BAC Information

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BAC

Clone NameB6Ng01-301F23
Chromosome14 (Build37)
Map Location 97,565,073 - 97,744,497
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301F23.bB6Ng01-301F23.g
ACCGA095700GA095701
length1,0071,087
definitionB6Ng01-301F23.b B6Ng01-301F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,565,073 - 97,566,081)(97,743,402 - 97,744,497)
sequence
gaattcaacagaaataatttcatatatgaggaaataaattatgtatagac
atatgcgagatgtggcatatggcatagagtttcatgtgtgttgtacaggc
aaaacttagctaaattgactactgagtccatgccttggcaggagcttggc
aagtctggcagttttcctgaagcaatcactacataatttcttatccactt
tgaggagatttgctcttttcaattggagaagcaccaggggtgattactca
ttcagttttctgtgctagtgaggcatactttcaggagaggatggggaaaa
agatctccaagataaacctaactgtggattaaaatggggttctgtgtctt
ttcagtgcaagggctcaggagtttgactgtgcggaccccaggccagtacc
aggcaggcattggattgtgagaaggtgtgggatccaattccggaggtgag
aaaggcacagtctggggtccccacagaagtgctcgagttgggtttctttc
ttttttttaaattttattatatttttattaggtattttcctcgtttacat
tttcaatgctatcccaaaagtccgccatacccacccccacaatccactac
ccacccactcccccgttttggccctagggttcccctgtactgggagatat
acagtttgcaagtccaaatgggcctctctttgcagtgatggccgactagg
ccatcttttgatacatatgcagctagagtcaagcgctccgggtactggtt
agttcataatgttgttccacctatagggttgcagttccctttagctcctt
gggtaatttctctagctcctccattgggggccgtgtgatccatccaatag
ctgactgtgatcatccacttctgtgtttgctaggcctccggcatagtctc
acaagagacagctatatggggtcctttcagcaaaatcttgctagtgtatg
catgtgtcagcgtttggagctgattatgggataggtcctgcatatggcat
cactaga

gaattccatgaagtaattttgagttgtgtgttctgtaaaatgtgctttcc
ttggaagatggaatgtttcactctagaagaaattgctaaacaatatattt
taaatagtgagtgagttttttcttgcaggtggactataatgcaaattcac
acacatattactaaatatttatagccaaaatatttctttatttaatcact
gatttaaagttaagctagttttctattttgtgtctagttttgtatgaatt
aataagtgtattaaataaactacagaaaaaaatgactaatataatttcca
ctttcacttctggtaaacactgaaaatctctgatgagaaaatagaagata
aatatagaataaagccataagcatgctatgcaaattatgaataataaatt
ggacacattgatttgattcttagaaggtgtagtagattgaaagaagaagt
ctgtcaactaagtttttgacaggtgtcaaatacagagtactattttttta
atgagattaagtaattggcagagtatgctctgtgcacttttgatattagc
tacaccacagtttacttttattgatatgaagatgacttaagcaatgtaca
tgttctgaaaaacaagtgacattaagaactgatttatttggttgtagtca
agatgttttaacgttcaagttttatagcaattcagcttatatttagaaga
gtattagacatttgcatttcttattataattcagttgctattctcatata
agactgtggagaaattctatacacctcaagtgccttaggtcaaaagaatc
accttccatagacaagtgggtaatggtaattgaactttttgagttatcac
aaacaaacaaacaaacaaacaaaacataataccagcaacaaaactcgaac
aaacaaccaaataaaagccaaaaaaatcatgatattcggaatttcagagt
aaggcatgttgatgagaccatggagggtttggttgaggaacactggagtg
aatgtgattatatgtgtgtacatatgtggtggaattctagactaaagagc
agtgcaaatgattcctgttacttcaacttattacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97565073_97566081
seq2: B6Ng01-301F23.b_43_1049

seq1  GAATTCAACAGAAATAATTTCATATATGAGGAAATAAATTATGTATAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGAAATAATTTCATATATGAGGAAATAAATTATGTATAGAC  50

seq1  ATATGCGAGATGTGGCATATGGCATAGAGTTTCATGTGTGTTGTACAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCGAGATGTGGCATATGGCATAGAGTTTCATGTGTGTTGTACAGGC  100

seq1  AAAACTTAGCTAAATTGACTACTGAGTCCATGCCTTGGCAGGAGCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAGCTAAATTGACTACTGAGTCCATGCCTTGGCAGGAGCTTGGC  150

