BAC Information

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BAC

Clone NameB6Ng01-302H04
Chromosome14 (Build37)
Map Location 42,576,011 - 42,577,089
singlet/doubletsinglet
Overlap genenone
Upstream geneSh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849
Downstream gene1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302H04.bB6Ng01-302H04.g
ACCGA096493GA096494
length1,1791,078
definitionB6Ng01-302H04.b B6Ng01-302H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagccaaagcttgtcaataaacagtgaatgatttatgaataga
tgggaaacttcatggtgcatgcagaattcaagttctggtctcaggaagta
aagaatttttcttgaatggaaacactacaaaactctcagtagagttcagg
aaaaggtggatgggcctcattcttactttggacctattgtacccaaatac
agggagggattcatccctatactatttgattggaatgcctgctgcattgc
tttccaggctcagagataatcagctacccaaactataactattacttttt
cattacccgttttctccagttctccataaaggttattcatctgactacct
gagagacagagtgggcttctgattaccccaccatccccccagacaccttg
gacctttgtcatagtgatattgcatagctcaagatggtagacaaagacaa
cacaatcaatttggaaaggctttacatgatttttccactattttactgga
gagtttaggtagcattttagcatgcattcagcacacccaggtcaagaagg
cagaaggaacagatgtcaatgccagagcccctcctgaaattatggatcca
ttaaaattgaggtttcactggacctgaggccttttcatctcctatccatc
caattgagtcttaggtatcttatgaatacaggatcatattccaatctcca
acagactcaggcctagaaaaggaactcaaaaatgtagaaactggagaagt
gagagctaatgggactgcgaagaagcaatccaatgtccctgttggccttt
gttcacagatgcctattttgtctggttgttttggagatagagagaatgtg
ggattttagctttttaagaaagggatataaactttacaacttgatgttgc
ccctgtccctgacttcttctcttgccaagtacaagggagttttcattgca
aaaaaaaaaaaaaaaatgggggttgtaaatcagagatttcatgaaaaccc
ctatgctcactttaatgaacaatgtctcctctcaaggcagttgcacacta
acacatatactccaacttgtgtaaggtgaaggtgcaggagtagtttctgt
catctggaacagagaacacactggtaatcgactgattggatactgactga
actccagttagtagaaattaatatagtga
gaattccagatacagcctttttgcacatgatacttgattgctttgttcag
aggatatttgctctttgagccatgctctaccacaggatgaacactgaatt
caccatcattaaatcacaacatgagaagacaatgttggatatggaaaaaa
tgaagcagtcaataagtgattccattgacaagtacaaggaattcatagaa
gataatgattcctacaggtgagtcccagacacagctgagacccagcacta
ggcagggaatgcttgtggccttctaggactttgtacaaaagtgagagctc
tagtcctatactctctgtttcttaataggagccctcccttgaggcatggg
tcttggatttgtacctcttagactcaggtttcctaagtgtgaatattgtc
caagaccctccagtctttattcttccaaattcaggatcttctgcatagaa
atcatttccaccatgctggggatctcaagcaaccctgaacttctagggtt
ctgacagcagattacaagatctgggatccatgacaaaaatggaaagagtt
tataccttttgggtcttctctcctccctaagatggcattgccctctccct
actgatggttttctggtactacacacatataagcaaccatgaggaagttt
tcctcttctgtgatgtatatggaacactcttggtgtagggttatcagaaa
tattttgagtcttcttacatgtggctggtctctggatttgacctgcctct
atttggtacttatggatatacagtggactctagtcttgggctgtctgggg
atcagagccctttgcagggatcataatatttggaagagtggcaggcaaat
cgaagataggtgggaaatcaacatttatgttttatttgtttgtgggttca
gcatcaggcacaccccacctcctgaagaatgcaatcaattgaaaggaaaa
agtaagatgttgctgatgagaacagaaagctgctggtagagcagctgacc
aggaggcatcctttggtgaagaaaagagttctgtgatgagaccagccaga
catacattccagtgcaaggcagcagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42576011_42577089
seq2: B6Ng01-302H04.g_68_1145

