BAC Information

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BAC

Clone NameB6Ng01-306J07
Chromosome14 (Build37)
Map Location 16,040,630 - 16,252,326
singlet/doubletdoublet
Overlap geneLrrc3b
Upstream geneLOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306J07.bB6Ng01-306J07.g
ACCGA099573GA099574
length530975
definitionB6Ng01-306J07.b B6Ng01-306J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,251,791 - 16,252,326)(16,040,630 - 16,041,549)
sequence
catttctgtcacagttttccttagaagcatttccttgagacttttcaatc
ttagctggattaggaaatgaatgagaatgccatcatatcaggggaatgta
gacagcagctgtgtgtcatagaagttgtggtcttgtttgttgacattcaa
tccccttaggcctgaaaacctagcacctttttgtgttcacacatcttatt
tttttaatccatatttaattgcttcacattgttctgatttctgctgtgcc
cttacccagaaattttattttttttaaacaggtttattatgtcatgcttt
attttatattagatatttttttcatttacattttaaatggtttcctgaaa
gccccctataccttctccccgccctgctccccaacccacccactcctgct
tcctggccctggcattcccttgtactggggcatatgatcttcgcaaaggc
ctctcctcctattgatggctgactaggccatcctctgctacatatgcaac
tagagacacagctctggggtgggggtgggg

gaattcctccccaagtcatgaaatcattgatatacacaaattgagttttg
tatattttttctgtaagtttggctgtctttcataggcagacagaaagcct
acctatatagaaaaattaaggttgtaaggctgataaattaaatcctagat
gtgaaatggctaataaaagataaatatgagagaaaggaattctgttccag
tcagaggtaacttttctcttttctcttctctcttttctcttttctccttt
ctttctcttttctcttttctttctcttttctctcatttctcttttcttct
cttttctcttttctctcctctcctctcctctcctctccttttcttttctc
ttctcttcttttcttttctgtttgttgagttttatcttgatgacagattg
actagtgttcagctctgattatatgtccaagcaagttcagtcaatcaaga
gggtctcaaggaagggagtgaggattaaaaacagaaaagacaattagaca
acattatagcatgactccagtcattgctgaagcaggcttttttttccagt
ctgctttaataccattctaggtacatgtaaagaatagggtcagttttagg
taaaaaacaaagtactccaggaacaagcaaagcataagcaaaggtctcat
gattattgtaattagttagtgattaagatacaaagaacacattcctcagc
tgtattcatcttgagcccactgtcaaattcttgtctgagcctactctctt
ttcctaacccaatgtaaatattcttgttcataagattgaagcagtaccaa
gagctctccacatctccctccctccttttttaaatttcataaacaagact
gcatctatcttaggttgttctaacaatattaaacctcctttacctgaata
tgcattattccaaagcaatgtatttctgtcttagattagtagggctctgt
gcagaattcttacctgtaattgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16251791_16252326
seq2: B6Ng01-306J07.b_46_581 (reverse)

seq1  CCCCACCCCCACCCCAGAGCTGTGTCTCTAGTTGCATATGTAGCAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCACCCCAGAGCTGTGTCTCTAGTTGCATATGTAGCAGAGGA  50

seq1  TGGCCTAGTCAGCCATCAATAGGAGGAGAGGCCTTTGCGAAGATCATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAGTCAGCCATCAATAGGAGGAGAGGCCTTTGCGAAGATCATATG  100

seq1  CCCCAGTACAAGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGTGGGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTACAAGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGTGGGTTGG  150

seq1  GGAGCAGGGCGGGGAGAAGGTATAGGGGGCTTTCAGGAAACCATTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGGCGGGGAGAAGGTATAGGGGGCTTTCAGGAAACCATTTAAAA  200

seq1  TGTAAATGAAAAAAATATCTAATATAAAATAAAGCATGACATAATAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAAAAAATATCTAATATAAAATAAAGCATGACATAATAAACC  250

seq1  TGTTTAAAAAAAATAAAATTTCTGGGTAAGGGCACAGCAGAAATCAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAAAAATAAAATTTCTGGGTAAGGGCACAGCAGAAATCAGAAC  300

seq1  AATGTGAAGCAATTAAATATGGATTAAAAAAATAAGATGTGTGAACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAGCAATTAAATATGGATTAAAAAAATAAGATGTGTGAACACAA  350

seq1  AAAGGTGCTAGGTTTTCAGGCCTAAGGGGATTGAATGTCAACAAACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGCTAGGTTTTCAGGCCTAAGGGGATTGAATGTCAACAAACAAGA  400

seq1  CCACAACTTCTATGACACACAGCTGCTGTCTACATTCCCCTGATATGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTTCTATGACACACAGCTGCTGTCTACATTCCCCTGATATGATG  450