seq1  AAGTCTGGCAGTTTTCCTGAAGCAATCACTACATAATTTCTTATCCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGCAGTTTTCCTGAAGCAATCACTACATAATTTCTTATCCACTT  200

seq1  TGAGGAGATTTGCTCTTTTCAATTGGAGAAGCACCAGGGGTGATTACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGATTTGCTCTTTTCAATTGGAGAAGCACCAGGGGTGATTACTCA  250

seq1  TTCAGTTTTCTGTGCTAGTGAGGCATACTTTCAGGAGAGGATGGGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTCTGTGCTAGTGAGGCATACTTTCAGGAGAGGATGGGGAAAA  300

seq1  AGATCTCCAAGATAAACCTAACTGTGGATTAAAATGGGGTTCTGTGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCCAAGATAAACCTAACTGTGGATTAAAATGGGGTTCTGTGTCTT  350

seq1  TTCAGTGCAAGGGCTCAGGAGTTTGACTGTGCGGACCCCAGGCCAGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCAAGGGCTCAGGAGTTTGACTGTGCGGACCCCAGGCCAGTACC  400

seq1  AGGCAGGCATTGGATTGTGAGAAGGTGTGGGATCCAATTCCGGAGGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCATTGGATTGTGAGAAGGTGTGGGATCCAATTCCGGAGGTGAG  450

seq1  AAAGGCACAGTCTGGGGTCCCCACAGAAGTGCTCGAGTTGGGTTTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCACAGTCTGGGGTCCCCACAGAAGTGCTCGAGTTGGGTTTCTTTC  500

seq1  TTTTTTTTAAATTTTATTATATTTTTATTAGGTATTTTCCTCGTTTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAATTTTATTATATTTTTATTAGGTATTTTCCTCGTTTACAT  550

seq1  TTTCAATGCTATCCCAAAAGTCCGCCATACCCACCCCCACAATCCACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGCTATCCCAAAAGTCCGCCATACCCACCCCCACAATCCACTAC  600

seq1  CCACCCACTCCCCCGTTTTGGCCCTAGGGTTCCCCTGTACTGGGAGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCCCCGTTTTGGCCCTAGGGTTCCCCTGTACTGGGAGATAT  650

seq1  ACAGTTTGCAAGTCC-AATGGGCCTCTCTTTGCAGTGATGGCCGACTAGG  699
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGCAAGTCCAAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGG  700

seq1  CCATCTTTTGATACATATGCAGCTAGAGTCAAGCGCTCCGGGTACTGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTTGATACATATGCAGCTAGAGTCAAGCGCTCCGGGTACTGGTT  750

seq1  AGTTCATAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAATGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTT  800

seq1  GGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTGTGATCCATCCAATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTGTGATCCATCCAATAG  850

seq1  CTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCC-CCGGCATAGTCTC  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCTCCGGCATAGTCTC  900

seq1  ACAAGAGACAGCTATAT-GGGTCCTTTCAGCAAAATCTTGCTAGTGTATG  947
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAAGAGACAGCTATATGGGGTCCTTTCAGCAAAATCTTGCTAGTGTATG  950

seq1  CAATGGTGTCAGCGTTTGGGAGCTGATTATGGGATAGGTCCCTGCATATG  997
      ||   |||||||||||| ||||||||||||||||||||| ||||||||||
seq2  CA--TGTGTCAGCGTTT-GGAGCTGATTATGGGATAGGT-CCTGCATATG  996

seq1  GCAATCACTAGA  1009
      || |||||||||
seq2  GC-ATCACTAGA  1007


seq1: chr14_97743402_97744497
seq2: B6Ng01-301F23.g_66_1152 (reverse)

seq1  TTTGTATTAAGTTTGAAGTAACAGGAATTCATTTTGCACCTGCTCTTTAG  50
      |||||| |||| ||||||||||||||| ||| |||||| |||||||||||
seq2  TTTGTAATAAG-TTGAAGTAACAGGAA-TCA-TTTGCA-CTGCTCTTTAG  46

seq1  TCTTAAGAATTCCA-CACATATGTACAACACAATATAATCACATTCAACT  99
      |||  ||||||||| ||||||||||| |||| |||||||||||||| |||
seq2  TCT--AGAATTCCACCACATATGTAC-ACAC-ATATAATCACATTC-ACT  91

