCCTG  450

seq1  TGTCTGTGCCACACCATGGTTTTGCACATAACTAGTTTTTACTTTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGCCACACCATGGTTTTGCACATAACTAGTTTTTACTTTGAACT  500

seq1  GTTTCTTCTCTGTTGTCCATTCCTCTACTTACGAATCGGTACCATACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCTCTGTTGTCCATTCCTCTACTTACGAATCGGTACCATACAGT  550

seq1  TTAATATTTGATGAGGTTAGGGAACCTCTAGCTGATGAGTGCTCTCCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTGATGAGGTTAGGGAACCTCTAGCTGATGAGTGCTCTCCTAC  600

seq1  CTATTCTTACATGTTCGTTCCTTTTTCTGTGTGAGTA-TTTTAGAACCAG  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTATTCTTACATGTTCGTTCCTTTTTCTGTGTGAGTATTTTTAGAACCAG  650

seq1  GGGATCTAGCTCTGTAGTAAAGCACACTGATATTTTTATTGAGAGCACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTAGCTCTGTAGTAAAGCACACTGATATTTTTATTGAGAGCACAA  700

seq1  TGAATCTGTAAA-TTTCAGTAGAATTAAGATGTGTCAGAAATCTGATAGC  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAATCTGTAAATTTTCAGTAGAATTAAGATGTGTCAGAAATCTGATAGC  750

seq1  AACT  752
      ||||
seq2  AACT  754

seq1: chr14_47679488_47680123
seq2: B6Ng01-300L01.g_71_706 (reverse)

seq1  CCTTTCATCCCCCTCCCACCTTCCTCAAGTCCTCCTCAAGGTTTCCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATCCCCCTCCCACCTTCCTCAAGTCCTCCTCAAGGTTTCCTAAG  50

seq1  CTCACAGGCTGGCCTTTCTCACAGACTCCAGCTACCTTCCCATGACCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGCTGGCCTTTCTCACAGACTCCAGCTACCTTCCCATGACCAAC  100

seq1  GTCATCCTTCTAATATATCACCTAGGTTTCCAGTGAGCAGATTTCAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCTTCTAATATATCACCTAGGTTTCCAGTGAGCAGATTTCAATAG  150

seq1  CTTTCCATCGCCCACAAGACAAAACTCTACTTTCCTTGTTTTGACATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATCGCCCACAAGACAAAACTCTACTTTCCTTGTTTTGACATTTC  200

seq1  ATATTTCAGGCACCTGACCACCTGCCTATGTGTCCCCACTTTGTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCAGGCACCTGACCACCTGCCTATGTGTCCCCACTTTGTCTCTGT  250

seq1  TTCCACCATTCAACAGGTGTTTTCTCTACCCTAAATGTCCCCATGGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCATTCAACAGGTGTTTTCTCTACCCTAAATGTCCCCATGGCTCT  300

seq1  GGCTTTTGCTTCTGTTGTTCCTACTGTATGAAATGGCTTCTACAACGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGCTTCTGTTGTTCCTACTGTATGAAATGGCTTCTACAACGTGG  350

seq1  TTTTCCCAGTGGACTCCAAGCTGCTGGTCTTCCAAGCAGTGGGATGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAGTGGACTCCAAGCTGCTGGTCTTCCAAGCAGTGGGATGTAAG  400

seq1  GAGCTTCCTCCAGCTACCTTGGCAAACCCAAGTGTTCTTTGTTCTGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCCTCCAGCTACCTTGGCAAACCCAAGTGTTCTTTGTTCTGCACT  450

seq1  ACCACAGGATTTGGGTATTCTCGGCACTTAGACTGGAACTATTATAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGATTTGGGTATTCTCGGCACTTAGACTGGAACTATTATAATTT  500

seq1  TTGCACAGGATTCAGTCATGCTCTCTGGATCACAAATTCCTTGATAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGGATTCAGTCATGCTCTCTGGATCACAAATTCCTTGATAACAA  550

seq1  GAACATGCCTTCACAGAGTCTGACATGAACAAATGGCATCTAGTAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCCTTCACAGAGTCTGACATGAACAAATGGCATCTAGTAAATGT  600

seq1  TGAGTAAATAATATTTCCTCAGTTGGCAGGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAATAATATTTCCTCAGTTGGCAGGGAATTC  636