BAC Information

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BAC

Clone NameB6Ng01-306E18
Chromosome14 (Build37)
Map Location 96,110,986 - 96,111,562
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
Downstream gene4921530L21Rik, Klhl1, LOC100043366
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306E18.bB6Ng01-306E18.g
ACCGA099372GA099373
length1,092950
definitionB6Ng01-306E18.b B6Ng01-306E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggttttggattttt
ttcaaatgctttctcctcatctaatgggatgatcatgtggtttttgtcat
tgagtttgtttatatagtggattatgttgatggattttcgtatattaaac
catccgtgcatccctggaatgaaacctacttggtcaggatggatgattgt
tttgatgtgttcttggatttgattactgagaaatttattgagtattttca
ctttgatattcattagggaaattggtctgaagttctctatctttgttggg
tctttctgtggtttaggtatcagagtaattgtggcttcatagaatgaatt
gggtagggtaccttctgcttctaaggactggtaactcttaagcagtgttc
tcctatatttctttaagttagttattaaaatccttcttgatgttctctac
catgatcatgatatatgcttttaaatccgggtctagcttttcaggtgtgt
tgtggtgcccaggactgggcgaagtgggagtgctgcattctgatgatggt
gagtgatcttcatttctgttagtaaaattcttacatttgcctttcaccat
ctggtaatctctggatttagttgttatagtttgtctctggttagagagtg
ttcctctcatgattctgttagcctctatcagcagacctgggaaactagat
ctctcctctgagtttcagtggtcagaacactctctgcaggcaagctctcc
ttttacagggaaaggtgcacagatatcttgcgttcggacctgcctcctga
cagaagatgaaggcttgaaacaggacctgtcccagaagctgtgtctcttt
tgcctgtcacaaaagttgttagcttctgtatccacactctcacctgtgca
gactaatttcagagggatccgggaaccaagatggctcccccaagtgctca
aggtaagctcttccttgggcatatgcagacatttctttctcttgcaagga
cagttgcctgggatgtctggagcctgaaacaaggtctgtcctataagcct
gcctctcgaagacctgttggagtctctgcagaactccctgtg

ggattcaattccattaatcaagcaccaccataaatttgaaaatatttgta
taccataaacctaggccaatcattatttctataggtttgttcctatgaca
agaagcagctttaaaaagctaactatgcttttatagttttaagaggtaga
gattagatttagatggcaaccactaaacatttcagaaattacccattgct
aagattaaattttctttcttaagcttagctaaaatgaatagttttctcac
ttctcatcaacagtcttaacaaaattattgtgtctaaattctcttgatgt
aacaatgcttattaatatgggaatatggggttcattacctagatatcagg
gataaaaaagacaaaactttcattcatttttgtctgtgatgttgcccatt
cactacatagtgatgtggcattattttcagcacctgtaattgaattttac
acacactcagaatcaccttaaaagaggaaatctaagtgaagaatttcctt
aatctgattggcaatgtctgtgaggtaatttctcaactactaattgatct
tataggtccatcccactgcagacattggtacttttagggagaggtctgaa
ttatataggacagtgtgtgaagtttgaataggaatgtcccctacggattc
atgtaattgaatgtttggcccatagaaaatccactgtaaggaatgatggc
cttgttgaagtatatgtggctatgttggagaaagtgtaactgtggaggta
ggatttgaagatgccaacagtacacccagtgaagtacacagtgtatcaca
cagtgataggctgctgcttgtagttcaagatgtagagctgtcaaacttcc
ccagctccatgtctgcctggaagctgctatgctttccctcaatgatgata
atggaacaaatctctgaactaaaagctagccacaatgaaatgctgtctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96110986_96111562
seq2: B6Ng01-306E18.g_65_641 (reverse)

seq1  CAATGTCTGCAGTGGGATGGACCTATAAGATCAATTAGTAGTTGAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGCAGTGGGATGGACCTATAAGATCAATTAGTAGTTGAGAAAT  50

seq1  TACCTCACAGACATTGCCAATCAGATTAAGGAAATTCTTCACTTAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACAGACATTGCCAATCAGATTAAGGAAATTCTTCACTTAGATTT  100

seq1  CCTCTTTTAAGGTGATTCTGAGTGTGTGTAAAATTCAATTACAGGTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTAAGGTGATTCTGAGTGTGTGTAAAATTCAATTACAGGTGCTG  150

seq1  AAAATAATGCCACATCACTATGTAGTGAATGGGCAACATCACAGACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGCCACATCACTATGTAGTGAATGGGCAACATCACAGACAAAA  200

seq1  ATGAATGAAAGTTTTGTCTTTTTTATCCCTGATATCTAGGTAATGAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAAAGTTTTGTCTTTTTTATCCCTGATATCTAGGTAATGAACCC  250

seq1  CATATTCCCATATTAATAAGCATTGTTACATCAAGAGAATTTAGACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCCCATATTAATAAGCATTGTTACATCAAGAGAATTTAGACACAA  300

seq1  TAATTTTGTTAAGACTGTTGATGAGAAGTGAGAAAACTATTCATTTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGTTAAGACTGTTGATGAGAAGTGAGAAAACTATTCATTTTAGC  350

seq1  TAAGCTTAAGAAAGAAAATTTAATCTTAGCAATGGGTAATTTCTGAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTAAGAAAGAAAATTTAATCTTAGCAATGGGTAATTTCTGAAATG  400

seq1  TTTAGTGGTTGCCATCTAAATCTAATCTCTACCTCTTAAAACTATAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGGTTGCCATCTAAATCTAATCTCTACCTCTTAAAACTATAAAAG  450

seq1  CATAGTTAGCTTTTTAAAGCTGCTTCTTGTCATAGGAACAAACCTATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAGCTTTTTAAAGCTGCTTCTTGTCATAGGAACAAACCTATAGA  500

seq1  AATAATGATTGGCCTAGGTTTATGGTATACAAATATTTTCAAATTTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGATTGGCCTAGGTTTATGGTATACAAATATTTTCAAATTTATGG  550

seq1  TGGTGCTTGATTAATGGAATTGAATCC  577
      |||||||||||||||||||||||||||
seq2  TGGTGCTTGATTAATGGAATTGAATCC  577


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