seq1  CCAGTGTTCCTCAACCAAACCCTCCATGGTCTCATCAACATGCCTTACTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTCCTCAACCAAACCCTCCATGGTCTCATCAACATGCCTTACTC  141

seq1  TGAAATTCCGAATATCATGATTTTTTTGGCTTTTATTTGGTTGTTTGTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCCGAATATCATGATTTTTTTGGCTTTTATTTGGTTGTTTGTTC  191

seq1  GAGTTTTGTTGCTGGTATTATTGTTTTGTTTGTTTGTTTGTTTGTTTGTG  249
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGTTTTGTTGCTGGTATTA-TGTTTTGTTTGTTTGTTTGTTTGTTTGTG  240

seq1  ATAACTCAAAAAGTTCAATTACCATTACCCACTTGTCTATGGAAGGTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCAAAAAGTTCAATTACCATTACCCACTTGTCTATGGAAGGTGAT  290

seq1  TCTTTTGACCTAAGGCACTTGAGGTGTATAGAATTTCTCCACAGTCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGACCTAAGGCACTTGAGGTGTATAGAATTTCTCCACAGTCTTAT  340

seq1  ATGAGAATAGCAACTGAATTATAATAAGAAATGCAAATGTCTAATACTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATAGCAACTGAATTATAATAAGAAATGCAAATGTCTAATACTCT  390

seq1  TCTAAATATAAGCTGAATTGCTATAAAACTTGAACGTTAAAACATCTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATAAGCTGAATTGCTATAAAACTTGAACGTTAAAACATCTTGA  440

seq1  CTACAACCAAATAAATCAGTTCTTAATGTCACTTGTTTTTCAGAACATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACCAAATAAATCAGTTCTTAATGTCACTTGTTTTTCAGAACATGT  490

seq1  ACATTGCTTAAGTCATCTTCATATCAATAAAAGTAAACTGTGGTGTAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTTAAGTCATCTTCATATCAATAAAAGTAAACTGTGGTGTAGCT  540

seq1  AATATCAAAAGTGCACAGAGCATACTCTGCCAATTACTTAATCTCATTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAAAGTGCACAGAGCATACTCTGCCAATTACTTAATCTCATTAA  590

seq1  AAAAATAGTACTCTGTATTTGACACCTGTCAAAAACTTAGTTGACAGACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGTACTCTGTATTTGACACCTGTCAAAAACTTAGTTGACAGACT  640

seq1  TCTTCTTTCAATCTACTACACCTTCTAAGAATCAAATCAATGTGTCCAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCAATCTACTACACCTTCTAAGAATCAAATCAATGTGTCCAAT  690

seq1  TTATTATTCATAATTTGCATAGCATGCTTATGGCTTTATTCTATATTTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTCATAATTTGCATAGCATGCTTATGGCTTTATTCTATATTTAT  740

seq1  CTTCTATTTTCTCATCAGAGATTTTCAGTGTTTACCAGAAGTGAAAGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTTTCTCATCAGAGATTTTCAGTGTTTACCAGAAGTGAAAGTGG  790

seq1  AAATTATATTAGTCATTTTTTTCTGTAGTTTATTTAATACACTTATTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATTAGTCATTTTTTTCTGTAGTTTATTTAATACACTTATTAAT  840

seq1  TCATACAAAACTAGACACAAAATAGAAAACTAGCTTAACTTTAAATCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAAAACTAGACACAAAATAGAAAACTAGCTTAACTTTAAATCAGT  890

seq1  GATTAAATAAAGAAATATTTTGGCTATAAATATTTAGTAATATGTGTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATAAAGAAATATTTTGGCTATAAATATTTAGTAATATGTGTGTG  940

seq1  AATTTGCATTATAGTCCACCTGCAAGAAAAAACTCACTCACTATTTAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCATTATAGTCCACCTGCAAGAAAAAACTCACTCACTATTTAAAA  990

seq1  TATATTGTTTAGCAATTTCTTCTAGAGTGAAACATTCCATCTTCCAAGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTTTAGCAATTTCTTCTAGAGTGAAACATTCCATCTTCCAAGGA  1040

seq1  AAGCACATTTTACAGAACACACAACTCAAAATTACTTCATGGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATTTTACAGAACACACAACTCAAAATTACTTCATGGAATTC  1087


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