BAC Information

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BAC

Clone NameB6Ng01-300O11
Chromosome14 (Build37)
Map Location 69,635,449 - 69,636,521
singlet/doubletsinglet
Overlap genenone
Upstream geneNefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033, LOC100043082
Downstream geneStc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300O11.bB6Ng01-300O11.g
ACCGA095357GA095358
length7421,069
definitionB6Ng01-300O11.b B6Ng01-300O11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagttagaatggctaagataaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacataatactaccagaggatccagcaaaacctctcctgggc
atatatccagaagatgtcccaaccggtaagatggacacatgctctactat
gttcatatgtatcaaaagatgccctagtcggccatcactggaaagagagg
cccattggacttgcaaactttatatgccccagtacaggggaatgcctggg
ccaaaaagtgggagtgggtaggtaggggagtgtgagggcacagccctggc
tgagggtccctacccctcctaaagtccattgcctaccttttccatggctc
tcgattgttcttctctgtgtcagctgctgttgcacccaaggaaatgactc
tctatggcttcctgaagccctggctgggtgagtatctgaaagtgagggcc
actggactcccttgagggttaagggagggcacaacccatgcctactgtca
tggctgccctcccaggggatggggctcctgattgagtgctgg
gaattcctttcttttggatagattcccaatagtgagattgccagtcattt
gagagttgtactttatggttttggaggcactgccacgctgttttctataa
aggtggaggccaggattctaactggtggcatctcacagaggagagcggat
acaccgaacccagagataaccagtgtaggaatccaggatacatgaaagcc
ctgttatttgttctgcagccatgcctcccacatatgccacctactgccct
cagaaaacaacaatttgcttcctttattgtcctagtaagccctgtgttca
acttggcagaatcctttcaaagggaccaatggagcagaacatagagagaa
taagcctcaggcaagtgctctaggtgagaaagtcctctgctgctcctgac
catatgaacatgcctggacagggcccagagtgggctttggagttttcctg
ctgcccctgctgcccagctagcttattctccattggcaaggtcatttacc
tgttataaatatggcttcatatgactaaaatcttctgcctccacttattt
ggtaaggggtactagagggaacagaaatcttgcacacctgtatccatcag
gcttttatatttgtcacatctgatgtgacaagtgcattgaaagtcaaatt
actgagataagtgtgatagggcatgacttcactcacagcctttgggaggc
tgaggcaggaggattcaaggtaattttagctgcatagtaagaccctgtcc
ttgtcctcacctttcctaaacctcaaattattgaaggaaaaggattatgt
gttatttcagattttgtatttagattgcttctaagacaagcccatcagca
ggaataggaagaaaaaaagtgtgttaagtgccacataggtatttgatgct
caacaaaggcagtgtctgcgcacaccaacgtatttagcatgcttcatccc
ttatcaacactactaatttgtctaaatagaaattgcagctaacactgaat
gaatggtcacgtgtgtgctgagtgccacatttggagatattcacatttaa
aatggatcctaccctttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69635449_69636521
seq2: B6Ng01-300O11.g_69_1137 (reverse)

seq1  TCAAA-GGTAGGATCCCATTTTAAAATGTTGAATATTCTCCAAATGT-GC  48
      ||||| |||||||| ||||||| ||||| |||||| ||||||||||| ||
seq2  TCAAAGGGTAGGAT-CCATTTT-AAATG-TGAATA-TCTCCAAATGTGGC  46

seq1  ACTCAGCACACACGTGACCATTCATTCAGTGTTAGCCTGCAATTTCTATT  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTCAGCACACACGTGACCATTCATTCAGTGTTAG-CTGCAATTTCTATT  95

seq1  TAGACAAATTAGTAGTGTTGATAAGGGATGAAGCATGCTAAATACGTTGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAATTAGTAGTGTTGATAAGGGATGAAGCATGCTAAATACGTTGG  145

seq1  TGTGCGCAGACACTGCCTTTTGTTGAGCATCAAATACCTATGTGGCACTT  198
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTGCGCAGACACTGCC-TTTGTTGAGCATCAAATACCTATGTGGCACTT  194

