BAC Information

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BAC

Clone NameB6Ng01-306G07
Chromosome14 (Build37)
Map Location 19,795,851 - 19,796,823
singlet/doubletsinglet
Overlap genenone
Upstream geneThrb, LOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2
Downstream geneLOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306G07.bB6Ng01-306G07.g
ACCGA099444GA099445
length1,0071,161
definitionB6Ng01-306G07.b B6Ng01-306G07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaaaagaccctcactcgcaaagaccatagaaactgccattgt
tacaaaccgcatgaggatttttattgatccaacatgttggggactcccct
ctcagcaagcagaccagaagagagacccagaacaaagaaagatcacactt
tttatacctttgcaagaggcagatttgagcaacagggttctcattggtgt
agccctttcaggcattggttggtttgtatagtgactaagtaaccctttgg
cctagttccacactttgcctgccctcatagtagattattatgatttggtc
agcttttagctattaacatcacagggaattctagcaaggtcaggggatct
gcagtctttctcagaatttagtgtggggcagggtagggggatttctctgg
gagctgctatcttgttacagttttttctctgagaacagctaatattattt
tggcagttgcaagcttagtcattttgaccgctaaaactatgtttttacat
ttgtttagtcagccagttgtctggctctgcacttggcctgctaggacagt
ttggaaagtcctcttcgaagggggaaggtaccgggtggtcttgaactcat
tttgaatattacaaagccactgctggaagactacatccccacctggggct
tcacctcagtgtgagcacctaccaaactagaatgacaattctacactaga
ataaacctgaggactctaggcaaagagttttctaattcagcctcctgctg
ttaaggcctggcctattgccctttattgacaacagagtacaggttgtcca
ccagcaggtgaaaggtgcttttccacctgctttgtctataccaactaggc
caaacctgtgtttacataagtctggagaaggaaagaatccagaccctgga
acaagattagagcgatcggtcagccttagaactgtgctgtttatttatgt
gtttatttgggcaagttctgggttcttgtttctaggtgctatatcaaagc
cccagga
gaattcaacaaaaccatccagcatctaaaaatggaagtagaaacaataaa
gaaatcacaaagggagacaacactagagacagaaaacctaggaaagagat
caggagtcaaagatgcaagcatcatcaacagaatacaagagacagaagag
agaatcacaggtgcagaagataccatagaaaacattgacacaataatcaa
agaaatgtaaaatgcaaaaagctcctaacccaaaacatccaggaaatcta
gaacacagagacaagaccaaacctaaggaaaatatgtgtagatgagagtg
aagattcccaaattaaagggccagtaaatatcttcaacagaattatagaa
gaaaatttccctaacctaaagaaagagaggcacatgaacatacaagaagc
ctatagaactccaaatagattgggccagaaaagaaattcctcctgtcaca
taataatcaaagcacaaaatgcacaaaacaaagaaagaatattaaaagca
gtaagggaaaaaggtcaagtaacatataaaggcagatctattagaattac
accagacttctcaccagagactatgaaagctagaagatccaggcagatct
catacagaccctaagagaacacaaatgccagccaagactactatacctag
caaaactctcaattaccatagatggagaaacgaagatattccatgacaaa
accaaatttacacaatacctttccacaaatctagccctacaaaggataat
agatggaaaatgccaatacaaggagggaaaccacatcctagaaaaagcaa
aaaagtaatcttctttcaacaaacccaaaagaaaataaccacacaaacat
aaaaataacatcaaaaataacaggaagccacaatcacttttccttaatat
ctcttaacatcaatggactcaataccccaataaaaagtcatagtctaaca
gactgaatatgtaacagactcaacattttgctgtatacaggaaatgcact
ttcagtgtcaaagaaagacactacctcagagtaaaggtgaaaacatttct
aaagccaaatagtccagaaaacagcgggtatagcatcctatatccaaata
aactggaatcactaagctatcgaaaggatagattgaacacctttcatact
caatccaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_19795851_19796823
seq2: B6Ng01-306G07.b_45_1014 (reverse)

seq1  CAGAACTTTGCCCCAATTAAACACATAAATAAACAGCACAGTTCTAAGGC  50
      ||||||||   ||||| |||||||||||||||||||||||||||||||||
seq2  CAGAACTT--GCCCAAATAAACACATAAATAAACAGCACAGTTCTAAGGC  48

