BAC Information

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BAC

Clone NameB6Ng01-307M01
Chromosome14 (Build37)
Map Location 21,951,048 - 22,093,103
singlet/doubletdoublet
Overlap geneAdk
Upstream geneKcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307M01.bB6Ng01-307M01.g
ACCGA100443GA100444
length1,1211,095
definitionB6Ng01-307M01.b B6Ng01-307M01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,091,996 - 22,093,103)(21,951,048 - 21,952,134)
sequence
gaattcctgagggaggagagcagttataactctttcatttatacttgacg
gtttccattagcctttcctagaaatctcagtaaacaattactggcagtca
ctttatgatttaggtaaggttcaacaggcacttcctctaaataaggaaac
caaggttaagagaggttaaatggctcagagcagaacagagatggaactga
ctgcatagctatggggcgttgtggggcgctcaggaactaactcacccttt
cctctgaacaggtgcaaacacactataatgtgatactatggaatgccaac
ttgcttcttctccactgcagccactttcagcctcgtaaggtactttataa
acaaagggagtaattactgctattatacctcaaaattaatttcattaatt
gtgtaataattgctatgtagcttatactagagaatcagtttagaaacaaa
caagaaagacaggtattgatattcaaatttagagatatacttaaattata
aaaaaattattttttttatttagtgtgtgtatttctgtgggagtgagtgc
cacagagcacatgtggaggtcacagagcaacttaagggaatcagttcttt
cttttcacctttacataggttggcaggccaaattcaggtggtctagcaca
cacccttaccggctgagcagaatcccgatttagatatattaatggcattt
aaattgttatcaataagtcatttactaaaatctcaaaatgtatcaggtta
ggagccgctgattttaggaatttgtttgctctgttttgtttagcagagaa
tacatgtaacatccatccttgctatttctgaaccagaagaggaaaaaaaa
aagagttaaaccatataggtgaataggtaaacagtctatgtaatcaaact
gtaactgtatgtttacaagcatgtgagtatgcaaatgtgagcattgcatg
ggcatccagaggtcagtgcaggaaaagggggtgtcttcctcttgttctct
tcctacttgagtaagcacagtcttctaccacaactgggagctaccactgt
tttcaagccaacaggtctttgtggggcctttcatttcttcttaccctcta
ctgctgaggttacagggctct
gaattctgctccccaccactgcccaactgttttgttttgttttaattaat
ttattttttattagatattttctttatatacatttcaaatactatcccaa
aagttccctataccctccccccgcccccgctctgctcccgtacccaccca
ctcctgcttgttggccctggcattcccctgtactggggcatataaagttt
gcaataccaaggggcctctcttgtctttttaaagaagagtgatttcatga
ttttgcctgtatgagtactttgcctgcatacatgtgtatgtaccatgtgt
gtgcctggtgctcactgaagtctgaagagagtgtcagttacattacccag
cactagagttaggcatgcttgtgagctgtcatgtgggtgctgggaattga
acctgggtcttcttctgtaagcagctccaagtgacttcagcaactccagc
tgtcccgccccagcatttgtctctagatttagtcaggtgcatgtgtgcgt
atgtgcacatgggggaaggtgacctcttaagagcatcgagctggagtgac
agcaggtgtgagctggatcatgtccatgcagccctcttggtgttttaaag
agcgagtctttgtgtgtagtacaggctggctttcagttcactgtagctca
ggttggcctcaaattcatcatccttctgcttcaccttcggaaggcttgta
ctcaggcttgtgccaccattcccaaaagtacagaagtgtaggctacatct
tatccttgcttccttgtttcttccaacaccaacaccaccaccaccatgac
cacctgctcctccttttcttcttcgtgtcattgttctatctcttcttcct
ctttttgtttttcttcttcttgttcttgtcctccttccttctcattttcc
tcttcttctctgttgcttcttctcttctttagttaaatctttaaaaaaat
ttttttttggagtgactggagagatgggctcagtattaaaggaatattta
ctgcctcttacagagactgggttgggttcccagccacaacatttcatggc
tctccacaacacttgtactccagttcccaggagaatgcccatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22091996_22093103
seq2: B6Ng01-307M01.b_44_1164 (reverse)

seq1  AGAG-CCTGTAACCTCAGCGGTAGGGGGTA--GAGAAATGAA--GCCCCA  45
      |||| |||||||||||||| |||| |||||   |||||||||  ||||||
seq2  AGAGCCCTGTAACCTCAGCAGTAGAGGGTAAGAAGAAATGAAAGGCCCCA  50

seq1  CAA--GCCTGTTGGCT--AGAACAGT-GTAGCT-CCAG-TGTGGTAAGAG  88
      |||   ||||||||||  | |||||| |||||| |||| |||||||  ||
seq2  CAAAGACCTGTTGGCTTGAAAACAGTGGTAGCTCCCAGTTGTGGTAGAAG  100

