BAC Information

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BAC

Clone NameB6Ng01-313K13
Chromosome14 (Build37)
Map Location 33,069,998 - 33,070,541
singlet/doubletsinglet
Overlap geneParg
Upstream geneBap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23
Downstream geneLOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18, EG622657, Arhgap22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313K13.bB6Ng01-313K13.g
ACCGA104806GA104807
length5381,176
definitionB6Ng01-313K13.b B6Ng01-313K13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acaagagtgaaggagagaaccaactcccaaaagttgtactctaacctgta
cacaaatattgtggcacttgggcactgacacacacacacacacacagaca
aaataaataaacaaatataataaagatgccattatacattaaaacctata
gacttatacaaaagattatatgaccttttctaaaagcatggtatactgtt
aatggctataatcaatgagaggccacttgggttcaaatctctactgcttt
ttatttactagcttgagtaaatcgattaaatgctttctgtatttttattt
tttgtctataaagtggaggttatctgataattaaatgagttaatccaaat
aaagattttagaatagaagttgtattaaaaaatcttagaataaacttatc
tatcagttagactagagtttagccacaaatatttgtgagctcaaaatgtg
gacattagtaaatcttagcaataaacagtacttctaaattgtatggctgt
gtgtatgtgttagtgtatgtgtgtgtatgtgttagtgt
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtggttaagatagggcgga
ttctagaggaaattcaggacaagctatcagaagtaaagcggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttagtagctctgaagcaggtgaagaatcctcctctgagg
aaacagactgggaggaagaagcagcccattaccagccagctaattggtca
agaaaaaagccaaaagcggctggcgaaggccagtttgctgattggcctca
gggcagtcggcttcaaggtccgccctatgcggagtccccgccctgcgtag
tgcgtcagcaatgcgcagagaggcagtgcgcagagaggcagtgcgcagac
tcattcattcccagagaggaacaaaggaaaatacaacaggcatttccggt
ctttgaaggagccgagggtgggcgtgtccacgctccggtagaatacttac
aaattaaaggaaattgccgagtcggttcgtaaatacggaaccaatgctaa
ttttaccttggtgcagttagacaggctcgctggcatggcactaactcctg
ctgactggcaacgggttgtaaaagccgctctccctagtatgggcaattat
atggaatggagagcgcttgggcacgaagctgcacaagcgcagcccgagca
acgcagctgcttgactccagagcagagagattgactttgactgtacgggt
cagagccttattctgctgatcagacaactacatggggagcctatgccgga
tttccttcacgcttatagctggaggccctctcggacaggtaaacacactg
gccaggtttacaaggaaatacatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33069998_33070541
seq2: B6Ng01-313K13.b_46_589

seq1  GAATTCACAAGAGTGAAGGAGAGAACCAACTCCCAAAAGTTGTACTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGAGTGAAGGAGAGAACCAACTCCCAAAAGTTGTACTCTAA  50

seq1  CCTGTACACAAATATTGTGGCACTTGGGCACTGACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACACAAATATTGTGGCACTTGGGCACTGACACACACACACACACA  100

seq1  CAGACAAAATAAATAAACAAATATAATAAAGATGCCATTATACATTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAATAAATAAACAAATATAATAAAGATGCCATTATACATTAAAA  150

seq1  CCTATAGACTTATACAAAAGATTATATGACCTTTTCTAAAAGCATGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGACTTATACAAAAGATTATATGACCTTTTCTAAAAGCATGGTAT  200

seq1  ACTGTTAATGGCTATAATCAATGAGAGGCCACTTGGGTTCAAATCTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAATGGCTATAATCAATGAGAGGCCACTTGGGTTCAAATCTCTAC  250

seq1  TGCTTTTTATTTACTAGCTTGAGTAAATCGATTAAATGCTTTCTGTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTATTTACTAGCTTGAGTAAATCGATTAAATGCTTTCTGTATTT  300

seq1  TTATTTTTTGTCTATAAAGTGGAGGTTATCTGATAATTAAATGAGTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTGTCTATAAAGTGGAGGTTATCTGATAATTAAATGAGTTAAT  350

seq1  CCAAATAAAGATTTTAGAATAGAAGTTGTATTAAAAAATCTTAGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAAGATTTTAGAATAGAAGTTGTATTAAAAAATCTTAGAATAAA  400

seq1  CTTATCTATCAGTTAGACTAGAGTTTAGCCACAAATATTTGTGAGCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTATCAGTTAGACTAGAGTTTAGCCACAAATATTTGTGAGCTCAA  450

seq1  AATGTGGACATTAGTAAATCTCAGCAATAAACAGTACTTCTAAATTGTAT  500
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGTGGACATTAGTAAATCTTAGCAATAAACAGTACTTCTAAATTGTAT  500

seq1  GGCTGTGTGTATGTGTTAGTGTATGTGTGTGTATGTGTTAGTGT  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGTGTATGTGTTAGTGTATGTGTGTGTATGTGTTAGTGT  544