BAC Information

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BAC

Clone NameB6Ng01-305G03
Chromosome14 (Build37)
Map Location 37,802,239 - 37,803,396
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665933, 4930474N05Rik, Gcap14
Downstream geneLOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G03.bB6Ng01-305G03.g
ACCGA098687GA098688
length1,1581,185
definitionB6Ng01-305G03.b B6Ng01-305G03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacactcccatatacacatacataaatgtagtgtgtatatacata
gtctacggttcagctttccaaaagaataaaactttgtcatttataacaac
actaatggactcagagtgcattatggtgaatgaaagaaaccagctatggc
aagggaaatattaatatggtctcacttactagcacaacctgcaataacac
ataagctgagagtagagctgtgattgcccagggcttcaagggagaggaaa
atggagaggtgtttgccaaggagtaaaaatttcaaattatgctaaataag
taaacccagaaatctgtgtagtatatgtgtagaaatctgtgtagtatatg
tgtagaaatctgtgtagtatatgtgtagcctatagctaccaatactgtat
cttatttttacgtttctaattggaaaggtgattctcattataaatattcc
ttatatacacacaaataaaaataaagaagcaagagaaaacttcagtaagt
actgtcaatggttatagccttgatgctggtttcacaggtatgtacatatt
tctaaactccctgatatgcacattaaatatgtagtttttttccatgcctg
tcatttatcaataaaacgatttaagagtgaattctattgagttgattgag
caagaatccccttagccttcatgcttcttcctgggacttttctatccacc
cacccttggccataagtattcagatggagctctctctctcatctacccct
ttcaaggaaggtctttcttacatctttaataggacttaggaataaaactg
ttgaaacacctgctggttgaagagctgctacagtgtaacacccagagaga
tgattctggtttcagtggttaaacagttacagaaagcaatcacagtggtc
tgtcagctagtttatatttaactgagaatgggctggggaaccctgccaga
ggagtccctggccatgctcaggccactgtgcccaagctcatcccttggca
tcccttcctctgagaagaggaagaagccttgttagaaaggaaacagagaa
ctaagaagaaggcatgaccttatttctgtagatttagagtgtatattagg
ttcaattcccataatccctattccaattcacagccagacttattatcatt
tacattta
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
atcagcatccttaatcatcagggaaatgcaaattaaaacagccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggttatagc
agatgctgtcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggatatagtactactggagaatcctgcaatacctctcctgggc
atatatccagaagatgttccaactgataagaaagacacatgctccactat
gttcacagcagccatatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggattcagaaaatatggtacatttacacaatg
gagtactactcagatattaaaaagaatgaatttatgaaattcctaggcaa
atggatagacctgaagggcatcatcctgagtgaggtaacccaatcacaaa
agaattcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatacaaagcacatgaaactcaagaagaacgaagacc
aaagtgtggacactttgccccttcttagaattgggaacaaaacacccatg
gaaggagtaacagagacaaagtttggagctgagacaaaaggatggatcat
ctagagaccgccatatccagggatccaccccataatcagccaccaaacgc
agacaccattgcatacacttgcaagaatttgctgaaaggaccctgatata
gctgtctcttgtgagactatgccgggccttagtaaacacagaagtggatg
ctcacagtcagctattggattggatcacagggccccaaattggaaggagc
tagagaaagttatccatgggagctaaaggttatctgcaccccttataggt
ggaaccaacattatgaacttaccagttacccccctggagcctcatgtcct
ctagttgcatcagtaccagaagatgggctaagcccggccatcatgggtaa
ggagagccattggttcgtgcaacctttttatatgcctcattaaaggggca
tggctcaggcccagataatgtgggatgcgccgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37802239_37803396
seq2: B6Ng01-305G03.b_47_1204

seq1  GAATTCACACTCCCATATACACATACATAAATGTAGTGTGTATATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTCCCATATACACATACATAAATGTAGTGTGTATATACATA  50

seq1  GTCTACGGTTCAGCTTTCCAAAAGAATAAAACTTTGTCATTTATAACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACGGTTCAGCTTTCCAAAAGAATAAAACTTTGTCATTTATAACAAC  100

seq1  ACTAATGGACTCAGAGTGCATTATGGTGAATGAAAGAAACCAGCTATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGACTCAGAGTGCATTATGGTGAATGAAAGAAACCAGCTATGGC  150

seq1  AAGGGAAATATTAATATGGTCTCACTTACTAGCACAACCTGCAATAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAATATTAATATGGTCTCACTTACTAGCACAACCTGCAATAACAC  200