seq1  GCATTCTCATTCATTTCCTAATCCAGCTAAGATTGAAAAGTCTCAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTCATTCATTTCCTAATCCAGCTAAGATTGAAAAGTCTCAAGGAA  500

seq1  ATGCTTCTAAGGAAAACTGTGACAGAAATGGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCTAAGGAAAACTGTGACAGAAATGGAATTC  536


seq1: chr14_16040630_16041549
seq2: B6Ng01-306J07.g_67_988

seq1  GAATTCCTCCCCAAGTCATGAAATCATTGATATACACAAATTGAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCAAGTCATGAAATCATTGATATACACAAATTGAGTTTTG  50

seq1  TATATTTTTTCTGTAAGTTTGGCTGTCTTTCATAGGCAGACAGAAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTTCTGTAAGTTTGGCTGTCTTTCATAGGCAGACAGAAAGCCT  100

seq1  ACCTATATAGAAAAATTAAGGTTGTAAGGCTGATAAATTAAATCCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATAGAAAAATTAAGGTTGTAAGGCTGATAAATTAAATCCTAGAT  150

seq1  GTGAAATGGCTAATAAAAGATAAATATGAGAGAAAGGAATTCTGTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGGCTAATAAAAGATAAATATGAGAGAAAGGAATTCTGTTCCAG  200

seq1  TCAGAGGTAACTTTTCTCTTTTCTCTTCTCTCTTTTCTCTTTTCTCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTAACTTTTCTCTTTTCTCTTCTCTCTTTTCTCTTTTCTCCTTT  250

seq1  CTTTCTCTTTTCTCTTTTCTTTCTCTTTTCTCTCATTTCTCTTTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTTCTCTTTTCTTTCTCTTTTCTCTCATTTCTCTTTTCTTCT  300

seq1  CTTTTCTCTTTTCTCTCCTCTCCTCTCCTCTCCTCTCCTTTTCTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTTTCTCTCCTCTCCTCTCCTCTCCTCTCCTTTTCTTTTCTC  350

seq1  TTCTCTTCTTTTCTTTTCTGTTTGTTGAGTTTTATCTTGATGACAGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTTTTCTTTTCTGTTTGTTGAGTTTTATCTTGATGACAGATTG  400

seq1  ACTAGTGTTCAGCTCTGATTATATGTCCAAGCAAGTTCAGTCAATCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGTTCAGCTCTGATTATATGTCCAAGCAAGTTCAGTCAATCAAGA  450

seq1  GGGTCTCAAGGAAGGGAGTGAGGATTAAAAACAGAAAAGACAATTAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAAGGAAGGGAGTGAGGATTAAAAACAGAAAAGACAATTAGACA  500

seq1  ACATTATAGCATGACTCCAGTCATTGCTGAAGCAGGCTTTTTTTTCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAGCATGACTCCAGTCATTGCTGAAGCAGGCTTTTTTTTCCAGT  550

seq1  CTGCTTTAATACCATTCTAGGTACATGTAAAGAATAGGGTCAGTTTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTAATACCATTCTAGGTACATGTAAAGAATAGGGTCAGTTTTAGG  600

seq1  TAAAAAACAAAGTACTCCAGGAACAAGCAAAGCATAAGCAAAGGTCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAAAGTACTCCAGGAACAAGCAAAGCATAAGCAAAGGTCTCAT  650

seq1  GATTATTGTAATTAGTTAGTGATTAAGATACAAAGAACACATTCCTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTGTAATTAGTTAGTGATTAAGATACAAAGAACACATTCCTCAGC  700

seq1  TGTATTCATCTTGAGCCCACTGTCAAATTCTTGTCTGAGCCTACTCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATCTTGAGCCCACTGTCAAATTCTTGTCTGAGCCTACTCTCTT  750

seq1  TTCCTAACCCAATGTAAATATTCTTGTTCATAAGATTGAAGCAGTACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACCCAATGTAAATATTCTTGTTCATAAGATTGAAGCAGTACCAA  800

seq1  GAGCTCTCCACATCTCCCTCCCTCCTTTTTTAAATTTCATAAACAAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTCCACATCTCCCTCCCTCCTTTTTTAAATTTCATAAACAAGACT  850

seq1  GCATCTATCTTAGGTTGTTCTAACAAATATT-AACCTCC-TTACCTGAAT  898
      |||||||||||||||||||||||| |||||| ||||||| ||||||||||
seq2  GCATCTATCTTAGGTTGTTCTAAC-AATATTAAACCTCCTTTACCTGAAT  899

seq1  ATGCATTA-TCCAAAGCAATGTA  920
      |||||||| ||||||||||||||
seq2  ATGCATTATTCCAAAGCAATGTA  922


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