seq1  TGACCGATCGCTCTAATCTTGTTCCAGGGTCTGGATTCTTTCCTTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGATCGCTCTAATCTTGTTCCAGGGTCTGGATTCTTTCCTTCTCCA  98

seq1  GACTTATGTAAACACAGGTTTGGCCTAGTTGGTATAGACAAAGCAGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGTAAACACAGGTTTGGCCTAGTTGGTATAGACAAAGCAGGTGG  148

seq1  AAAAGCACCTTTCACCCTGCTGGTGGACAACCTGTACTCTGTTGTCAATA  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAAGCACCTTTCA-CCTGCTGGTGGACAACCTGTACTCTGTTGTCAATA  197

seq1  AAGGGCAATAGGCCAGGCCTTAACAGCAGGAGGCTGAATTAGAAAACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAATAGGCCAGGCCTTAACAGCAGGAGGCTGAATTAGAAAACTCT  247

seq1  TTGCCTAGAGTCCTCAGGTTTATTCTAGTGTAGAATTGTCATTCTAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGAGTCCTCAGGTTTATTCTAGTGTAGAATTGTCATTCTAGTTT  297

seq1  GGTAGGTGCTCACACTGAGGTGAAGCCCCAGGTGGGGATGTAGTCTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTGCTCACACTGAGGTGAAGCCCCAGGTGGGGATGTAGTCTTCCA  347

seq1  GCAGTGGCTTTGTAATATTCAAAATGAGTTCAAGACCACCCGGTACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGCTTTGTAATATTCAAAATGAGTTCAAGACCACCCGGTACCTTC  397

seq1  CCCCTTCGAAGAGGACTTTCCAAACTGTCCTAGCAGGCCAAGTGCAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCGAAGAGGACTTTCCAAACTGTCCTAGCAGGCCAAGTGCAGAGC  447

seq1  CAGACAACTGGCTGACTAAACAAATGTAAAAACATAGTTTTAGCGGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAACTGGCTGACTAAACAAATGTAAAAACATAGTTTTAGCGGTCAA  497

seq1  AATGACTAAGCTTGCAACTGCCAAAATAATATTAGCTGTTCTCAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTAAGCTTGCAACTGCCAAAATAATATTAGCTGTTCTCAGAGAAA  547

seq1  AAACTGTAACAAGATAGCAGCTCCCAGAGAAATCCCCCTACCCTGCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAACAAGATAGCAGCTCCCAGAGAAATCCCCCTACCCTGCCCCA  597

seq1  CACTAAATTCTGAGAAAGACTGCAGATCCCCTGACCTTGCTAGAATTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAATTCTGAGAAAGACTGCAGATCCCCTGACCTTGCTAGAATTCCC  647

seq1  TGTGATGTTAATAGCTAAAAGCTGACCAAATCATAATAATCTACTATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTAATAGCTAAAAGCTGACCAAATCATAATAATCTACTATGAG  697

seq1  GGCAGGCAAAGTGTGGAACTAGGCCAAAGGGTTACTTAGTCACTATACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAAAGTGTGGAACTAGGCCAAAGGGTTACTTAGTCACTATACAA  747

seq1  ACCAACCAATGCCTGAAAGGGCTACACCAATGAGAACCCTGTTGCTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAATGCCTGAAAGGGCTACACCAATGAGAACCCTGTTGCTCAAA  797

seq1  TCTGCCTCTTGCAAAGGTATAAAAAGTGTGATCTTTCTTTGTTCTGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTTGCAAAGGTATAAAAAGTGTGATCTTTCTTTGTTCTGGGTC  847

seq1  TCTCTTCTGGTCTGCTTGCTGAGAGGGGAGTCCCCAACATGTTGGATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGGTCTGCTTGCTGAGAGGGGAGTCCCCAACATGTTGGATCAA  897

seq1  TAAAAATCCTCATGCGGTTTGTAACAATGGCAGTTTCTATGGTCTTTGCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCCTCATGCGGTTTGTAACAATGGCAGTTTCTATGGTCTTTGCG  947

seq1  AGTGAGGGTCTTTTGATGAATTC  973
      |||||||||||||||||||||||
seq2  AGTGAGGGTCTTTTGATGAATTC  970