BAC Information

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BAC

Clone NameB6Ng01-310H07
ChromosomeX (Build37)14 (Build37)
Map Location 23,328,471 - 23,329,08386,220,251 - 86,220,806
singlet/doubletsingletsinglet
Overlap geneWdr44
Upstream geneKlhl13, EG635719
Downstream geneEG236749, EG214450, EG245376, LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310H07.bB6Ng01-310H07.g
ACCGA102427GA102428
length1,0091,005
definitionB6Ng01-310H07.b B6Ng01-310H07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(23,328,471 - 23,329,083)(86,220,251 - 86,220,806)
sequence
gaattctaaaatgtatatgatagtggctacttcccttcacaacaatgaag
agtgctatggatggagaaactgcaaagtggagaataagctgttttgctgg
actctagaaacttaactggctagaataatgcccatggaccagaacaacac
tcaaaacttatataagaaaattaatacaaatatcttttcctttggatgtt
acattgctactacaaactactacaaatagcccattttacaatgcttttgt
ttttctttcctttatttttaaaaaaattatttatttatttacagaccaaa
cactgttcccccttcctgcctcccacccctcacagagccctctgagaaat
gactaagacagatgcagatacttatagccaaccattggactaggtcaggg
acccctatggaagggttagggtaaaaggactgaaggagctgaaggggaca
gcaaccccacaggaagaccaacagtatcaactaacccagacccctgcaag
ctcccaaagactaagacaccaaccaagagcatacatgggatagtctgtgg
accctgcaacacatatagcaggagactgccttgtctgtcctctgtgggag
aggatatgccttatcctgtagagacttgatgccccagggaagtggggtga
agggggaaggaccctctcagaggtgaaggggaggaagaaagtatgaagaa
ctctggaaatggggactgggagggggacaacatttgggatgtaaataaat
aattaattttaaataggagcattaaaaataataaaataaaacaaaattat
ttacttatttatttgcatttccaaatgatgagcctctcccagtcccctct
tcacagtccctctttcctatccccctgtcccttcacctctcagaggatgc
cctgcccctgagtatcccccaatgcttttttttaaagttgtatgtatgtg
tgcactacatgcagaaatcagctaatgataccctgttaccttcctccatc
actcttacc

gaattcctgatctttccaagacttttatcatgaatgggtgtaggattttg
ccaaatgtttctctgcttctaaggagatgatcatgtggtttttgtctttg
agattgtttatataatggattatgttgatggatttctatatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgttt
taatatgttcttggattcggttagcgagaattttattgattatttttgca
tcaatatttcataaggaaaaatggtctgaagttctctatctttgttggat
ctttctatggtttaggtatcagagtaattgtggcttcaaagaaagagttg
ggtagagtaccttctacttctattttgtggaatagtttttgaagaacttg
aattagatcttctttgaagctctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggttggtagactattaatgactgcttctatttct
ttagggaatatgggactgtttagagcattaacttgatcctgatttaactt
tggtaccctggtatctatctagaaattttccattttgtccaggttttcca
gttttattgagtatagccttttgtagaaggatctgacggtgttttggatt
tcttcagggtttgttgttatgtctcccttttcatttctgattttgttaat
taggaggctgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccagctcctcgtttggttgattctttga
ataatgcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccatctactcctcttgggtgaatttgcttcccttattttctaga
gctttttaagtgtgttgttaagctgctagtgtgtgctctctctagtttct
ttttggaggcactcagagctaggagttccctcttaagaaatgcctttcaa
ttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_23328471_23329083
seq2: B6Ng01-310H07.b_44_656 (reverse)

seq1  TAAGGCATATCCTCTCCCACAGAGGACAGACAAGGCAGTCTCCTGCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATATCCTCTCCCACAGAGGACAGACAAGGCAGTCTCCTGCTATA  50

seq1  TGTGTTGCAGGGTCCACAGACTATCCCATGTATGCTCTTGGTTGGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCAGGGTCCACAGACTATCCCATGTATGCTCTTGGTTGGTGTCT  100

seq1  TAGTCTTTGGGAGCTTGCAGGGGTCTGGGTTAGTTGATACTGTTGGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGGGAGCTTGCAGGGGTCTGGGTTAGTTGATACTGTTGGTCTT  150

seq1  CCTGTGGGGTTGCTGTCCCCTTCAGCTCCTTCAGTCCTTTTACCCTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGGTTGCTGTCCCCTTCAGCTCCTTCAGTCCTTTTACCCTAACC  200

