BAC Information

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BAC

Clone NameB6Ng01-304F13
Chromosome14 (Build37)
Map Location 120,736,954 - 120,897,139
singlet/doubletdoublet
Overlap geneMbnl2, Rap2a
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304F13.bB6Ng01-304F13.g
ACCGA097927GA097928
length836115
definitionB6Ng01-304F13.b B6Ng01-304F13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,736,954 - 120,737,791)(120,897,025 - 120,897,139)
sequence
gaattccagtcgaaccagtgtgttctcactggaatgcgaagccatgaaca
gagaaacttgacttcctggagcacttcagacaggtgtattcatttccgtg
ttctgcaagcaaccatttagtccccagcagagccaagagctgaatcgggt
tcctgaacaaaaagctggggcttctcacagagtttgcagttgttctggag
aaacaatgacagggcagccaccaactcaagatcagaacaggttgaagtag
acaccaggccagaagagctgctgagcagacacacagtccaccctccctgt
gaccttggctttgtttgatttgcaaacataagcaaaccttgcactccact
cgccattccttctaagtgcctccactaaaacaaaagggggcccaagcaca
gccaatcccgggcacccagcaactgaattgctctttgtccaaataaactc
tttaagcttttattgtccctcggtttactttttaacaaaggaaaataacc
ataatgtatcaaaggccctattcattcatgaaacactgagtgtccagtgt
gggtgcccttcagccaggcattggaaattagtgtgttgacctcatgtgct
gtcattctcttggggggtggggggcaacacacaaatcaaccagatatagg
tttcttctccttccaaaaatatgtttcttgtttcccaccttctgttgcaa
tggaaaagaagcaaggaattccaatggaaataatatccttagggacagtg
ttatgcagaagtgattgctagggagggagctgccttcaatgtgttgcttt
cagggctgagaccttgaggagggggagtggggagga

aagagtttaaaagtttgctgtgttcagacctgggacgtctgcatccttcc
ccttcacaggccctaacttctgttttaattcccaccaatatttaaatagg
agggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120736954_120737791
seq2: B6Ng01-304F13.b_43_878

seq1  GAATTCCAGTCGAACCAGTGTGTTCTCACTGGAATGCGAAGCCATGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCGAACCAGTGTGTTCTCACTGGAATGCGAAGCCATGAACA  50

seq1  GAGAAACTTGACTTCCTGGAGCACTTCAGACAGGTGTATTCATTTCCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTTGACTTCCTGGAGCACTTCAGACAGGTGTATTCATTTCCGTG  100

seq1  TTCTGCAAGCAACCATTTAGTCCCCAGCAGAGCCAAGAGCTGAATCGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAAGCAACCATTTAGTCCCCAGCAGAGCCAAGAGCTGAATCGGGT  150

seq1  TCCTGAACAAAAAGCTGGGGCTTCTCACAGAGTTTGCAGTTGTTCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACAAAAAGCTGGGGCTTCTCACAGAGTTTGCAGTTGTTCTGGAG  200

seq1  AAACAATGACAGGGCAGCCACCAACTCAAGATCAGAACAGGTTGAAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGACAGGGCAGCCACCAACTCAAGATCAGAACAGGTTGAAGTAG  250

seq1  ACACCAGGCCAGAAGAGCTGCTGAGCAGACACACAGTCCACCCTCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGGCCAGAAGAGCTGCTGAGCAGACACACAGTCCACCCTCCCTGT  300

seq1  GACCTTGGCTTTGTTTGATTTGCAAACATAAGCAAACCTTGCACTCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGGCTTTGTTTGATTTGCAAACATAAGCAAACCTTGCACTCCACT  350

seq1  CGCCATTCCTTCTAAGTGCCTCCACTAAAACAAAAGGGGGCCCAAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATTCCTTCTAAGTGCCTCCACTAAAACAAAAGGGGGCCCAAGCACA  400

seq1  GCCAATCCCGGGCACCCAGCAACTGAATTGCTCTTTGTCCAAATAAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCCCGGGCACCCAGCAACTGAATTGCTCTTTGTCCAAATAAACTC  450

seq1  TTTAAGCTTTTATTGTCCCTCGGTTTACTTTTTAACAAAGGAAAATAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTTTTATTGTCCCTCGGTTTACTTTTTAACAAAGGAAAATAACC  500

seq1  ATAATGTATCAAAGGCCCTATTCATTCATGAAACACTGAGTGTCCAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATCAAAGGCCCTATTCATTCATGAAACACTGAGTGTCCAGTGT  550

seq1  GGGTGCCCTTCAGCCAGGCATTGGAAATTAGTGTGTTGACCTCATGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCCTTCAGCCAGGCATTGGAAATTAGTGTGTTGACCTCATGTGCT  600

seq1  GTCATTCTCTTGGGGGGTGGGGGGCAACACACAAATCAACCAGATATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTCTTGGGGGGTGGGGGGCAACACACAAATCAACCAGATATAGG  650

seq1  TTTCTTCTCCTTCCAAAAATATGTTTCTTGTTTCCCACCTTCTGTTGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCCTTCCAAAAATATGTTTCTTGTTTCCCACCTTCTGTTGCAA  700

seq1  TGGAAAAGAAGCAAGGAATTCCAATGGAAATAATATCCTTAGGGACAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGAAGCAAGGAATTCCAATGGAAATAATATCCTTAGGGACAGTG  750

seq1  TTATGCAGAAGTGATTGCTAGGGAGGGAGCTGCCTTCAATGTGTTGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGAAGTGATTGCTAGGGAGGGAGCTGCCTTCAATGTGTTGCTTT  800

seq1  CAGGGCTGAGACCTTGAGGAGGGGGAGTGGGAGGAGGA  838
      ||||||||||||||||||||||||||||||  ||||||
seq2  CAGGGCTGAGACCTTGAGGAGGGGGAGTGG--GGAGGA  836


seq1: chr14_120897025_120897139
seq2: B6Ng01-304F13.g_73_187 (reverse)

seq1  CCTCCCTCCCTCCCTCCTATTTAAATATTGGTGGGAATTAAAACAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTCCTATTTAAATATTGGTGGGAATTAAAACAGAAGT  50

seq1  TAGGGCCTGTGAAGGGGAAGGATGCAGACGTCCCAGGTCTGAACACAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCTGTGAAGGGGAAGGATGCAGACGTCCCAGGTCTGAACACAGCA  100

seq1  AACTTTTAAACTCTT  115
      |||||||||||||||
seq2  AACTTTTAAACTCTT  115


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