BAC Information

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BAC

Clone NameB6Ng01-306G18
Chromosome14 (Build37)
Map Location 66,220,287 - 66,221,283
singlet/doubletsinglet
Overlap genenone
Upstream geneKif13b, Hmbox1, LOC100043657, D14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3
Downstream geneGm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306G18.bB6Ng01-306G18.g
ACCGA099464GA099465
length9021,002
definitionB6Ng01-306G18.b B6Ng01-306G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctccctctccaccatacctgcctggatgctgccatgttcc
cgccttggtaataatggactgaacctctgaacctgtaagccagccccaat
taaatgttgtcctttataagagttgccttggtcaaagtgtctgttcacag
cagaaaaactctaagtcagtagctcagcagtgatcagcacatatgtgaag
ctcatgtggttgatacaacttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttctttttttttttttttttttttttttttttg
agacagggtttctctgtgtccccctggttgtcctggaactcactttgtag
accaggctggccttgaactcagaaatctgcctgcccctgtcttccaagtg
ctgggattaaaggcgtgcgccactgcacccggctctgatacaacttctaa
agaaagacctaagactagagcatacactactgactccatttggactcact
caatgacccgtccagcaggtcaagttatttgagggtctctaggggacctt
ctcctaagaaccaaatgggggatagagagagacgagaagcttgtgcaatg
aacgacacatggaagcagtctgagtagcatcaaggtcccaatgtattagc
aaggctcaaggtttaaatgcacaagcaaagaggaagtacttctcagcagg
aggaatggggcaggggaaatgcacctcagcaggagggatggggcatcgga
aaaagaggaagtacttctcagcaggagggatgggtcagcagaaatttttt
cttttggtgactacacagggaagcaggaacttggcagtatcaggtacatc
ttgaggtcaggacatctggcactgacttaggctggaacaaactgtggttg
tt
gaattcctataactccaaggaattcccatttatttccatgtgtcagtcag
cggtcacaagttccttgtgtactggaactgtgatggtttttggtgagagg
ctcatgatttggtgtctgcttttgatgcagctaaactcagtctaaccctg
cacagatctgtgccaacagaccattctggacatcatgtactgttgttgta
gtaaatgaagtcagttgaacttacccctgaccctgaatgaagcccaaacc
actgcttgtgttccagactccagtgagcatgcttgcgtcttccctaaact
gtgtgtactttttaaaatgtgctttaatctacatcgctctgaagccaaag
agccttagccccaagacgactctcagagcatcttcaaatccaagagtctg
agaagtgtttgtgtagcccaacgtcagtaaggcaatagtgcttttgctca
ctggtcaattgttctttgggttttgtttggactcattattccttctgccc
ctggaatttgaattctagaatacagattggtcctggcaaactacagattt
ttgtccaacagtgggaccatacattttctttggtctccagtgtccatagt
ggggacatgatggctaatgttctctgtgatgatggctcaccaagtcacta
ttctatagaaaatagcaaagttctctgtgacttcctcattttatggctga
agtcactgacaggctttacttagagtggccatatgtggtttagtttttgt
aatggtgatttttttaaattatttatttatttattatatgtaagtacact
gtagtgtgtcttcagacacttccagaagatagcatcagattttcgttatg
gatgggttgtgagccaccatgtggctgctgggatttgaagtcaggaccct
tcggaagaacagttcggcgcttcttaaccactgagccagctcacagcccc
agtaatggtgattttaaaatatttatttattgaactagcctgatttttgt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66220287_66221283
seq2: B6Ng01-306G18.g_65_1066

seq1  GAATTCCTATAACTCCAAGGAATTCCCATTTATTTCCATGTGTCAGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAACTCCAAGGAATTCCCATTTATTTCCATGTGTCAGTCAG  50

seq1  CGGTCACAAGTTCCTTGTGTACTGGAACTGTGATGGTTTTTGGTGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCACAAGTTCCTTGTGTACTGGAACTGTGATGGTTTTTGGTGAGAGG  100

seq1  CTCATGATTTGGTGTCTGCTTTTGATGCAGCTAAACTCAGTCTAACCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATTTGGTGTCTGCTTTTGATGCAGCTAAACTCAGTCTAACCCTG  150

