BAC Information

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BAC

Clone NameB6Ng01-314B08
Chromosome14 (Build37)
Map Location 104,584,691 - 104,713,096
singlet/doubletdoublet
Overlap genenone
Upstream genePhr1, LOC100043797, Scel, LOC100043448, Slain1, Ednrb
Downstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314B08.bB6Ng01-314B08.g
ACCGA105122GA105123
length1,0791,059
definitionB6Ng01-314B08.b B6Ng01-314B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,712,017 - 104,713,096)(104,584,691 - 104,585,484)
sequence
gaattctcatcccgtaccagcacagaaaaacttccttcattacgttttca
acctattttccaccttagagataggtaggaaatgtgaatgaatgtgtatt
aagctgtctgtaatatctttattgaagtaccttatgctttaaatacacct
ctgaccctcctgccttcgtcatttacctgtagaacacttatgctaaccac
ttttatttcaggttttgatttttgaaagcaatgcagtatcttaagaattc
acatggtgtttatttaatccttttagaaggaccacatagcagtgaaaatt
ctgtcccgctcttaccatgcagagcagaggagcacttcttcacagtggcc
ttatgacagatggaatgctgctataatttattcaggttcagaacgggcag
tttcatgtatgttcaaagctaacatgtcacaagttccagctaaaatgggt
gtgtcttttttccttgaatgcttcaaaaataaagcatttggaaatttctt
aattagatctaagattttagtcatatagatctggctttgttagtagacca
tagtttcttggcaatagctttatttagtgatgctggattcataccataaa
tatcaacaaaattccaccatgctaacactccagcattttttctttctttt
gaaaaacagaaagcaaggaaatcagaggagatttatagagagtgggccaa
attgaaacctctttggaaacatcttttctgtttccttttaaatgaaggag
cgtgtggatgggtaatgtcaaccttgaagcacacattagaatatatttct
ataaaaacacatcacacagtcagcattcatagagcactctggcttggctc
tggaagcctagcgtgccccagggtcatccttggggaatagactgtatata
aataccaactgccagtagttcacagttagtgccaatgtgaattccctgta
ggtcaaggtaacatgcacacagtgtgacacagcagtagcagctgcattag
tgcagaccccaggatatttcatatttgatgttatttccttctactaagca
tcatgctgttttcagaacagtgggtaaag
gaattcagcattgtctgtgggcaggggtcctgaggtttcccctatctctg
ttatcatttctggtgctgtccttcctcaggtcttgcttaggcaggcatag
tgtagagatgtcactggtgaagatgtcttgctcctagaagacacattctc
acgggtggcttcctggtagtctggctcttacaagcttcctgtcccctctt
ccacaatgttccctgagccttaggtgtagaagtggtctatacatgtattg
tccgaggctgggcactgctaatcatttgttgtctcctctttggccagttg
tggtaatgctctccatctgtcctctttaatgatctccatctgtttcaaag
agaagtttgttggttgagtggatataaggacacatattttaaattcagta
aggaattgtgctcatttagtagactggcagcatttgggtcttctctggga
tctataagctctctattccacctatagttggctgggtttccagaaccagg
cttgattccactcttattgaataggccttaaatacatttaaggttctgtc
actactaaggtgtaagtgtcactatggcacccttaggattatcatgtcat
attagtcatcatggttcatagatgtcatagctgggtagggctattggttg
cttgcatgtcttggaagcttatataataccctttagtacaatgaaagtta
gtcctcaagaagaagaagaaagaagaggctttcaagtcatattcggctag
agtcctctaggtcttgtgaggggaggtgatttttaagaactgcacattgc
aattgctgatgtaaacttatttgttgagatcactaaattcagggttgttt
gggtttgggcttttgttttgttttgttttattttacttttttaatacaca
gttgcatattataacccaggctgggcttggaacatctgttattctcctgg
ctcaatttctaagttctgggattactacatgaactaaaatagaattgtca
ataaaagtgagaactgacgtttacttctttagaaatgtggagccagttga
gagccagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_104712017_104713096
seq2: B6Ng01-314B08.b_44_1122 (reverse)

seq1  CTTTACCCACTG-TCTGAAAACAGCATGATGCTTTAGTAGGAAGGAAATA  49
      |||||||||||| ||||||||||||||||||| |||||| ||||||||||
seq2  CTTTACCCACTGTTCTGAAAACAGCATGATGC-TTAGTA-GAAGGAAATA  48

