BAC Information

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BAC

Clone NameB6Ng01-302F06
Chromosome14 (Build37)
Map Location 79,045,679 - 79,225,146
singlet/doubletdoublet
Overlap geneDgkh, LOC673649
Upstream geneD230005D02Rik, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
Downstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302F06.bB6Ng01-302F06.g
ACCGA096403GA096404
length5481,087
definitionB6Ng01-302F06.b B6Ng01-302F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,045,679 - 79,046,232)(79,224,052 - 79,225,146)
sequence
ctgggttgcaaggcccacaacagtatgttctccttgcttgatggtttctt
tgaatgtaaacactttacaccctcctgtcagaatcacaatcaaatccaat
agtggcgtctttccaggtactgtgaccaaacacctcaggagaagcaagtg
agggggagaaggaacttatctgggctcacaggttgagaaaacaactccat
cccagtcagctctgtaggcacaggatcaggtaccatgctcctcaaccccc
catctttgtagagcaggggacagagaaaggagaggctaacactcactggg
ctttcttcttctgctcagtctaggctcacagtccaggggtggtgcaggac
acttgcaaggctagtaaatctgaacttagtagggccttgtctcacaataa
aatgtgaaataaaaaatgggggaaggaaggggagaaggggccacctctct
gtgaatattgaggacgggagaccctaggccggtacgtctccattggggtt
aattcagctgtccttagcattttccactgagctgtgtgtgaagttaca
tacattttgctgacatcctaaaagatgtacctagtttgctcctgggaaaa
attaaatagttctcaaaaaaaatgctatttcataagatggctcatccctt
aaaccccagcatctgggaggcagagacaggtggatctaatgagtcgaagc
tagcctggtctacatggtaagttcaggcaaccaggaatacatagtgagac
tatatcttaagaaagaaggaaaggagaaaccaagaaagaacaaagtgaag
aaaggaggcaggcagggaggaaaacagttctattttcatttaaaaatttc
acagcagcttgtgcccagagaaactcaactcagatcctcacaagaaggaa
agcagaagagctttaactgtcaccctggattgccctgagcctcatcctgt
tcagccaatctgactgtttattgcttgagtctagagctctggacaaagaa
gcaaatactcatgtcattagtgtgacagttgaagccaggaacacaatctc
cacctaaaccagtgattctctgcaatagacggagaggttctgaccctcag
gcgtatgtctgcagccatctctgatgtccctgactagggctatgcccttt
ttggcatctagtaagatgaagtcagagacagaggtcaaacaaacaacctg
cagtgaacaagacaagccctgaccacacagaaaataattagcaggcctac
cgtgtcagttgtctctatgctgaatagtgccaaccaggaagaatagctaa
ttcaaagaagaaactgaacctgcccattctccttcaaaacttactttttt
cttttccctcccaagcctcctttcctgtcaatcgtaacccactttacact
gggtgtgctgacccatgtatgaaatcccagtactcaggagctggagacca
aaggattgctgtgaagccaaggctaccctggcaatgtagtatcatgccag
ccaaatgcattaaaaaggtgagacttgtacaaagtcaaagcaccccaaaa
cccatccatttcatttttaaggcaaattagaatctttgggccctccctca
gtgtttatacctctcatatcaggcaatccatcactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79045679_79046232
seq2: B6Ng01-302F06.b_49_602

seq1  GAATTCCTGGGTTGCAAGGCCCACAACAGTATGTTCTCCTTGCTTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGTTGCAAGGCCCACAACAGTATGTTCTCCTTGCTTGATGG  50

seq1  TTTCTTTGAATGTAAACACTTTACACCCTCCTGTCAGAATCACAATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGAATGTAAACACTTTACACCCTCCTGTCAGAATCACAATCAAA  100

seq1  TCCAATAGTGGCGTCTTTCCAGGTACTGTGACCAAACACCTCAGGAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAGTGGCGTCTTTCCAGGTACTGTGACCAAACACCTCAGGAGAAG  150

seq1  CAAGTGAGGGGGAGAAGGAACTTATCTGGGCTCACAGGTTGAGAAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGGGGGAGAAGGAACTTATCTGGGCTCACAGGTTGAGAAAACAA  200

seq1  CTCCATCCCAGTCAGCTCTGTAGGCACAGGATCAGGTACCATGCTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCCAGTCAGCTCTGTAGGCACAGGATCAGGTACCATGCTCCTCA  250

seq1  ACCCCCCATCTTTGTAGAGCAGGGGACAGAGAAAGGAGAGGCTAACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCATCTTTGTAGAGCAGGGGACAGAGAAAGGAGAGGCTAACACTC  300

seq1  ACTGGGCTTTCTTCTTCTGCTCAGTCTAGGCTCACAGTCCAGGGGTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTTTCTTCTTCTGCTCAGTCTAGGCTCACAGTCCAGGGGTGGTG  350

seq1  CAGGACACTTGCAAGGCTAGTAAATCTGAACTTAGTAGGGCCTTGTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACACTTGCAAGGCTAGTAAATCTGAACTTAGTAGGGCCTTGTCTCA  400

seq1  CAATAAAATGTGAAATAAAAAATGGGGGAAGGAAGGGGAGAAGGGGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATGTGAAATAAAAAATGGGGGAAGGAAGGGGAGAAGGGGCCAC  450

seq1  CTCTCTGTGATTATTGAGGACGGGAGACCCTAGGCCGGTACCTCAGCATT  500
      |||||||||| |||||||||||||||||||||||||||||| ||  ||||
seq2  CTCTCTGTGAATATTGAGGACGGGAGACCCTAGGCCGGTACGTCTCCATT  500