seq1  CTTCCATAGGGGTCCCTGACCTAGTCCAATGGTTGGCTATAAGTATCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAGGGGTCCCTGACCTAGTCCAATGGTTGGCTATAAGTATCTGC  250

seq1  ATCTGTCTTAGTCATTTCTCAGAGGGCTCTGTGAGGGGTGGGAGGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTTAGTCATTTCTCAGAGGGCTCTGTGAGGGGTGGGAGGCAGGA  300

seq1  AGGGGGAACAGTGTTTGGTCTGTAAATAAATAAATAATTTTTTTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAACAGTGTTTGGTCTGTAAATAAATAAATAATTTTTTTAAAAAT  350

seq1  AAAGGAAAGAAAAACAAAAGCATTGTAAAATGGGCTATTTGTAGTAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGAAAAACAAAAGCATTGTAAAATGGGCTATTTGTAGTAGTTT  400

seq1  GTAGTAGCAATGTAACATCCAAAGGAAAAGATATTTGTATTAATTTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGCAATGTAACATCCAAAGGAAAAGATATTTGTATTAATTTTCTT  450

seq1  ATATAAGTTTTGAGTGTTGTTCTGGTCCATGGGCATTATTCTAGCCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTTTTGAGTGTTGTTCTGGTCCATGGGCATTATTCTAGCCAGTT  500

seq1  AAGTTTCTAGAGTCCAGCAAAACAGCTTATTCTCCACTTTGCAGTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTAGAGTCCAGCAAAACAGCTTATTCTCCACTTTGCAGTTTCTC  550

seq1  CATCCATAGCACTCTTCATTGTTGTGAAGGGAAGTAGCCACTATCATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATAGCACTCTTCATTGTTGTGAAGGGAAGTAGCCACTATCATATA  600

seq1  CATTTTAGAATTC  613
      |||||||||||||
seq2  CATTTTAGAATTC  613


seq1: chr14_86220251_86220806
seq2: B6Ng01-310H07.g_516_1067 (reverse)

seq1  CACAA-TGAAA-GCATTTCTATCAG-GGAAACTCATAGCTCTGAGTGCCT  47
      ||||| ||||| |||||||| | || || ||||| |||||||||||||||
seq2  CACAATTGAAAGGCATTTCT-TAAGAGGGAACTCCTAGCTCTGAGTGCCT  49

seq1  CCAAAAAGAAACTACAGAGAGCACACACTGCCAGCTTGACAACACACCT-  96
      |||||||||||||| ||||||||||||||  |||||| ||||||||| | 
seq2  CCAAAAAGAAACTAGAGAGAGCACACACTAGCAGCTTAACAACACACTTA  99

seq1  AAAAGCTCT--AAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGATGG  144
      |||||||||  |||| || |||||||||||||||||||||||||||||||
seq2  AAAAGCTCTAGAAAATAAGGGAAGCAAATTCACCCAAGAGGAGTAGATGG  149

seq1  CAGGAAATATTCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAG  194
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAG  199

seq1  AACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCA  244
       | |||||||||||| |||||||||||||| |||||||||||||||||||
seq2  CATTATTCAAAGAATCAACCAAACGAGGAGCTGGTTCTTTGAGAAAATCA  249

seq1  ACAAGATAGATAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGACAGC  294
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACAAGATAGATAAACCCTTAGCTAGACTCACTAGAGGGCACAGGGACAGC  299

seq1  ATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAAACAC  344
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAAACCC  349

seq1  GGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAA  394
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGAAGAAATCCAAAACACCGTCAGATCCTTCTACAAAAGGCTATACTCAA  399

seq1  CAAAACTGGAAAACCTGGATGAAATGGAAAAAATTTCTAGACAGATACCA  444
       ||||||||||||||||||  ||||||  |||||||||||| ||||||||
seq2  TAAAACTGGAAAACCTGGACAAAATGG--AAAATTTCTAGATAGATACCA  447

seq1  -GGTACCAAAGTTAAACCAGGATCAATTTAACGATCTAAACAGTCCCATA  493
       ||||||||||||||| ||||||||| |||| | ||||||||||||||||
seq2  GGGTACCAAAGTTAAATCAGGATCAAGTTAATGCTCTAAACAGTCCCATA  497

seq1  TCCCCTAAAGAAATATAAGCAGTCATTAATGGTCTCCAAATCAAAAAAAA  543
      | ||||||||||||| |||||||||||||| |||| | || |        
seq2  TTCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTACCAACC--------  539

seq1  AAAAAAAGCCCAG  556
      |||||||||||||
seq2  AAAAAAAGCCCAG  552


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