BAC Information

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BAC

Clone NameB6Ng01-310K02
Chromosome14 (Build37)
Map Location 91,124,573 - 91,299,715
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451, LOC100043336
Downstream geneEG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K02.bB6Ng01-310K02.g
ACCGA102557GA102558
length1,103815
definitionB6Ng01-310K02.b B6Ng01-310K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,124,573 - 91,125,687)(91,298,904 - 91,299,715)
sequence
gaattcttcactcaatggtataaaagggaagtgctttgtgttttgagaat
ggaatatttgttacttgattttctttcagctaaggcaatcattttgaaac
gaaacaactgagctgtacaatgatttctggatgactaaaagttatgtgcc
tatcaatgatctcctgttcttagcatttcctatatatgcttgtgcttgca
attactaaattaacctcctaacaggaaaccagaaaagcccttgagtttgt
attacatctcagtatggagggaccttaatttgccagatgttcacttttaa
taaaaaaaaaatataatgtttataaagtccagcaggctcttaggaaagct
attgtcatcatacttttcccattctatttttccctttctccttggtcata
caggaaactcctctattttatgatgaattccttcaataccccaaagtgcc
tttaaaatttttaatagtctttccatctgataaagaacacatattccact
ctctggttgtatatttgtgcttcctttatcaagtggaccctgaaggggga
atttgggagctctaatggttggctgctctagtgttcttataatagtaatg
tttttagcatcaccatagttaaggagttgtcagcacgtttaaactcctac
tttagtgaaattttgcttcgtgtattagcactcagcacaggagcaatttt
cattttaagctttaaaaatcatctcttaggatatttgtgatgatgtgctt
aaaagttaaaacaaaagcttactgttctcagatgattctgatcctcccta
agattgctctttgcaaatttcttccctgaataaaatcaattagttcgtaa
tagctaaaaaagagtggaaagatttttaggagatgtgatgacggataaaa
tgccattttgcacaccaagactacattacaaaatatcagaagcaaaaatg
ttgataaataagattgcaaaaattttaatatttacagatttccactcacg
ggaaaaacagcctcagctgaaaaatatgcttaatgtaaactctttcaatg
gagattaggattagcttagactaagtatggattcaaatgattacagaact
tta

gaattcacgttctaattggcgcctgtgtgctttagttttcaaaaaagtca
tgccattagattaaatttatcttcattttgtatccatttttatagtctca
tcatatactaagatttaattcaatgtattataactaacctagattcatga
catcagcctatgtattctacacaaaaccaaaacactcccatttagacttt
tatttagatgtttaacagtgcccagtaattaaacaattggcgatatactc
atcactgtagttatggcctcaccaaacatataaatatatccttagatatt
ttttatttattttataaatatgttgcacagatgtgtgcaaatatatttaa
aggagattatagatttgttattttagatgaatgttctctttttcaagata
aattgtcttaacaaataccatttacatctgattattctcctttatgattt
acatttattttacgtatgtgatatgtgatatgcttatcacatgcatgagg
agtttgatgccttaggaatgatggtataggaggttgtgagctctcatata
ggtttcaagaatggaacatggtttctttctaagagtagtaggagctctta
gccaggaattcatctctctagggcctcagattattcataaatattcaaca
ttttttttcaagaaatgatttctctgtgtagtcctggctgtcctagaact
cactctgtagaccaggctagccttaaactcagaaatctgcctgcctctgc
ctctcaagttactggggattaaagatgtgcgccatcactgcccaggctac
ttagaatacatcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_91124573_91125687
seq2: B6Ng01-310K02.b_47_1149

seq1  GAATTCTTCACTCAATGGTATAAAAGGGAAGTGCTTTGTGTTTTGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTCAATGGTATAAAAGGGAAGTGCTTTGTGTTTTGAGAAT  50

seq1  GGAATATTTGTTACTTGATTTTCTTTCAGCTAAGGCAATCATTTTGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTGTTACTTGATTTTCTTTCAGCTAAGGCAATCATTTTGAAAC  100

seq1  GAAACAACTGAGCTGTACAATGATTTCTGGATGACTAAAAGTTATGTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACTGAGCTGTACAATGATTTCTGGATGACTAAAAGTTATGTGCC  150

