BAC Information

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BAC

Clone NameB6Ng01-309C05
Chromosome14 (Build37)
Map Location 74,221,458 - 74,222,578
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
Downstream geneEG629578, LOC629583, Htr2a, LOC668508, Esd, Lrch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309C05.bB6Ng01-309C05.g
ACCGA101454GA101455
length1,1131,165
definitionB6Ng01-309C05.b B6Ng01-309C05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttttcatctattcatgtgaattcaaacacttttctacagtc
tggaaacccagtaatgagcagggcaaccccctttctagagaagctcctgt
cccagtaaggaggagagacaataaaggcatcaatgagtagttagatactg
ggttgagatgattatctcaggtctctaaagtctccactgtaagaggtaga
agatgagagagggtctgcctccaaagactggggaaaggaattttccaggc
agaacatgtcaagacaaagaagtgaactcagggtagtgatgaattgagaa
gaaatccctgtgctggtagtctggaatgtaggggcatgaactctacacat
gtgcataagatcatacatacttcctgtgaagatgggtcaagagtaagact
ggtggccagtacagcctcaaagtggatgcttgcccttgctgcctcatggg
aagcatataacccaatccttgaccccaaaatctgttgatgcatagagaag
tgctcgattctcttccttcttgcctaggatcctgtaaaattaaaattaga
tctgtagcttatcttaatgatatgtgccaaaggtgttcaccaaagacaaa
tataatagccaattcttaaaggaaccctattaaatgtttcccaaaagtta
tgactaaatttactcttcaggtagaaaaagtggtgacccatttcttaata
tatatatatatatatatatatatatatatatattacctacccattcatta
cctacccactggcatatagtcatatgccaagtcatgtacactatgcttca
gtgaaatatgagtgtttacgaagaatgaataacaagcaaatatttcatta
tgtctgtcttatctgcttttatggtataataattaccttttaaaagaata
aaaactctcttttgttttcaggctttaagcaacaaggaattatgatgtcc
tagctaagtgactcaagggtatttgtctctccaaaaaaacaaattatcct
gattcagtctcggactttctgggaggacggaattaacaccattgagtcat
tacagaacacttaccacatgttccactgttctgagtctgctacatctctc
aggcatctgaggc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggctcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagataatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgaatgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaatgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcatagggctcc
caatggaggagctagagaaagtagccaaggagctaaagggatctgcaccc
tataggtgaacaacatatgactaaccatacccgagctctgactctagctg
catataatatcaaagatggccttagtcgccatcactgaaagagagccatt
tggtacttgcatttatatgcccagatcaggtaaacactcatggctcctaa
aaaggggaattgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74221458_74222578
seq2: B6Ng01-309C05.b_45_1157 (reverse)

seq1  GCCTCAGAGGCTTGAGAGAATGTAGGCAGACTCAGAACAGTGG-ACATGT  49
      |||||||| || |||||| ||||| |||||||||||||||||| ||||||
seq2  GCCTCAGATGCCTGAGAG-ATGTA-GCAGACTCAGAACAGTGGAACATGT  48

seq1  GGTAAGTGTTCTGTAATGGCTC-ATGGTGTTTTATTTTCTGTTCTTCCCA  98
      |||||||||||||||||| ||| ||||||  ||| || |   || |||||
seq2  GGTAAGTGTTCTGTAATGACTCAATGGTG--TTAATTCC--GTCCTCCCA  94

seq1  GAAAGTCCGAGACTGAATCAGGATAATTTTGTTTTTTTGGAGAGACAAAT  148
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAAGTCCGAGACTGAATCAGGATAA-TTTGTTTTTTTGGAGAGACAAAT  143

seq1  ACCCTTGAGTCACTTAGCTAGGGACATCATAATTCCTTGTTGCTTAAAGC  198
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  ACCCTTGAGTCACTTAGCTA-GGACATCATAATTCCTTGTTGCTTAAAG-  191

