BAC Information

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BAC

Clone NameB6Ng01-305N07
Chromosome14 (Build37)
Map Location 20,605,633 - 20,606,796
singlet/doubletsinglet
Overlap geneNid2
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855
Downstream gene2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305N07.b
ACCGA099021
length1,162
definitionB6Ng01-305N07.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtggtcagctggctactgagagggactgcctaggaaggcta
agcattggtatttagaaactaaagtagtttgtagatgactattccctttg
gaagatattctaaaatgaggaaataattgtggggagagcaaggttcttgt
cttgcatggcctggtgtgaggctgtttttagttaaaatctggccagagac
tggtttcagtgactctgtctacatgcccatgttaactgagtactgctacc
cccaatgctgggttctcatcccttggcaaacagatccagaagaaggcatt
cccaggatggatggcaggcttttttttttcccttttggtctggcagagat
tcccttatgttagctaacattggggtgaactggggatagacctatagcca
accccacattcaggccttgattggggagctgaaaatgaatgttctgctgt
ttactaggaggttatctcagctgaggcatttcagtatacaacagactgtt
gaagcaaaacagaagaggctaacttgggcagcaggacagtgaaagtgaga
cagtgagggtcttgagggactcaggaggaagccagccctctgaagtaggc
ttcagtaactagcactttggacgggtctcagctgtagaaggtggctgagg
agtcatgggtgagacagaagtggcagagaatcctggcactaaggacaagc
agaagtcctgccaaggtgtatgtacagatgctaggattctggcttctaac
agtgagagaacgattgtacaggtggggtgtcctgggatgtgtatgaaccc
tgccctccaaggcagggatcagacacagacgtaagaggcagaaacccgcc
cccacccccattattatatcgtgcaaggagtagtctgatagcaggagtga
cttagtacagagatttgacgtacacggagctccttgaagctctctgtgtc
caagattacagttccacagactgaaggcaaaaacagaaacctcagatagg
acaaagctgccgcactgaggagcaggaggacccagtctctcaggaccaca
gaacaggccatgggaacatcagcttggaaatacatatggttccattttag
gagcatccaggaagatacaacaatggccattgggaatctgcactgaagag
tcagaagggggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20605633_20606796
seq2: B6Ng01-305N07.b_42_1203

seq1  GAATTCACTGTGGTCAGCTGGCTACTGAGAGGGACTGCCTAGGAAGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGGTCAGCTGGCTACTGAGAGGGACTGCCTAGGAAGGCTA  50

seq1  AGCATTGGTATTTAGAAACTAAAGTAGTTTGTAGATGACTATTCCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGTATTTAGAAACTAAAGTAGTTTGTAGATGACTATTCCCTTTG  100

seq1  GAAGATATTCTAAAATGAGGAAATAATTGTGGGGAGAGCAAGGTTCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATTCTAAAATGAGGAAATAATTGTGGGGAGAGCAAGGTTCTTGT  150

seq1  CTTGCATGGCCTGGTGTGAGGCTGTTTTTAGTTAAAATCTGGCCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATGGCCTGGTGTGAGGCTGTTTTTAGTTAAAATCTGGCCAGAGAC  200

seq1  TGGTTTCAGTGACTCTGTCTACATGCCCATGTTAACTGAGTACTGCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCAGTGACTCTGTCTACATGCCCATGTTAACTGAGTACTGCTACC  250

seq1  CCCAATGCTGGGTTCTCATCCCTTGGCAAACAGATCCAGAAGAAGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGCTGGGTTCTCATCCCTTGGCAAACAGATCCAGAAGAAGGCATT  300

seq1  CCCAGGATGGATGGCAGGCTTTTTTTTTTCCCTTTTGGTCTGGCAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATGGATGGCAGGCTTTTTTTTTTCCCTTTTGGTCTGGCAGAGAT  350

seq1  TCCCTTATGTTAGCTAACATTGGGGTGAACTGGGGATAGACCTATAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATGTTAGCTAACATTGGGGTGAACTGGGGATAGACCTATAGCCA  400