seq1  AACACACTTTTTTTCTTCCTATTCCTGCTGATGGGCTTGTCTTAGAAGCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTTTTTTTCTTCCTATTCCTGCTGATGGGCTTGTCTTAGAAGCA  244

seq1  ATCTAAATACAAAATCTGAAATAACACATAATCCTTTTCCTTCAATAATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATACAAAATCTGAAATAACACATAATCCTTTTCCTTCAATAATT  294

seq1  TGAGGTTTAGGAAAGGTGAGGACAAGGACAGGGTCTTACTATGCAGCTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTAGGAAAGGTGAGGACAAGGACAGGGTCTTACTATGCAGCTAA  344

seq1  AATTACCTTGAATCCTCCTGCCTCAGCCTCCCAAAGGCTGTGAGTGAAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTTGAATCCTCCTGCCTCAGCCTCCCAAAGGCTGTGAGTGAAGT  394

seq1  CATGCCCTATCACACTTATCTCAGTAATTTGACTTTCAATGCACTTGTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCTATCACACTTATCTCAGTAATTTGACTTTCAATGCACTTGTCA  444

seq1  CATCAGATGTGACAAATATAAAAGCCTGATGGATACAGGTGTGCAAGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGATGTGACAAATATAAAAGCCTGATGGATACAGGTGTGCAAGATT  494

seq1  TCTGTTCCCTCTAGTACCCCTTACCAAATAAGTGGAGGCAGAAGATTTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCCCTCTAGTACCCCTTACCAAATAAGTGGAGGCAGAAGATTTTA  544

seq1  GTCATATGAAGCCATATTTATAACAGGTAAATGACCTTGCCAATGGAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGAAGCCATATTTATAACAGGTAAATGACCTTGCCAATGGAGAA  594

seq1  TAAGCTAGCTGGGCAGCAGGGGCAGCAGGAAAACTCCAAAGCCCACTCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAGCTGGGCAGCAGGGGCAGCAGGAAAACTCCAAAGCCCACTCTG  644

seq1  GGCCCTGTCCAGGCATGTTCATATGGTCAGGAGCAGCAGAGGACTTTCTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGTCCAGGCATGTTCATATGGTCAGGAGCAGCAGAGGACTTTCTC  694

seq1  ACCTAGAGCACTTGCCTGAGGCTTATTCTCTCTATGTTCTGCTCCATTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGCACTTGCCTGAGGCTTATTCTCTCTATGTTCTGCTCCATTGG  744

seq1  TCCCTTTGAAAGGATTCTGCCAAGTTGAACACAGGGCTTACTAGGACAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGAAAGGATTCTGCCAAGTTGAACACAGGGCTTACTAGGACAAT  794

seq1  AAAGGAAGCAAATTGTTGTTTTCTGAGGGCAGTAGGTGGCATATGTGGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGCAAATTGTTGTTTTCTGAGGGCAGTAGGTGGCATATGTGGGA  844

seq1  GGCATGGCTGCAGAACAAATAACAGGGCTTTCATGTATCCTGGATTCCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGCTGCAGAACAAATAACAGGGCTTTCATGTATCCTGGATTCCTA  894

seq1  CACTGGTTATCTCTGGGTTCGGTGTATCCGCTCTCCTCTGTGAGATGCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTTATCTCTGGGTTCGGTGTATCCGCTCTCCTCTGTGAGATGCCA  944

seq1  CCAGTTAGAATCCTGGCCTCCACCTTTATAGAAAACAGCGTGGCAGTGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTAGAATCCTGGCCTCCACCTTTATAGAAAACAGCGTGGCAGTGCC  994

seq1  TCCAAAACCATAAAGTACAACTCTCAAATGACTGGCAATCTCACTATTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACCATAAAGTACAACTCTCAAATGACTGGCAATCTCACTATTGG  1044

seq1  GAATCTATCCAAAAGAAAGGAATTC  1073
      |||||||||||||||||||||||||
seq2  GAATCTATCCAAAAGAAAGGAATTC  1069