seq1  ACATCAAATATGAAATATCCTGGGGTCTGCACTAATGCAGCCTGCTACTG  99
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACATCAAATATGAAATATCCTGGGGTCTGCACTAATGCAG-CTGCTACTG  97

seq1  CTGTGTCACACTGTGTGCATGTTACCTTGACCTACA-GGAATTCACATTG  148
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGTGTCACACTGTGTGCATGTTACCTTGACCTACAGGGAATTCACATTG  147

seq1  GCACTAACTGTGAACTACTGGCAGTTGGTATTTATATACAGTCTATTCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAACTGTGAACTACTGGCAGTTGGTATTTATATACAGTCTATTCCC  197

seq1  CAAGGATGACCCTGGGGCACGCTAGGCTTCCAGAGCCAAGCCAGAGTGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGACCCTGGGGCACGCTAGGCTTCCAGAGCCAAGCCAGAGTGCT  247

seq1  CTATGAATGCTGACTGTGTGATGTGTTTTTATAGAAATATATTCTAATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATGCTGACTGTGTGATGTGTTTTTATAGAAATATATTCTAATGT  297

seq1  GTGCTTCAAGGTTGACATTACCCATCCACACGCTCCTTCATTTAAAAGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAAGGTTGACATTACCCATCCACACGCTCCTTCATTTAAAAGGA  347

seq1  AACAGAAAAGATGTTTCCAAAGAGGTTTCAATTTGGCCCACTCTCTATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAAGATGTTTCCAAAGAGGTTTCAATTTGGCCCACTCTCTATAA  397

seq1  ATCTCCTCTGATTTCCTTGCTTTCTGTTTTTCAAAAGAAAGAAAAAATGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCTGATTTCCTTGCTTTCTGTTTTTCAAAAGAAAGAAAAAATGC  447

seq1  TGGAGTGTTAGCATGGTGGAATTTTGTTGATATTTATGGTATGAATCCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTTAGCATGGTGGAATTTTGTTGATATTTATGGTATGAATCCAG  497

seq1  CATCACTAAATAAAGCTATTGCCAAGAAACTATGGTCTACTAACAAAGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTAAATAAAGCTATTGCCAAGAAACTATGGTCTACTAACAAAGCC  547

seq1  AGATCTATATGACTAAAATCTTAGATCTAATTAAGAAATTTCCAAATGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTATATGACTAAAATCTTAGATCTAATTAAGAAATTTCCAAATGCT  597

seq1  TTATTTTTGAAGCATTCAAGGAAAAAAGACACACCCATTTTAGCTGGAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGAAGCATTCAAGGAAAAAAGACACACCCATTTTAGCTGGAAC  647

seq1  TTGTGACATGTTAGCTTTGAACATACATGAAACTGCCCGTTCTGAACCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACATGTTAGCTTTGAACATACATGAAACTGCCCGTTCTGAACCTG  697

seq1  AATAAATTATAGCAGCATTCCATCTGTCATAAGGCCACTGTGAAGAAGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTATAGCAGCATTCCATCTGTCATAAGGCCACTGTGAAGAAGTG  747

seq1  CTCCTCTGCTCTGCATGGTAAGAGCGGGACAGAATTTTCACTGCTATGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGCTCTGCATGGTAAGAGCGGGACAGAATTTTCACTGCTATGTG  797

seq1  GTCCTTCTAAAAGGATTAAATAAACACCATGTGAATTCTTAAGATACTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTAAAAGGATTAAATAAACACCATGTGAATTCTTAAGATACTGC  847

seq1  ATTGCTTTCAAAAATCAAAACCTGAAATAAAAGTGGTTAGCATAAGTGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCAAAAATCAAAACCTGAAATAAAAGTGGTTAGCATAAGTGTT  897

seq1  CTACAGGTAAATGACGAAGGCAGGAGGGTCAGAGGTGTATTTAAAGCATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGTAAATGACGAAGGCAGGAGGGTCAGAGGTGTATTTAAAGCATA  947

seq1  AGGTACTTCAATAAAGATATTACAGACAGCTTAATACACATTCATTCACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTTCAATAAAGATATTACAGACAGCTTAATACACATTCATTCACA  997