seq1  ACTGTGCTTACTCAGTAAGGAAGAGAACAAGAGG-AGACA-CCCCTTTTC  136
      ||||||||||||||   ||||||||||||||||| ||||| |||||||||
seq2  ACTGTGCTTACTCAAGTAGGAAGAGAACAAGAGGAAGACACCCCCTTTTC  150

seq1  CTGCACTGACCTCTGGATGCCCATGCAATGCTCACATTTGCATACTCACA  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGACCTCTGGATGCCCATGCAATGCTCACATTTGCATACTCACA  200

seq1  TGCTTGTAAAACATACAGTTACAGTTTGATTACATAGACTGTTTACCTAT  236
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGT-AAACATACAGTTACAGTTTGATTACATAGACTGTTTACCTAT  249

seq1  TCACCTATATGGTTTAACTCTTTTTTTTTTCCTCTTCTGGTTCAGAAATA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTATATGGTTTAACTCTTTTTTTTTTCCTCTTCTGGTTCAGAAATA  299

seq1  GCAAGGATGGATGTTACATGTATTCTCTGCTAAACAAAACAGAGCAAACA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATGGATGTTACATGTATTCTCTGCTAAACAAAACAGAGCAAACA  349

seq1  AATTCCTAAAATCAGCGGCTCCTAACCTGATACATTTTGAGATTTTAGTA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAAAATCAGCGGCTCCTAACCTGATACATTTTGAGATTTTAGTA  399

seq1  AATGACTTATTGATAACAATTTAAATGCCATTAATATATCTAAATCGGGA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTTATTGATAACAATTTAAATGCCATTAATATATCTAAATCGGGA  449

seq1  TTCTGCTCAGCCGGTAAGGGTGTGTGCTAGACCACCTGAATTTGGCCTGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCAGCCGGTAAGGGTGTGTGCTAGACCACCTGAATTTGGCCTGC  499

seq1  CAACCTATGTAAAGGTGAAAAGAAAGAACTGATTCCCTTAAGTTGCTCTG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTATGTAAAGGTGAAAAGAAAGAACTGATTCCCTTAAGTTGCTCTG  549

seq1  TGACCTCCACATGTGCTCTGTGGCACTCACTCCCACAGAAATACACACAC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCACATGTGCTCTGTGGCACTCACTCCCACAGAAATACACACAC  599

seq1  TAAATAAAAAAAATAATTTTTTTATAATTTAAGTATATCTCTAAATTTGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAAAAATAATTTTTTTATAATTTAAGTATATCTCTAAATTTGA  649

seq1  ATATCAATACCTGTCTTTCTTGTTTGTTTCTAAACTGATTCTCTAGTATA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATACCTGTCTTTCTTGTTTGTTTCTAAACTGATTCTCTAGTATA  699

seq1  AGCTACATAGCAATTATTACACAATTAATGAAATTAATTTTGAGGTATAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATAGCAATTATTACACAATTAATGAAATTAATTTTGAGGTATAA  749

seq1  TAGCAGTAATTACTCCCTTTGTTTATAAAGTACCTTACGAGGCTGAAAGT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTAATTACTCCCTTTGTTTATAAAGTACCTTACGAGGCTGAAAGT  799

seq1  GGCTGCAGTGGAGAAGAAGCAAGTTGGCATTCCATAGTATCACATTATAG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGTGGAGAAGAAGCAAGTTGGCATTCCATAGTATCACATTATAG  849

seq1  TGTGTTTGCACCTGTTCAGAGGAAAGGGTGAGTTAGTTCCTGAGCGCCCC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCACCTGTTCAGAGGAAAGGGTGAGTTAGTTCCTGAGCGCCCC  899

seq1  ACAACGCCCCATAGCTATGCAGTCAGTTCCATCTCTGTTCTGCTCTGAGC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGCCCCATAGCTATGCAGTCAGTTCCATCTCTGTTCTGCTCTGAGC  949

seq1  CATTTAACCTCTCTTAACCTTGGTTTCCTTATTTAGAGGAAGTGCCTGTT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACCTCTCTTAACCTTGGTTTCCTTATTTAGAGGAAGTGCCTGTT  999

seq1  GAACCTTACCTAAATCATAAAGTGACTGCCAGTAATTGTTTACTGAGATT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTACCTAAATCATAAAGTGACTGCCAGTAATTGTTTACTGAGATT  1049

seq1  TCTAGGAAAGGCTAATGGAAACCGTCAAGTATAAATGAAAGAGTTATAAC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAAGGCTAATGGAAACCGTCAAGTATAAATGAAAGAGTTATAAC  1099

seq1  TGCTCTCCTCCCTCAGGAATTC  1108
      ||||||||||||||||||||||
seq2  TGCTCTCCTCCCTCAGGAATTC  1121

seq1: chr14_21951048_21952134
seq2: B6Ng01-307M01.g_66_1160

seq1  GAATTCTGCTCCCCACCACTGCCCAACTGTTTTGTTTTGTTTTAATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTCCCCACCACTGCCCAACTGTTTTGTTTTGTTTTAATTAAT  50

