BAC Information

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BAC

Clone NameB6Ng01-301G11
Chromosome14 (Build37)
Map Location 89,163,810 - 89,164,809
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301G11.bB6Ng01-301G11.g
ACCGA095724GA095725
length9971,164
definitionB6Ng01-301G11.b B6Ng01-301G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagactcttctgggtaatagttcctcgggtttttaaagtgat
actttcactattatccaattagttccatttcagtaaatggttctaaagga
ttttgaatcagtaacagattagagtatatacttttctcataattgtatta
tttaaaataatgaggccgaaaacaaactgagcgtctatgaatagctcaat
ggacaaaggaaccacggtatgcatagacagtgaaacaacagcgtcagcct
ttaaacaaacaaacaaacaaacaaacaaatgtcttttgacacaacagact
tattcgacattgataaataatgctttgctttcacttatatgcagaatata
ttatattattcaccatgtataactacttcagtgctgataaaaaatgagca
ggtaaaataatactaaagatatacaaaatattcacaaggaataatactaa
taattatctttatacaaagctataatactcattagcataaacacacaaac
acaatttcttttcacctggagtgataatgttcccaccaagagccattgtc
cacctaaccaaaatctaaaaccagtcatgagaagttccatgctgtggatg
tttgttctagagactcacaaatattacaggctattgctctgacacattgt
ttcctgtcagagttataagataagcccctaatgctgaagatgtcacgcat
ataagaaataggtaccaaagacacctgaaatggaactgaccttaatgcat
catccctgaggaatggctttcatggcaccagaaagtgcaagcttccaacg
gaggaacacaaacagtctttcgcggcttactagcagggcatggtaatacc
taatggtgctgtagtgacatgcgtaccttggtattaaccaacacctagtt
ggggcttaaacctactgtacaaaatggacccattcctcctactggaaata
gttgactcccagggctagagagtcatggactttggagaaatcctaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaatctggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataacc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaaggtggatgctcacagtcggctatgggatggatcacatggcccca
atgaaggagctagagaagtaccaaagagctaagggatctgcacctatagt
tgaacaacatatgacttatcagtaccggagctcttgactctagctgcata
tgcatccaaagatgggctagtcgccatcactggaagagaagtccatgaac
ggcaactttaatgcctaggttcaggaactctaaggctcattaaagggaat
gtgcgtggtataag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89163810_89164809
seq2: B6Ng01-301G11.b_46_1042

seq1  GAATTCTTAAGACTCTTCTGGGTAATAGTTCCTCGGGTTTTTAAAGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGACTCTTCTGGGTAATAGTTCCTCGGGTTTTTAAAGTGAT  50

seq1  ACTTTCACTATTATCCAATTAGTTCCATTTCAGTAAATGGTTCTAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACTATTATCCAATTAGTTCCATTTCAGTAAATGGTTCTAAAGGA  100

seq1  TTTTGAATCAGTAACAGATTAGAGTATATACTTTTCTCATAATTGTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATCAGTAACAGATTAGAGTATATACTTTTCTCATAATTGTATTA  150

seq1  TTTAAAATAATGAGGCCGAAAACAAACTGAGCGTCTATGAATAGCTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATAATGAGGCCGAAAACAAACTGAGCGTCTATGAATAGCTCAAT  200

seq1  GGACAAAGGAACCACGGTATGCATAGACAGTGAAACAACAGCGTCAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGGAACCACGGTATGCATAGACAGTGAAACAACAGCGTCAGCCT  250

seq1  TTAAACAAACAAACAAACAAACAAACAAATGTCTTTTGACACAACAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAACAAACAAACAAACAAACAAATGTCTTTTGACACAACAGACT  300

seq1  TATTCGACATTGATAAATAATGCTTTGCTTTCACTTATATGCAGAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGACATTGATAAATAATGCTTTGCTTTCACTTATATGCAGAATATA  350

seq1  TTATATTATTCACCATGTATAACTACTTCAGTGCTGATAAAAAATGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATTCACCATGTATAACTACTTCAGTGCTGATAAAAAATGAGCA  400

seq1  GGTAAAATAATACTAAAGATATACAAAATATTCACAAGGAATAATACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATAATACTAAAGATATACAAAATATTCACAAGGAATAATACTAA  450

seq1  TAATTATCTTTATACAAAGCTATAATACTCATTAGCATAAACACACAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCTTTATACAAAGCTATAATACTCATTAGCATAAACACACAAAC  500

seq1  ACAATTTCTTTTCACCTGGAGTGATAATGTTCCCACCAAGAGCCATTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCTTTTCACCTGGAGTGATAATGTTCCCACCAAGAGCCATTGTC  550

seq1  CACCTAACCAAAATCTAAAACCAGTCATGAGAAGTTCCATGCTGTGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACCAAAATCTAAAACCAGTCATGAGAAGTTCCATGCTGTGGATG  600

seq1  TTTGTTCTAGAGACTCACAAATATTACAGGCTATTGCTCTGACACATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTAGAGACTCACAAATATTACAGGCTATTGCTCTGACACATTGT  650

seq1  TTCCTGTCAGAGTTATAAGATAAGCCCCTAATGCTGAAGATGTCACGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCAGAGTTATAAGATAAGCCCCTAATGCTGAAGATGTCACGCAT  700

seq1  ATAAGAAATAGGTACCAAAGACACCTGAAATGGAACTGACCTTAATGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAATAGGTACCAAAGACACCTGAAATGGAACTGACCTTAATGCAT  750

seq1  CATCCCTGAGGAATGGCTTTCATGGCACCAGAAAGTGCAAGCTTCCAACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGAGGAATGGCTTTCATGGCACCAGAAAGTGCAAGCTTCCAACG  800

seq1  GAGGAACACAAACAGTCTTTCGCGGCTTACTAGCAGGGCATGGTAATACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACACAAACAGTCTTTCGCGGCTTACTAGCAGGGCATGGTAATACC  850

seq1  TAATGGTGCTGTAGTGACATGCGTACCTTGGTATTAACCAACACCTAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTGCTGTAGTGACATGCGTACCTTGGTATTAACCAACACCTAGTT  900

seq1  GGGGCTTAAACCTACTGTACAAAATGGACCCATTCCTCCTACTGGAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTAAACCTACTGTACAAAATGGACCCATTCCTCCTACTGGAAATA  950

seq1  GTTGAACTCCCAGGGCTAGAGAAGTCATGGACTTTGGAGAAAATCCTACA  1000
      |||| |||||||||||||||| ||||||||||||||||| ||||||||||
seq2  GTTG-ACTCCCAGGGCTAGAG-AGTCATGGACTTTGGAG-AAATCCTACA  997