seq1  GGGGTTAATTCAGCTGTCCTTAGCATTTTCCACTGAGCTGTGTGTGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAATTCAGCTGTCCTTAGCATTTTCCACTGAGCTGTGTGTGAAGT  550

seq1  TACA  554
      ||||
seq2  TACA  554

seq1: chr14_79224052_79225146
seq2: B6Ng01-302F06.g_72_1158 (reverse)

seq1  GCAGTTGATGGATTTTGCCTGAATATGAGAAGTATAAACACTGAGGGAGG  50
      |||| |||||||  ||||||| |||||||| |||||||||||||||||||
seq2  GCAG-TGATGGA--TTGCCTG-ATATGAGAGGTATAAACACTGAGGGAGG  46

seq1  G-CCAAAGATTTCTAATTTGCCTAAAAAATGAAAATGGATGGGTTTTTGG  99
      | ||||||| ||||||||||||| ||||||| ||||||||||| ||||||
seq2  GCCCAAAGA-TTCTAATTTGCCTTAAAAATG-AAATGGATGGG-TTTTGG  93

seq1  GTTGCTTTTGACTTTTGTTAACAAGTCTCACC-TTTTAATGCATTTGGCT  148
      | ||| |||||| |||||  |||||||||||| |||||||||||||||||
seq2  GGTGC-TTTGAC-TTTGT--ACAAGTCTCACCTTTTTAATGCATTTGGCT  139

seq1  GGCCTGATACTACATTGCCAGGGTAGCCTTGGCTTCACAGCAATCCTTTG  198
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGATACTACATTGCCAGGGTAGCCTTGGCTTCACAGCAATCCTTTG  189

seq1  GTCTCCAGCTCCTGAGTACTGGGATTTCATACATGGGTCAGCACACCCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGCTCCTGAGTACTGGGATTTCATACATGGGTCAGCACACCCAG  239

seq1  TGTAAAGTGGGTTACGATTGACAGGAAAGGAGGCTTGGGAGGGAAAAG-A  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTAAAGTGGGTTACGATTGACAGGAAAGGAGGCTTGGGAGGGAAAAGAA  289

seq1  AAAAGTAAGTTTTGAAGGAGAATGGGCAGGTTCAGTTTCTTCTTTGAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGTTTTGAAGGAGAATGGGCAGGTTCAGTTTCTTCTTTGAATT  339

seq1  AGCTATTCTTCCTGGTTGGCACTATTCAGCATAGAGACAACTGACACGGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTCTTCCTGGTTGGCACTATTCAGCATAGAGACAACTGACACGGT  389

seq1  AGGCCTGCTAATTATTTTCTGTGTGGTCAGGGCTTGTCTTGTTCACTGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCTAATTATTTTCTGTGTGGTCAGGGCTTGTCTTGTTCACTGCA  439

seq1  GGTTGTTTGTTTGACCTCTGTCTCTGACTTCATCTTACTAGATGCCAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTGTTTGACCTCTGTCTCTGACTTCATCTTACTAGATGCCAAAA  489

seq1  AGGGCATAGCCCTAGTCAGGGACATCAGAGATGGCTGCAGACATACGCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATAGCCCTAGTCAGGGACATCAGAGATGGCTGCAGACATACGCCT  539

seq1  GAGGGTCAGAACCTCTCCGTCTATTGCAGAGAATCACTGGTTTAGGTGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCAGAACCTCTCCGTCTATTGCAGAGAATCACTGGTTTAGGTGGA  589

seq1  GATTGTGTTCCTGGCTTCAACTGTCACACTAATGACATGAGTATTTGCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGTTCCTGGCTTCAACTGTCACACTAATGACATGAGTATTTGCTT  639

seq1  CTTTGTCCAGAGCTCTAGACTCAAGCAATAAACAGTCAGATTGGCTGAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCAGAGCTCTAGACTCAAGCAATAAACAGTCAGATTGGCTGAAC  689

seq1  AGGATGAGGCTCAGGGCAATCCAGGGTGACAGTTAAAGCTCTTCTGCTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGGCTCAGGGCAATCCAGGGTGACAGTTAAAGCTCTTCTGCTTT  739

seq1  CCTTCTTGTGAGGATCTGAGTTGAGTTTCTCTGGGCACAAGCTGCTGTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGTGAGGATCTGAGTTGAGTTTCTCTGGGCACAAGCTGCTGTGA  789

seq1  AATTTTTAAATGAAAATAGAACTGTTTTCCTCCCTGCCTGCCTCCTTTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAATGAAAATAGAACTGTTTTCCTCCCTGCCTGCCTCCTTTCT  839

seq1  TCACTTTGTTCTTTCTTGGTTTCTCCTTTCCTTCTTTCTTAAGATATAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGTTCTTTCTTGGTTTCTCCTTTCCTTCTTTCTTAAGATATAGT  889

seq1  CTCACTATGTATTCCTGGTTGCCTGAACTTACCATGTAGACCAGGCTAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATGTATTCCTGGTTGCCTGAACTTACCATGTAGACCAGGCTAGC  939

seq1  TTCGACTCATTAGATCCACCTGTCTCTGCCTCCCAGATGCTGGGGTTTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACTCATTAGATCCACCTGTCTCTGCCTCCCAGATGCTGGGGTTTAA  989

seq1  GGGATGAGCCATCTTATGAAATAGCATTTTTTTTGAGAACTATTTAATTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGCCATCTTATGAAATAGCATTTTTTTTGAGAACTATTTAATTT  1039

seq1  TTCCCAGGAGCAAACTAGGTACATCTTTTAGGATGTCAGCAAAATGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGAGCAAACTAGGTACATCTTTTAGGATGTCAGCAAAATGTA  1087