seq1  TATCAATGATCTCCTGTTCTTAGCATTTCCTATATATGCTTGTGCTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGATCTCCTGTTCTTAGCATTTCCTATATATGCTTGTGCTTGCA  200

seq1  ATTACTAAATTAACCTCCTAACAGGAAACCAGAAAAGCCCTTGAGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAATTAACCTCCTAACAGGAAACCAGAAAAGCCCTTGAGTTTGT  250

seq1  ATTACATCTCAGTATGGAGGGACCTTAATTTGCCAGATGTTCACTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCTCAGTATGGAGGGACCTTAATTTGCCAGATGTTCACTTTTAA  300

seq1  TAAAAAAAAAATATAATGTTTATAAAGTCCAGCAGGCTCTTAGGAAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAATATAATGTTTATAAAGTCCAGCAGGCTCTTAGGAAAGCT  350

seq1  ATTGTCATCATACTTTTCCCATTCTATTTTTCCCTTTCTCCTTGGTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATCATACTTTTCCCATTCTATTTTTCCCTTTCTCCTTGGTCATA  400

seq1  CAGGAAACTCCTCTATTTTATGATGAATTCCTTCAATACCCCAAAGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACTCCTCTATTTTATGATGAATTCCTTCAATACCCCAAAGTGCC  450

seq1  TTTAAAATTTTTAATAGTCTTTCCATCTGATAAAGAACACATATTCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTTTTAATAGTCTTTCCATCTGATAAAGAACACATATTCCACT  500

seq1  CTCTGGTTGTATATTTGTGCTTCCTTTATCAAGTGGACCCTGAAGGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGTATATTTGTGCTTCCTTTATCAAGTGGACCCTGAAGGGGGA  550

seq1  ATTTGGGAGCTCTAATGGTTGGCTGCTCTAGTGTTCTTATAATAGTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGCTCTAATGGTTGGCTGCTCTAGTGTTCTTATAATAGTAATG  600

seq1  TTTTTAGCATCACCATAGTTAAGGAGTTGTCAGCACGTTTAAACTCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCATCACCATAGTTAAGGAGTTGTCAGCACGTTTAAACTCCTAC  650

seq1  TTTAGTGAAATTTTGCTTCGTGTATTAGCACTCAGCACAGGAGCAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGAAATTTTGCTTCGTGTATTAGCACTCAGCACAGGAGCAATTTT  700

seq1  CATTTTAAGCTTTAAAAATCATCTCTTAGGATATTTGTGATGATGTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGCTTTAAAAATCATCTCTTAGGATATTTGTGATGATGTGCTT  750

seq1  AAAAGTTAAAACAAAAGCTTACTGTTCTCAGATGATTCTGATCCTCCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAAAACAAAAGCTTACTGTTCTCAGATGATTCTGATCCTCCCTA  800

seq1  AGATTGCTCTTTGCAAATTTCTTCCCTGAATAAAATCAATTAGTTCGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTCTTTGCAAATTTCTTCCCTGAATAAAATCAATTAGTTCGTAA  850

seq1  TAGCTAAAAAAGAGTGGAAAGATTTTTAGGAGATGTGATGACGGATAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAAAAAGAGTGGAAAGATTTTTAGGAGATGTGATGACGGATAAAA  900

seq1  TGCCATTTTGCACACCAAGACTACATTACAAAATATCAGAAGCAAAAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTGCACACCAAGACTACATTACAAAATATCAGAAGCAAAAATG  950

seq1  TTGATAAATAAGAATTGCAAAAATTTTAATATTTAACAGA-TTCCACTCA  999
      |||||||||||| ||||||||||||||||||||| ||||| |||||||| 
seq2  TTGATAAATAAG-ATTGCAAAAATTTTAATATTT-ACAGATTTCCACTC-  997

seq1  ACGGGAAAAACAAGCCTCAGCTGAAAAATATGCTTTAAATGTTAAACTCT  1049
      ||||||||||| |||||||||||||||||||||||  |||| ||||||||
seq2  ACGGGAAAAAC-AGCCTCAGCTGAAAAATATGCTT--AATG-TAAACTCT  1043

