BAC Information

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BAC

Clone NameB6Ng01-302G08
Chromosome14 (Build37)
Map Location 4,660,441 - 4,661,580
singlet/doubletsinglet
Overlap geneLOC100040928
Upstream geneLOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917
Downstream geneEG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302G08.bB6Ng01-302G08.g
ACCGA096455GA096456
length1,170982
definitionB6Ng01-302G08.b B6Ng01-302G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatcattaaatcacaacatgagaagacaatgttggatatgga
taaaatgacccagtccataattgcttccatgaagttctccgaggaactgt
taaaagataactattcctacaggtgagtcagtgacacaactgagaccccc
agaactaggcaggaaatgcttctgtccttttaggactttgaaaaaacgca
agggctctggttctatgttatctttttttttttatttaggaaccctgccc
tgaggcaagggtcttggatttgtacctcttggactcatttgtcctaagtg
tgaaaagtgtccaagaccctccaatctttattcttccaaattcaaggccc
tctacatagaaaacttttccaccacgctgggaatatccaggaaccctgaa
cctctagggttctgaccacagattaaaagatctaggattccagacaaaaa
tggaaatagtgtacacatgttgggtcagctcaactctctcagaggagata
agccctctccctgctgaaggttttatggtaccacagacctataatcaacc
atgaagaacatttcctcttctgtgatgtatagggtgcactcttggtgtca
gggctttcagaagtttgttgagtcctgtggaacatgggcggtatcttgat
ttgacctgcctctgtttgctgctgctatgtatactgtagactcttctggg
actgtctggggttcagggcccttgtgggaccatgggacttgtagtagtgg
caagccaatggaatctggctgggaatcaccaattttttttttttttgtgg
atcagcatcaagcagaaacacccgcctccgtgagtgcactcaactaaaag
gaaaaaagtgagggatattaccgaatgagaacagaaagggtgctgttggg
agcaggcttggaaatgcaagtgtcccgtgggggaagaaaaagaggttctg
ttgaaggaaggccagcaagaacatcttgtgcctcaagtgcccaaggagca
gcaggtagggatgatgtgtatcagaaggcagattgcccctcatgttctta
accataaacatagacatcccatgcaacaagttccaccactctccaaggca
ctcacctattgtctcctccaagtgtttgattaatgtgatccatctacagg
acttctctcctggtggaggt
gaattccttgatccacttaaatttgaccttagtacaaggagataggaatg
gatcaattcccattcttctacatgttacccgccagtagtgccagcaccat
tttttgaaaatgctgtcttttctccactggatggttttagctcccttgtc
aaggatcaaatgaccataggtgtgtgggttcatttctgtgtattcaattt
tattccattggtctacttgtctatcgttataccaagaccatgcaattttt
gatcacaatgctctgtagtacagctttaggtcaggctaccaacaacaatt
tttaaaaaaccttctgagggatggaattacaagcttgtaccaaatctggt
caacttttgtatgtatttccgccagaggttcttttatcctggagaacagt
ttttgctatcctaggttttttgtaattccagatgaatttgcagattgccc
tttctaattcattgaagaattgagttggaattttgatgaagattgcattg
aatctgtagattgcatttgacaagatagccatttttactatattgatcct
gccaatccatgagcatagaagatctttccatcttctgagatcttctttaa
tttctttcttcagagacttgaagttcttatcatacagatcttttacttcc
ttagttagagtcacaccaaggtattttctattggtttttactcttgtgaa
cagtgttgtttccctaatttctttctcagcccatttcaaaagaccaagtc
agaatcagtgtcaatctcttactccctgcagatcaggatgttagttagct
cttagctgttgctctagcactaggcctgcctgtctgcggccatacttcca
accatgatgaccttggactatatgaaactctaagcaagccctcagttaaa
agcttcattgtatcttacattgtttgtagtatttcatcacagtaatagaa
cagtgactaccacagcaggaaagagtttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4660441_4661580
seq2: B6Ng01-302G08.b_44_1213

seq1  GAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGA  50

seq1  TAAAATGACCCAGTCCATAATTGCTTCCATGAAGTTCTCCGAGGAACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGACCCAGTCCATAATTGCTTCCATGAAGTTCTCCGAGGAACTGT  100

seq1  TAAAAGATAACTATTCCTACAGGTGAGTCAGTGACACAACTGAGACCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATAACTATTCCTACAGGTGAGTCAGTGACACAACTGAGACCCCC  150

seq1  AGAACTAGGCAGGAAATGCTTCTGTCCTTTTAGGACTTTGAAAAAACGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAGGCAGGAAATGCTTCTGTCCTTTTAGGACTTTGAAAAAACGCA  200

seq1  AGGGCTCTGGTTCTATGTTATCTTTTTTTTTTTATTTAGGAACCCTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTGGTTCTATGTTATCTTTTTTTTTTTATTTAGGAACCCTGCCC  250