seq1  GAATTCCAGATACAGCCTTTTTGCACATGATACTTGATTGCTTTGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATACAGCCTTTTTGCACATGATACTTGATTGCTTTGTTCAG  50

seq1  AGGATATTTGCTCTTTGAGCCATGCTCTACCACAGGATGAACACTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATTTGCTCTTTGAGCCATGCTCTACCACAGGATGAACACTGAATT  100

seq1  CACCATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCATTAAATCACAACATGAGAAGACAATGTTGGATATGGAAAAAA  150

seq1  TGAAGCAGTCAATAAGTGATTCCATTGACAAGTACAAGGAATTCATAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGTCAATAAGTGATTCCATTGACAAGTACAAGGAATTCATAGAA  200

seq1  GATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGAGACCCAGCACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGAGACCCAGCACTA  250

seq1  GGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAAAAGTGAGAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAAAAGTGAGAGCTC  300

seq1  TAGTCCTATACTCTCTGTTTCTTAATAGGAGCCCTCCCTTGAGGCATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTATACTCTCTGTTTCTTAATAGGAGCCCTCCCTTGAGGCATGGG  350

seq1  TCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGTGTGAATATTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGTGTGAATATTGTC  400

seq1  CAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATCTTCTGCATAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATCTTCTGCATAGAA  450

seq1  ATCATTTCCACCATGCTGGGGATCTCAAGCAACCCTGAACTTCTAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCCACCATGCTGGGGATCTCAAGCAACCCTGAACTTCTAGGGTT  500

seq1  CTGACAGCAGATTACAAGATCTGGGATCCATGACAAAAATGGAAAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCAGATTACAAGATCTGGGATCCATGACAAAAATGGAAAGAGTT  550

seq1  TATACCTTTTGGGTCTTCTCTCCTCCCTAAGATGGCATTGCCCTCTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTTTGGGTCTTCTCTCCTCCCTAAGATGGCATTGCCCTCTCCCT  600

seq1  ACTGATGGTTTTCTGGTACTACACACATATAAGCAACCATGAGGAAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGTTTTCTGGTACTACACACATATAAGCAACCATGAGGAAGTTT  650

seq1  TCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTAGGGTTATCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTAGGGTTATCAGAAA  700

seq1  TATTTTGAGTCTTCTTACATGTGGCTGGTCTCTGGATTTGACCTGCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAGTCTTCTTACATGTGGCTGGTCTCTGGATTTGACCTGCCTCT  750

seq1  ATTTGGTACTTATGGATATACAGTGGACTCTAGTCTTGGGCTGTCTGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTACTTATGGATATACAGTGGACTCTAGTCTTGGGCTGTCTGGGG  800

seq1  ATCAGAGCCC-TTGCAGGGATCATAATATTTGGAAGAGTGGCAGGCAAAT  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCCCTTTGCAGGGATCATAATATTTGGAAGAGTGGCAGGCAAAT  850

seq1  CGAAGATAGGTGGG-AATCAACATTTATGTTTTATTTGTTTGT-GGTTCA  897
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  CGAAGATAGGTGGGAAATCAACATTTATGTTTTATTTGTTTGTGGGTTCA  900

seq1  GCATCAGGCACA-CCCACCTCCTGAAAGAATGCAATCAATTG-AAGGAAA  945
      |||||||||||| ||||||||||| ||||||||||||||||| |||||||
seq2  GCATCAGGCACACCCCACCTCCTG-AAGAATGCAATCAATTGAAAGGAAA  949

seq1  AAGTAAGGATGTTGCTGAATGAGAACAGAAAGCTGCTGGTAGAGCAGGCT  995
      |||||| |||||||||| |||||||||||||||||||||||||||| |||
seq2  AAGTAA-GATGTTGCTG-ATGAGAACAGAAAGCTGCTGGTAGAGCA-GCT  996

seq1  GACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATGAGACCAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATGAGACCAGC  1046

seq1  AAGAACATACATCCCAAGTGCAAAGCAGCAGCAG  1079
       || |||||||| || ||||||| ||||||||||
seq2  CAG-ACATACATTCC-AGTGCAAGGCAGCAGCAG  1078