seq1  TTTCCTACCTATCTCTAAGGTGGAAAATAGGTTGAAAACGTAATGAAGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTACCTATCTCTAAGGTGGAAAATAGGTTGAAAACGTAATGAAGGA  1047

seq1  AGTTTTTCTGTGCTGGTACGGGATGAGAATTC  1080
      ||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTGTGCTGGTACGGGATGAGAATTC  1079

seq1: chr14_104584691_104585484
seq2: B6Ng01-314B08.g_338_1125

seq1  TCATTTGTTGTCTCCTCTTTGGCCAGTTGTGGTAATGCTCTCCATCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTGTCTCCTCTTTGGCCAGTTGTGGTAATGCTCTCCATCTGTC  50

seq1  CTCTTTAATGATCTCCATCTGTTTCAAAGAGAAGTTTGTTGGTTGAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAATGATCTCCATCTGTTTCAAAGAGAAGTTTGTTGGTTGAGTGG  100

seq1  ATATAAGGACACATATTTTAAATTCAGTAAGGAATTGTGCTCATTTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGACACATATTTTAAATTCAGTAAGGAATTGTGCTCATTTAGTA  150

seq1  GACTGGCAGCATTTGGGTCTTCTCTGGGATCTATAAGCTCTCTATTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCAGCATTTGGGTCTTCTCTGGGATCTATAAGCTCTCTATTCCAC  200

seq1  CTATAGTTGGCTGGGTTTCCAGAACCAGGCTTGATTCCACTCTTATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTGGCTGGGTTTCCAGAACCAGGCTTGATTCCACTCTTATTGAA  250

seq1  TAGGCCTTAAATACATTTAAGGTTCTGTCACTACTAAGGTGTAAGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTTAAATACATTTAAGGTTCTGTCACTACTAAGGTGTAAGTGTCA  300

seq1  CTATGGCACCCTTAGGATTATCATGTCATATTAGTCATCATGGTTCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCACCCTTAGGATTATCATGTCATATTAGTCATCATGGTTCATAG  350

seq1  ATGTCATAGCTGGGTAGGGCTATTGGTTGCTTGCATGTCTTGGAAGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATAGCTGGGTAGGGCTATTGGTTGCTTGCATGTCTTGGAAGCTTA  400

seq1  TATAATACCCTTTAGTACAATGAAAGTTAGTCCTCAAGAAGAAGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACCCTTTAGTACAATGAAAGTTAGTCCTCAAGAAGAAGAAGAAA  450

seq1  GAAGAGGCTTTCAAGTCATATTCGGCTAGAGTCCTCTAGGTCTTGTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCTTTCAAGTCATATTCGGCTAGAGTCCTCTAGGTCTTGTGAGG  500

seq1  GGAGGTGATTTTTAAGAACTGCACATTGCAATTGCTGATGTAAACTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGATTTTTAAGAACTGCACATTGCAATTGCTGATGTAAACTTATT  550

seq1  TGTTGAGATCACTAAATTCAGGGTTGTTTGGGTTTGGGCTTTTTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTTGAGATCACTAAATTCAGGGTTGTTTGGGTTTGGGC-TTTTGTTTTG  599

seq1  TTTTGTTTTATTTTACTTTTTAAATACACAGTTGCATATTATAACCCAGG  650
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTGTTTTATTTTACTTTTTTAATACACAGTTGCATATTATAACCCAGG  649

seq1  CT-GGCTTGGAACATCTGTTAATTCTCCTGGCTCAATTTTCTAAGTTCTG  699
      || ||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  CTGGGCTTGGAACATCTGTT-ATTCTCCTGGCTCAA-TTTCTAAGTTCTG  697

seq1  GGATTACTTACAATGAACT-AAATAGAATTTGTCAATAAAAGTGAGAACT  748
      ||||||| ||| ||||||| |||||||| |||||||||||||||||||||
seq2  GGATTAC-TAC-ATGAACTAAAATAGAA-TTGTCAATAAAAGTGAGAACT  744

seq1  GAACGTTACTTCTTTTAAGAAAATGTGGAG-CAGTTGAAGAG-CAGAC  794
      ||   ||||||||||  || |||||||||| |||||| |||| |||||
seq2  GACGTTTACTTCTTT--AG-AAATGTGGAGCCAGTTG-AGAGCCAGAC  788