BAC Information

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BAC

Clone NameB6Ng01-304P01
Chromosome14 (Build37)
Map Location 21,373,924 - 21,504,281
singlet/doubletdoublet
Overlap geneUsp54, Myoz1, Synpo2l, Sec24c
Upstream geneLOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb
Downstream geneFut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk, Myst4, EG435391
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304P01.bB6Ng01-304P01.g
ACCGA098358GA098359
length569738
definitionB6Ng01-304P01.b B6Ng01-304P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,503,707 - 21,504,281)(21,373,924 - 21,374,659)
sequence
caagtctctctagcccaacagaggcctcacaaggtggcctcagtgactca
gacaacagcagagcaagaaaagctcaggtgcaacaagcaggaggcaagca
ggactctccaaggaggccctaatgggaaaaaccttgaggaacagagggtt
ccctggaaggtcaaacctatacctaaggacttccgtgctgggagatgcct
cggctatccagctagactttccttcctaccgtggaagagagaagtggagt
tggggagggaagaacctgtcagtcctcctgggttcccccttagacaatag
gcttcctcaccatggtagttcctcaaaggaagagggaagagaacgaatgg
aatatgacaatgactaagtatgaagaggtaactgacatcaatgttacaga
caggatataaagcaggccctatgtgaaagaactactctacctgcgtctga
taaggaagggggtgtattccagcagctctacgggacaaacctcattggac
tttatatgcaccctgccttttatgctgtgattgggacctgccagtcaata
gtactggggtgggggtggg
gaattctctgtaatccatgatctgactcctgcttatagtccttcctatca
ttgtcaacaattctatgatttttcttcattagactttctagtcttgtcat
accaattattctcttttaatctagtcaacataagcttcagttccaggtgc
ctggcagactcattgttctttttcaatgaccctttccctggtatctcacc
tcttctaggatggtctcatagcagctagcatctcatcacattataagtgt
ttgtgtgtttatctgtccctgtagtagactaaatgctccatgaaaccaga
cactggatcactcattcagcacactgtttgaaaagcataatcaataaatc
aacaaataattgcatgatacactagaccaaagccaactctcttgggaaaa
taatatttcaattaaatgcattgaaaatatgtgagaacaaatgctatgcc
ggggaaattaccttttcccaaagaagatggaggaggaggaagaagaggag
gagaaggaaaagaggaggaagaaaaggaagagtagaaacaggaaaaagaa
gaaaaagaaaagaaggaagaagaaatgttcatttaggaacttactacact
cagtaaccctagagttctttttgggagggaaattggatggagatatatac
atcctattgaaccttttaatttgtaccatgtatttataaccattttaagg
gatttatgtatatagttaggtgatagaaggtttgccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21503707_21504281
seq2: B6Ng01-304P01.b_46_620 (reverse)

seq1  CCCACCCCCACCCCAGTACTATTGACTGGCAGGTCCCAATCACAGCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCACCCCAGTACTATTGACTGGCAGGTCCCAATCACAGCATAA  50

seq1  AAGGCAGGGTGCATATAAAGTCCAATGAGGTTTGTCCCGTAGAGCTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGGTGCATATAAAGTCCAATGAGGTTTGTCCCGTAGAGCTGCTG  100

seq1  GAATACACCCCCTTCCTTATCAGACGCAGGTAGAGTAGTTCTTTCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACACCCCCTTCCTTATCAGACGCAGGTAGAGTAGTTCTTTCACATA  150

seq1  GGGCCTGCTTTATATCCTGTCTGTAACATTGATGTCAGTTACCTCTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGCTTTATATCCTGTCTGTAACATTGATGTCAGTTACCTCTTCAT  200

seq1  ACTTAGTCATTGTCATATTCCATTCGTTCTCTTCCCTCTTCCTTTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCATTGTCATATTCCATTCGTTCTCTTCCCTCTTCCTTTGAGGA  250

seq1  ACTACCATGGTGAGGAAGCCTATTGTCTAAGGGGGAACCCAGGAGGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCATGGTGAGGAAGCCTATTGTCTAAGGGGGAACCCAGGAGGACTG  300

seq1  ACAGGTTCTTCCCTCCCCAACTCCACTTCTCTCTTCCACGGTAGGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTCTTCCCTCCCCAACTCCACTTCTCTCTTCCACGGTAGGAAGGA  350