seq1  ATAAGCTGAGAGTAGAGCTGTGATTGCCCAGGGCTTCAAGGGAGAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGAGAGTAGAGCTGTGATTGCCCAGGGCTTCAAGGGAGAGGAAA  250

seq1  ATGGAGAGGTGTTTGCCAAGGAGTAAAAATTTCAAATTATGCTAAATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGGTGTTTGCCAAGGAGTAAAAATTTCAAATTATGCTAAATAAG  300

seq1  TAAACCCAGAAATCTGTGTAGTATATGTGTAGAAATCTGTGTAGTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCAGAAATCTGTGTAGTATATGTGTAGAAATCTGTGTAGTATATG  350

seq1  TGTAGAAATCTGTGTAGTATATGTGTAGCCTATAGCTACCAATACTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAATCTGTGTAGTATATGTGTAGCCTATAGCTACCAATACTGTAT  400

seq1  CTTATTTTTACGTTTCTAATTGGAAAGGTGATTCTCATTATAAATATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTACGTTTCTAATTGGAAAGGTGATTCTCATTATAAATATTCC  450

seq1  TTATATACACACAAATAAAAATAAAGAAGCAAGAGAAAACTTCAGTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACACACAAATAAAAATAAAGAAGCAAGAGAAAACTTCAGTAAGT  500

seq1  ACTGTCAATGGTTATAGCCTTGATGCTGGTTTCACAGGTATGTACATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAATGGTTATAGCCTTGATGCTGGTTTCACAGGTATGTACATATT  550

seq1  TCTAAACTCCCTGATATGCACATTAAATATGTAGTTTTTTTCCATGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTCCCTGATATGCACATTAAATATGTAGTTTTTTTCCATGCCTG  600

seq1  TCATTTATCAATAAAACGATTTAAGAGTGAATTCTATTGAGTTGATTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATCAATAAAACGATTTAAGAGTGAATTCTATTGAGTTGATTGAG  650

seq1  CAAGAATCCCCTTAGCCTTCATGCTTCTTCCTGGGACTTTTCTATCCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCCCCTTAGCCTTCATGCTTCTTCCTGGGACTTTTCTATCCACC  700

seq1  CACCCTTGGCCATAAGTATTCAGATGGAGCTCTCTCTCTCATCTACCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTGGCCATAAGTATTCAGATGGAGCTCTCTCTCTCATCTACCCCT  750

seq1  TTCAAGGAAGGTCTTTCTTACATCTTTAATAGGACTTAGGAATAAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGAAGGTCTTTCTTACATCTTTAATAGGACTTAGGAATAAAACTG  800

seq1  TTGAAACACCTGCTGGTTGAAGAGCTGCTACAGTGTAACACCCAGAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACACCTGCTGGTTGAAGAGCTGCTACAGTGTAACACCCAGAGAGA  850

seq1  TGATTCTGGTTTCAGTGGTTAAACAGTTACAGAAAGCAATCACAGTGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGGTTTCAGTGGTTAAACAGTTACAGAAAGCAATCACAGTGGTC  900

seq1  TGTCAGCTAGTTTATATTTAACTGAGAATGGGCTGGGGAACCCTGCCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTAGTTTATATTTAACTGAGAATGGGCTGGGGAACCCTGCCAGA  950

seq1  GGAGTCCCTGGCCATGCTCAGGCCACTGTGCCCAAGCTCATCCCTTGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCTGGCCATGCTCAGGCCACTGTGCCCAAGCTCATCCCTTGGCA  1000

seq1  T-CCTTCCTCTGAGGAAGA-GAAG-AGCCT--GTAGAAAGGAAACAGAGA  1045
      | ||||||||||| ||||| |||| |||||   |||||||||||||||||
seq2  TCCCTTCCTCTGA-GAAGAGGAAGAAGCCTTGTTAGAAAGGAAACAGAGA  1049

seq1  ACCAAAGAAGGAAGGGCATGA-CTTATTTCCTGTAGATTTAGA-TGTATA  1093
      | | ||||||  | ||||||| ||||||| ||||||||||||| ||||||
seq2  A-CTAAGAAG--AAGGCATGACCTTATTT-CTGTAGATTTAGAGTGTATA  1095

seq1  TTAGGTTCAAATTCACATTATTCATAATTCAAATCACAGCAAGACTTATT  1143
      |||||||| ||||| ||| || | || | ||| ||||||| |||||||||
seq2  TTAGGTTC-AATTCCCATAATCCCTATTCCAATTCACAGCCAGACTTATT  1144

seq1  ATCATTATACATTTA  1158
      |||||| ||||||||
seq2  ATCATT-TACATTTA  1158