seq1  ACCCCACATTCAGGCCTTGATTGGGGAGCTGAAAATGAATGTTCTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACATTCAGGCCTTGATTGGGGAGCTGAAAATGAATGTTCTGCTGT  450

seq1  TTACTAGGAGGTTATCTCAGCTGAGGCATTTCAGTATACAACAGACTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGGAGGTTATCTCAGCTGAGGCATTTCAGTATACAACAGACTGTT  500

seq1  GAAGCAAAACAGAAGAGGCTAACTTGGGCAGCAGGACAGTGAAAGTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAAACAGAAGAGGCTAACTTGGGCAGCAGGACAGTGAAAGTGAGA  550

seq1  CAGTGAGGGTCTTGAGGGACTCAGGAGGAAGCCAGCCCTCTGAAGTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGGTCTTGAGGGACTCAGGAGGAAGCCAGCCCTCTGAAGTAGGC  600

seq1  TTCAGTAACTAGCACTTTGGACGGGTCTCAGCTGTAGAAGGTGGCTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAACTAGCACTTTGGACGGGTCTCAGCTGTAGAAGGTGGCTGAGG  650

seq1  AGTCATGGGTGAGACAGAAGTGGCAGAGAATCCTGGCACTAAGGACAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGGTGAGACAGAAGTGGCAGAGAATCCTGGCACTAAGGACAAGC  700

seq1  AGAAGTCCTGCCAAGGTGTATGTACAGATGCTAGGATTCTGGCTTCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCCTGCCAAGGTGTATGTACAGATGCTAGGATTCTGGCTTCTAAC  750

seq1  AGTGAGAGAACGATTGTACAGGTGGGGTGTCCTGGGATGTGTATGAA-CC  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTGAGAGAACGATTGTACAGGTGGGGTGTCCTGGGATGTGTATGAACCC  800

seq1  TGCCCTCCAAGGCAGGGATCAGACACAGACGTAAGAGGCAGAAACCCGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCAAGGCAGGGATCAGACACAGACGTAAGAGGCAGAAACCCGCC  850

seq1  CCCACCCCCATTATTATATCGTGCAAGGAGTAGTCTGATAGCAGGAGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCATTATTATATCGTGCAAGGAGTAGTCTGATAGCAGGAGTGA  900

seq1  CTTAGTACAGAGA-TTGACGTACACGGAGCTCCTTGAAGCTCTCTGTGTC  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTAGTACAGAGATTTGACGTACACGGAGCTCCTTGAAGCTCTCTGTGTC  950

seq1  CAAGATTACAGTTCCACAGACTG-AGGC-AAAACAGAAACCTCAGATAAG  996
      ||||||||||||||||||||||| |||| |||||||||||||||||| ||
seq2  CAAGATTACAGTTCCACAGACTGAAGGCAAAAACAGAAACCTCAGAT-AG  999

seq1  GACAAAGCTGCCGCACTGAGGAGGCAGGAGGACACAGTCTCTCAGGACCA  1046
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  GACAAAGCTGCCGCACTGAGGA-GCAGGAGGACCCAGTCTCTCAGGACCA  1048

seq1  CAAGACAAGCCAATGGGAACATCAGCCTTGGAAATACATTATGTTCCATT  1096
      ||  ||| ||| ||||||||||||| |||||||||||||   ||||||||
seq2  CAGAACAGGCC-ATGGGAACATCAG-CTTGGAAATACATATGGTTCCATT  1096

seq1  TTAAAGAGCAAATCCAGG-AGATACAAACAATGCCCATT-GGATTCTGCA  1144
      || | ||||  ||||||| |||||| ||||||| ||||| ||| ||||||
seq2  TT-AGGAGC--ATCCAGGAAGATAC-AACAATGGCCATTGGGAATCTGCA  1142

seq1  CTGAAGAGTCAGAAGGGGGT  1164
      ||||||||||||||||||||
seq2  CTGAAGAGTCAGAAGGGGGT  1162