seq1  TTATTTTTTATTAGATATTTTCTTTATATACATTTCAAATACTATCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTATTAGATATTTTCTTTATATACATTTCAAATACTATCCCAA  100

seq1  AAGTTCCCTATACCCTCCCCCCGCCCCCGCTCTGCTCCCGTACCCACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCCTATACCCTCCCCCCGCCCCCGCTCTGCTCCCGTACCCACCCA  150

seq1  CTCCTGCTTGTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCTTGTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTT  200

seq1  GCAATACCAAGGGGCCTCTCTTGTCTTTTTAAAGAAGAGTGATTTCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATACCAAGGGGCCTCTCTTGTCTTTTTAAAGAAGAGTGATTTCATGA  250

seq1  TTTTGCCTGTATGAGTACTTTGCCTGCATACATGTGTATGTACCATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTGTATGAGTACTTTGCCTGCATACATGTGTATGTACCATGTGT  300

seq1  GTGCCTGGTGCTCACTGAAGTCTGAAGAGAGTGTCAGTTACATTACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGTGCTCACTGAAGTCTGAAGAGAGTGTCAGTTACATTACCCAG  350

seq1  CACTAGAGTTAGGCATGCTTGTGAGCTGTCATGTGGGTGCTGGGAATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAGTTAGGCATGCTTGTGAGCTGTCATGTGGGTGCTGGGAATTGA  400

seq1  ACCTGGGTCTTCTTCTGTAAGCAGCTCCAAGTGACTTCAGCAACTCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGTCTTCTTCTGTAAGCAGCTCCAAGTGACTTCAGCAACTCCAGC  450

seq1  TGTCCCGCCCCAGCATTTGTCTCTAGATTTAGTCAGGTGCATGTGTGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCGCCCCAGCATTTGTCTCTAGATTTAGTCAGGTGCATGTGTGCGT  500

seq1  ATGTGCACATGGGGGAAGGTGACCTCTTAAGAGCATCGAGCTGGAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGGGGGAAGGTGACCTCTTAAGAGCATCGAGCTGGAGTGAC  550

seq1  AGCAGGTGTGAGCTGGATCATGTCCATGCAGCCCTCTTGGTGTTTTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGTGAGCTGGATCATGTCCATGCAGCCCTCTTGGTGTTTTAAAG  600

seq1  AGCGAGTCTTTGTGTGTAGTACAGGCTGGCTTTCAGTTCACTGTAGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGTCTTTGTGTGTAGTACAGGCTGGCTTTCAGTTCACTGTAGCTCA  650

seq1  GGTTGGCCTCAAATTCATCATCCTTCTGCTTCACCTTCGGAAGGCTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCCTCAAATTCATCATCCTTCTGCTTCACCTTCGGAAGGCTTGTA  700

seq1  CTCAGGCTTGTGCCACCATTCCCAAAAGTACAGAAGTGTAGGCTACATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTTGTGCCACCATTCCCAAAAGTACAGAAGTGTAGGCTACATCT  750

seq1  TATCCTTGCTTCCTTGTTTCTTCCAACACCAACACCACCACCACCATGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTGCTTCCTTGTTTCTTCCAACACCAACACCACCACCACCATGAC  800

seq1  CACCTGCTCCTCCTTTTCTTCTTCGTGTCATTGTTCTATCTCTTCTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTCCTCCTTTTCTTCTTCGTGTCATTGTTCTATCTCTTCTTCCT  850

seq1  CTTTTTGTTTTTCTTCTTCTTGTTCTTGTCCTCC-TCCTTCTTCATTTTC  899
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CTTTTTGTTTTTCTTCTTCTTGTTCTTGTCCTCCTTCCTTC-TCATTTTC  899

seq1  CTCTTCTTCTCTGTTGCTTCTTCTCTTCTTTAGTTAAATCTTTAAAAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTCTCTGTTGCTTCTTCTCTTCTTTAGTTAAATCTTTAAAAAAA  949

seq1  -TTTTTTTTGGAGTGACTGGAGAGAT-GGCTCAGTATTAAA-GAATATTT  996
       ||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TTTTTTTTTGGAGTGACTGGAGAGATGGGCTCAGTATTAAAGGAATATTT  999

seq1  ACTG-CTCTTACAGAGGACTGGGTTTGGTTCCCAGCAACAACATTCCATG  1045
      |||| |||||||||| ||||||||| |||||||||| |||||||| ||||
seq2  ACTGCCTCTTACAGA-GACTGGGTTGGGTTCCCAGCCACAACATTTCATG  1048

seq1  GCT---CACAACACCTGTAACTTCAGTT-CCAGGAG-ATGCCC-TGTG  1087
      |||   |||||||| ||| ||| ||||| ||||||| |||||| ||||
seq2  GCTCTCCACAACACTTGT-ACTCCAGTTCCCAGGAGAATGCCCATGTG  1095