seq1  CCTGAAAACAAAAGAGAGTTTTTATTCTTTTTAAAGGTAATTTATTATAC  248
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CCTGAAAACAAAAGAGAGTTTTTATTCTTTTAAAAGGTAA-TTATTATAC  240

seq1  CATAAAAGCAGATAAGACAGACATAATGAAATATTTGCTTGTTATTCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGCAGATAAGACAGACATAATGAAATATTTGCTTGTTATTCATT  290

seq1  CTTCGTAAACACTCATATTTCACTGAAGCATAGTGTACCTGACTTGGCAT  348
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTCGTAAACACTCATATTTCACTGAAGCATAGTGTACATGACTTGGCAT  340

seq1  ATGACTATATGCCAGTGGGTAGGTAATGAATGGGTAGGTAATATATATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATATGCCAGTGGGTAGGTAATGAATGGGTAGGTAATATATATAT  390

seq1  ATATATATATATATATATATATATATTAAGAAATGGGTCACCACTTTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATTAAGAAATGGGTCACCACTTTTTC  440

seq1  TACCTGAAGAGTAAATTTAGTCATAACTTTTGGGAAACATTTAATAGGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAAGAGTAAATTTAGTCATAACTTTTGGGAAACATTTAATAGGGT  490

seq1  TCCTTTAAGAATTGGCTATTATATTTGTCTTTGGTGAACACCTTTGGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAGAATTGGCTATTATATTTGTCTTTGGTGAACACCTTTGGCAC  540

seq1  ATATCATTAAGATAAGCTACAGATCTAATTTTAATTTTACAGGATCCTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTAAGATAAGCTACAGATCTAATTTTAATTTTACAGGATCCTAG  590

seq1  GCAAGAAGGAAGAGAATCGAGCACTTCTCTATGCATCAACAGATTTTGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGGAAGAGAATCGAGCACTTCTCTATGCATCAACAGATTTTGGG  640

seq1  GTCAAGGATTGGGTTATATGCTTCCCATGAGGCAGCAAGGGCAAGCATCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGATTGGGTTATATGCTTCCCATGAGGCAGCAAGGGCAAGCATCC  690

seq1  ACTTTGAGGCTGTACTGGCCACCAGTCTTACTCTTGACCCATCTTCACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAGGCTGTACTGGCCACCAGTCTTACTCTTGACCCATCTTCACAG  740

seq1  GAAGTATGTATGATCTTATGCACATGTGTAGAGTTCATGCCCCTACATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGTATGATCTTATGCACATGTGTAGAGTTCATGCCCCTACATTC  790

seq1  CAGACTACCAGCACAGGGATTTCTTCTCAATTCATCACTACCCTGAGTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTACCAGCACAGGGATTTCTTCTCAATTCATCACTACCCTGAGTTC  840

seq1  ACTTCTTTGTCTTGACATGTTCTGCCTGGAAAATTCCTTTCCCCAGTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTGTCTTGACATGTTCTGCCTGGAAAATTCCTTTCCCCAGTCTT  890

seq1  TGGAGGCAGACCCTCTCTCATCTTCTACCTCTTACAGTGGAGACTTTAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGACCCTCTCTCATCTTCTACCTCTTACAGTGGAGACTTTAGA  940

seq1  GACCTGAGATAATCATCTCAACCCAGTATCTAACTACTCATTGATGCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGAGATAATCATCTCAACCCAGTATCTAACTACTCATTGATGCCTT  990

seq1  TATTGTCTCTCCTCCTTACTGGGACAGGAGCTTCTCTAGAAAGGGGGTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTCTCCTCCTTACTGGGACAGGAGCTTCTCTAGAAAGGGGGTTG  1040

seq1  CCCTGCTCATTACTGGGTTTCCAGACTGTAGAAAAGTGTTTGAATTCACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTCATTACTGGGTTTCCAGACTGTAGAAAAGTGTTTGAATTCACA  1090

seq1  TGAATAGATGAAAAAGTGAATTC  1121
      |||||||||||||||||||||||
seq2  TGAATAGATGAAAAAGTGAATTC  1113