seq1  CACAGATCTGTGCCAACAGACCATTCTGGACATCATGTACTGTTGTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCTGTGCCAACAGACCATTCTGGACATCATGTACTGTTGTTGTA  200

seq1  GTAAATGAAGTCAGTTGAACTTACCCCTGACCCTGAATGAAGCCCAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAAGTCAGTTGAACTTACCCCTGACCCTGAATGAAGCCCAAACC  250

seq1  ACTGCTTGTGTTCCAGACTCCAGTGAGCATGCTTGCGTCTTCCCTAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTGTGTTCCAGACTCCAGTGAGCATGCTTGCGTCTTCCCTAAACT  300

seq1  GTGTGTACTTTTTAAAATGTGCTTTAATCTACATCGCTCTGAAGCCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACTTTTTAAAATGTGCTTTAATCTACATCGCTCTGAAGCCAAAG  350

seq1  AGCCTTAGCCCCAAGACGACTCTCAGAGCATCTTCAAATCCAAGAGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAGCCCCAAGACGACTCTCAGAGCATCTTCAAATCCAAGAGTCTG  400

seq1  AGAAGTGTTTGTGTAGCCCAACGTCAGTAAGGCAATAGTGCTTTTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTTTGTGTAGCCCAACGTCAGTAAGGCAATAGTGCTTTTGCTCA  450

seq1  CTGGTCAATTGTTCTTTGGGTTTTGTTTGGACTCATTATTCCTTCTGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAATTGTTCTTTGGGTTTTGTTTGGACTCATTATTCCTTCTGCCC  500

seq1  CTGGAATTTGAATTCTAGAATACAGATTGGTCCTGGCAAACTACAGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTTGAATTCTAGAATACAGATTGGTCCTGGCAAACTACAGATTT  550

seq1  TTGTCCAACAGTGGGACCATACATTTTCTTTGGTCTCCAGTGTCCATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAACAGTGGGACCATACATTTTCTTTGGTCTCCAGTGTCCATAGT  600

seq1  GGGGACATGATGGCTAATGTTCTCTGTGATGATGGCTCACCAAGTCACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACATGATGGCTAATGTTCTCTGTGATGATGGCTCACCAAGTCACTA  650

seq1  TTCTATAGAAAATAGCAAAGTTCTCTGTGACTTCCTCATTTTATGGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGAAAATAGCAAAGTTCTCTGTGACTTCCTCATTTTATGGCTGA  700

seq1  AGTCACTGACAGGCTTTACTTAGAGTGGCCATATGTGGTTTAGTTTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGACAGGCTTTACTTAGAGTGGCCATATGTGGTTTAGTTTTTGT  750

seq1  AATGGTGA-TTTTTTAAATTATTTATTTATTTATTATATGTAAGTACACT  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGATTTTTTTAAATTATTTATTTATTTATTATATGTAAGTACACT  800

seq1  GTAGTGTGTCTTCAGACAC-TCCAGAAGATAGCATCAGA-TTTCGTTATG  847
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  GTAGTGTGTCTTCAGACACTTCCAGAAGATAGCATCAGATTTTCGTTATG  850

seq1  GAT-GGTTGTGAGCCACCATGTGGCTGCTGGGATTTGAAGTCAGGA-CCT  895
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  GATGGGTTGTGAGCCACCATGTGGCTGCTGGGATTTGAAGTCAGGACCCT  900

seq1  TCGGAAGAACAG-TCGGCGC-TCTTAACCACTGAGCCAGCTCACCAGCCC  943
      |||||||||||| ||||||| |||||||||||||||||||||| ||||||
seq2  TCGGAAGAACAGTTCGGCGCTTCTTAACCACTGAGCCAGCTCA-CAGCCC  949

seq1  CAGTAATGGTGATTTTAAAATTATTTATTTATTGTACTAG-CTGATTTTG  992
      |||||||||||||||||||| ||||||||||||| ||||| |||||||| 
seq2  CAGTAATGGTGATTTTAAAA-TATTTATTTATTGAACTAGCCTGATTTT-  997

seq1  TGTGT  997
      |||||
seq2  TGTGT  1002