seq1  TTCAAATGGAGATTAAGATTTAGCTTTAGACTAAAGTATGGAATTTCAAA  1099
      ||| ||||||||||| || ||||| ||||||| |||||||||  ||||||
seq2  TTC-AATGGAGATTAGGA-TTAGC-TTAGACT-AAGTATGGA--TTCAAA  1087

seq1  TGAATACAGAACTTTA  1115
      ||| ||||||||||||
seq2  TGATTACAGAACTTTA  1103


seq1: chr14_91298904_91299715
seq2: B6Ng01-310K02.g_68_882 (reverse)

seq1  GATGATGTAATCTAAGTAGCCTGGGCAGTGGTGGCGCACATCTTTAAT-C  49
      ||||||||| |||||||||||||||||||| ||||||||||||||||| |
seq2  GATGATGTATTCTAAGTAGCCTGGGCAGTGATGGCGCACATCTTTAATCC  50

seq1  CCAGT-ACTTGAGAGGCAGAGGCAGGCAGATTTCTGAGTTTAAGGCTAGC  98
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAACTTGAGAGGCAGAGGCAGGCAGATTTCTGAGTTTAAGGCTAGC  100

seq1  CTGGTCTACAGAGTGAGTTCTAGGACAGCCAGGACTACACAGAGAAATCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGAGTTCTAGGACAGCCAGGACTACACAGAGAAATCA  150

seq1  TTTCTTGAAAAAAAATGTTG-ATATTTATGAATAATCTGAGGCCCTAGAG  197
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTCTTGAAAAAAAATGTTGAATATTTATGAATAATCTGAGGCCCTAGAG  200

seq1  AGATGAATTCCTGGCTAAGAGCTCCTACTACTCTTAGAAAGAAACCATGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATTCCTGGCTAAGAGCTCCTACTACTCTTAGAAAGAAACCATGT  250

seq1  TCCATTCTTGAAACCTATATGAGAGCTCACAACCTCCTATACCATCATTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTTGAAACCTATATGAGAGCTCACAACCTCCTATACCATCATTC  300

seq1  CTAAGGCATCAAACTCCTCATGCATGTGATAAGCATATCACATATCACAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCATCAAACTCCTCATGCATGTGATAAGCATATCACATATCACAT  350

seq1  ACGTAAAATAAATGTAAATCATAAAGGAGAATAATCAGATGTAAATGGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAAATAAATGTAAATCATAAAGGAGAATAATCAGATGTAAATGGTA  400

seq1  TTTGTTAAGACAATTTATCTTGAAAAAGAGAACATTCATCTAAAATAACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAGACAATTTATCTTGAAAAAGAGAACATTCATCTAAAATAACA  450

seq1  AATCTATAATCTCCTTTAAATATATTTGCACACATCTGTGCAACATATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATAATCTCCTTTAAATATATTTGCACACATCTGTGCAACATATTT  500

seq1  ATAAAATAAATAAAAAATATCTAAGGATATATTTATATGTTTGGTGAGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAATAAAAAATATCTAAGGATATATTTATATGTTTGGTGAGGC  550

seq1  CATAACTACAGTGATGAGTATATCGCCAATTGTTTAATTACTGGGCACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTACAGTGATGAGTATATCGCCAATTGTTTAATTACTGGGCACTG  600

seq1  TTAAACATCTAAATAAAAGTCTAAATGGGAGTGTTTTGGTTTTGTGTAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATCTAAATAAAAGTCTAAATGGGAGTGTTTTGGTTTTGTGTAGA  650

seq1  ATACATAGGCTGATGTCATGAATCTAGGTTAGTTATAATACATTGAATTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGGCTGATGTCATGAATCTAGGTTAGTTATAATACATTGAATTA  700

seq1  AATCTTAGTATATGATGAGACTATAAAAATGGATACAAAATGAAGATAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGTATATGATGAGACTATAAAAATGGATACAAAATGAAGATAAA  750

seq1  TTTAATCTAATGGCATGACTTTTTTGAAAACTAAAGCACACAGGCGCCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTAATGGCATGACTTTTTTGAAAACTAAAGCACACAGGCGCCAA  800

seq1  TTAGAACGTGAATTC  812
      |||||||||||||||
seq2  TTAGAACGTGAATTC  815


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