seq1  AAGTCTAGCTGGATAGCCGAGGCATCTCCCAGCACGGAAGTCCTTAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGCTGGATAGCCGAGGCATCTCCCAGCACGGAAGTCCTTAGGTA  400

seq1  TAGGTTTGACCTTCCAGGGAACCCTCTGTTCCTCAAGGTTTTTCCCATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTGACCTTCCAGGGAACCCTCTGTTCCTCAAGGTTTTTCCCATTA  450

seq1  GGGCCTCCTTGGAGAGTCCTGCTTGCCTCCTGCTTGTTGCACCTGAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCTTGGAGAGTCCTGCTTGCCTCCTGCTTGTTGCACCTGAGCTT  500

seq1  TTCTTGCTCTGCTGTTGTCTGAGTCACTGAGGCCACCTTGTGAGGCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTCTGCTGTTGTCTGAGTCACTGAGGCCACCTTGTGAGGCCTCT  550

seq1  GTTGGGCTAGAGAGACTTGGAATTC  575
      |||||||||||||||||||||||||
seq2  GTTGGGCTAGAGAGACTTGGAATTC  575

seq1: chr14_21373924_21374659
seq2: B6Ng01-304P01.g_69_805

seq1  GAATTCTCTGTAATCCATGATCTGACTCCTGCTTATAGTCCTTCCTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAATCCATGATCTGACTCCTGCTTATAGTCCTTCCTATCA  50

seq1  TTGTCAACAATTCTATGATTTTTCTTCATTAGACTTTCTAGTCTTGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACAATTCTATGATTTTTCTTCATTAGACTTTCTAGTCTTGTCAT  100

seq1  ACCAATTATTCTCTTTTAATCTAGTCAACATAAGCTTCAGTTCCAGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTATTCTCTTTTAATCTAGTCAACATAAGCTTCAGTTCCAGGTGC  150

seq1  CTGGCAGACTCATTGTTCTTTTTCAATGACCCTTTCCCTGGTATCTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGACTCATTGTTCTTTTTCAATGACCCTTTCCCTGGTATCTCACC  200

seq1  TCTTCTAGGATGGTCTCATAGCAGCTAGCATCTCATCACATTATAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGGATGGTCTCATAGCAGCTAGCATCTCATCACATTATAAGTGT  250

seq1  TTGTGTGTTTATCTGTCCCTGTAGTAGACTAAATGCTCCATGAAACCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTTTATCTGTCCCTGTAGTAGACTAAATGCTCCATGAAACCAGA  300

seq1  CACTGGATCACTCATTCAGCACACTGTTTGAAAAGCATAATCAATAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATCACTCATTCAGCACACTGTTTGAAAAGCATAATCAATAAATC  350

seq1  AACAAATAATTGCATGATACACTAGACCAAAGCCAACTCTCTTGGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAATTGCATGATACACTAGACCAAAGCCAACTCTCTTGGGAAAA  400

seq1  TAATATTTCAATTAAATGCATTGAAAATATGTGAGAACAAATGCTATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTCAATTAAATGCATTGAAAATATGTGAGAACAAATGCTATGCC  450

seq1  GGGGAAATTACCTTTTCCCAAAGAAGATGGAGGAGGAGGAAGAAGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAATTACCTTTTCCCAAAGAAGATGGAGGAGGAGGAAGAAGAGGAG  500

seq1  GAGAAGGAAAAGAGGAGGAAGAAAAGGAAGAGTAGAAACAGGAAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAAGAGGAGGAAGAAAAGGAAGAGTAGAAACAGGAAAAAGAA  550

seq1  GAAAAAGAAAAGAAGGAAGAAGAAATGTTCATTTAGGAACTTACTACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAAAGAAGGAAGAAGAAATGTTCATTTAGGAACTTACTACACT  600

seq1  CAGTAACCCTAGAGTTCTTTTTGGGAGGGAAATTGGATGGAGATATATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACCCTAGAGTTCTTTTTGGGAGGGAAATTGGATGGAGATATATAC  650

seq1  ATCCTATTGAACCTTTTAA-TTGTACCATGTATTTATAACCATTTTAAGG  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCCTATTGAACCTTTTAATTTGTACCATGTATTTATAACCATTTTAAGG  700

seq1  GATTTATGTATATAGTTAGGTGATAGAAGGGTTGCCC  736
      |||||||||||||||||||||||||||||| ||||||
seq2  GATTTATGTATATAGTTAGGTGATAGAAGGTTTGCCC  737