seq1  TGAGGCAAGGGTCTTGGATTTGTACCTCTTGGACTCATTTGTCCTAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAGGGTCTTGGATTTGTACCTCTTGGACTCATTTGTCCTAAGTG  300

seq1  TGAAAAGTGTCCAAGACCCTCCAATCTTTATTCTTCCAAATTCAAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTGTCCAAGACCCTCCAATCTTTATTCTTCCAAATTCAAGGCCC  350

seq1  TCTACATAGAAAACTTTTCCACCACGCTGGGAATATCCAGGAACCCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAGAAAACTTTTCCACCACGCTGGGAATATCCAGGAACCCTGAA  400

seq1  CCTCTAGGGTTCTGACCACAGATTAAAAGATCTAGGATTCCAGACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGGGTTCTGACCACAGATTAAAAGATCTAGGATTCCAGACAAAAA  450

seq1  TGGAAATAGTGTACACATGTTGGGTCAGCTCAACTCTCTCAGAGGAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATAGTGTACACATGTTGGGTCAGCTCAACTCTCTCAGAGGAGATA  500

seq1  AGCCCTCTCCCTGCTGAAGGTTTTATGGTACCACAGACCTATAATCAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTCCCTGCTGAAGGTTTTATGGTACCACAGACCTATAATCAACC  550

seq1  ATGAAGAACATTTCCTCTTCTGTGATGTATAGGGTGCACTCTTGGTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAACATTTCCTCTTCTGTGATGTATAGGGTGCACTCTTGGTGTCA  600

seq1  GGGCTTTCAGAAGTTTGTTGAGTCCTGTGGAACATGGGCGGTATCTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTCAGAAGTTTGTTGAGTCCTGTGGAACATGGGCGGTATCTTGAT  650

seq1  TTGACCTGCCTCTGTTTGCTGCTGCTATGTATACTGTAGACTCTTCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGCCTCTGTTTGCTGCTGCTATGTATACTGTAGACTCTTCTGGG  700

seq1  ACTGTCTGGGGTTCAGGGCCCTTGTGGGACCATGGGACTTGTAGTAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGGGGTTCAGGGCCCTTGTGGGACCATGGGACTTGTAGTAGTGG  750

seq1  CAAGCCAATGGAATCTGGCTGGGAATCACCAA--TTTTTTTTTTTTGTGG  798
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CAAGCCAATGGAATCTGGCTGGGAATCACCAATTTTTTTTTTTTTTGTGG  800

seq1  ATCAGCATCAAGCAGAAACA-CCGCCTCCGTGAGTGCACTCAACTAAA--  845
      |||||||||||||||||||| |||||||||||||||||||||||||||  
seq2  ATCAGCATCAAGCAGAAACACCCGCCTCCGTGAGTGCACTCAACTAAAAG  850

seq1  GGAAAAAGTGA-GGATATTACCGAATGAGAACAGAAA-GGTGCTGTT-GG  892
      | ||||||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  GAAAAAAGTGAGGGATATTACCGAATGAGAACAGAAAGGGTGCTGTTGGG  900

seq1  AGCAGGCT--GGAATGCAAGTGTCCCGT-GGGGAAG-AAAAGAGGTTCTG  938
      ||||||||  | |||||||||||||||| ||||||| |||||||||||||
seq2  AGCAGGCTTGGAAATGCAAGTGTCCCGTGGGGGAAGAAAAAGAGGTTCTG  950

seq1  -TGA--GGAGGCCAGCAAGAACATC-TGTGCCTCAAGTG-CCAAGGAGCA  983
       |||  | ||||||||||||||||| ||||||||||||| ||||||||||
seq2  TTGAAGGAAGGCCAGCAAGAACATCTTGTGCCTCAAGTGCCCAAGGAGCA  1000

seq1  GCAGGTA-GGATGATGTGTATCAG-AGGCAGATTG-CCCTCATGT--CTA  1028
      ||||||| |||||||||||||||| |||||||||| |||||||||   ||
seq2  GCAGGTAGGGATGATGTGTATCAGAAGGCAGATTGCCCCTCATGTTCTTA  1050

seq1  ACCATAAACATAGACAATCCAATGCAACA--GTCCACCAACTTCTCC-AG  1075
      ||||||||||||||| |||| ||||||||   |||||||   ||||| ||
seq2  ACCATAAACATAGAC-ATCCCATGCAACAAGTTCCACCA--CTCTCCAAG  1097

seq1  GCACTCACCTA-TGTCTCCTCCAAGTGTTTG-TTTATGTGAT-CATCTAC  1122
      ||||||||||| ||||||||||||||||||| || ||||||| |||||||
seq2  GCACTCACCTATTGTCTCCTCCAAGTGTTTGATTAATGTGATCCATCTAC  1147

seq1  AGGGC-TCTCT----GTGGAGGT  1140
      ||| | |||||    ||||||||
seq2  AGGACTTCTCTCCTGGTGGAGGT  1170