BAC Information

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BAC

Clone NameB6Ng01-314G24
Chromosome14 (Build37)
Map Location 103,674,201 - 103,675,243
singlet/doubletsinglet
Overlap genePhr1
Upstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441
Downstream geneLOC100043797, Scel, LOC100043448, Slain1, Ednrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314G24.b
ACCGA105374
length1,053
definitionB6Ng01-314G24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcaataaaattttaagtttaaggtggttttctgctagctttt
acttattcatatttgtataggtacagctattatatactcaaattatatga
tatatgttattttcattattttggccaattattcagctgtccctgtaccg
ggggttaatattgaggaacatcttcagttaagacaagaagaaaaacggca
acgtgtcattagaagacacagattagaagatggaagaggtaagataacta
cagagaaaaagtatagggaaacttgcatactttaactgaggcaagtgaaa
tatttatagaatatcctcatttagtaagaagtattaaagtttacaacatt
cttgtagcaagtgaagttacgtgaacatatttacagcatttataattatg
ttagtaataacacatttagttcagtagagtactcctcaactgcagtaaag
tgtgtgctgggtagctcagcatgatggctcatacttataatttcagcatc
ctgatgttaacacaggattgctacaaattccaagcctgtctgcagtgaga
ctgttacaaaaaaagataaaaggatgtaccactggaaaatgtaaatgcca
ttgccaatgacaattacagatcgtatcaatcctgtcttcagattttgggt
caaatacagatatttgaccataggtccatatttagtttaacctaggctgt
tcaggtctgttttcatagctgatcacgtcattgccatttggtataatatc
attatgctgtccagccatccagtgcatgattgtgacatttttatgtcttt
ctttttctttctttcttttttttttttaatacaaaaagattattttacaa
aagggaattgaaagtcatgttttatttgcaaagacagatgtattgcttat
attaatttccttattgtttaggacagtttctaacctgaaaatatatttaa
tactaattgtacaataatgacattttgaaatgtatgaattaagaccggaa
ataaatattatggttactatattgttttttccaacaaaaacctacttttg
tac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103674201_103675243
seq2: B6Ng01-314G24.b_43_1095 (reverse)

seq1  GTACAAA--GAGG-TTTTGTTGGAAAACA-ATTTTAGTAA-CATAATATT  45
      |||||||   ||| ||||||||||||| | | | |||||| |||||||||
seq2  GTACAAAAGTAGGTTTTTGTTGGAAAAAACAATATAGTAACCATAATATT  50

seq1  TATTT-CTGTCTT-ATTCATACATTTTAAAATGTCATTTATGTACAATTA  93
      ||||| | ||||| |||||||||||| |||||||||||  ||||||||||
seq2  TATTTCCGGTCTTAATTCATACATTTCAAAATGTCATTATTGTACAATTA  100

seq1  GTATTAAATATATTTTCAGGTTAAGAAACTGTCCTAAACAATAAGGAAA-  142
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  GTATTAAATATATTTTCAGGTT-AGAAACTGTCCTAAACAATAAGGAAAT  149

seq1  TAATATAAGCAATACATCTGTCTTTGCAAAT-AAACATGACTTTCAATTC  191
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAATATAAGCAATACATCTGTCTTTGCAAATAAAACATGACTTTCAATTC  199

seq1  CTTTTTGT-AAATAATCTTTTTGTATT-AAAAAAAAAAAGAAAGAAAGAA  239
      | |||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  CCTTTTGTAAAATAATCTTTTTGTATTAAAAAAAAAAAAGAAAGAAAGAA  249

seq1  AAAGAAAGACATAAAAATGTCACAATCATGCACTGGATGGCTGGACAGCA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGACATAAAAATGTCACAATCATGCACTGGATGGCTGGACAGCA  299

seq1  TAATGATATTATACCAAATGGCAATGACGTGATCAGCTATGAAAACAGAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATATTATACCAAATGGCAATGACGTGATCAGCTATGAAAACAGAC  349

seq1  CTGAACAGCCTAGGTTAAACTAAATATGGACCTATGGTCAAATATCTGTA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAGCCTAGGTTAAACTAAATATGGACCTATGGTCAAATATCTGTA  399

seq1  TTTGACCCAAAATCTGAAGACAGGATTGATACGATCTGTAATTGTCATTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCCAAAATCTGAAGACAGGATTGATACGATCTGTAATTGTCATTG  449

seq1  GCAATGGCATTTACATTTTCCAGTGGTACATCCTTTTATCTTTTTTTGTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCATTTACATTTTCCAGTGGTACATCCTTTTATCTTTTTTTGTA  499

seq1  ACAGTCTCACTGCAGACAGGCTTGGAATTTGTAGCAATCCTGTGTTAACA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTCACTGCAGACAGGCTTGGAATTTGTAGCAATCCTGTGTTAACA  549

seq1  TCAGGATGCTGAAATTATAAGTATGAGCCATCATGCTGAGCTACCCAGCA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGCTGAAATTATAAGTATGAGCCATCATGCTGAGCTACCCAGCA  599

seq1  CACACTTTACTGCAGTTGAGGAGTACTCTACTGAACTAAATGTGTTATTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTACTGCAGTTGAGGAGTACTCTACTGAACTAAATGTGTTATTA  649

seq1  CTAACATAATTATAAATGCTGTAAATATGTTCACGTAACTTCACTTGCTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAATTATAAATGCTGTAAATATGTTCACGTAACTTCACTTGCTA  699

seq1  CAAGAATGTTGTAAACTTTAATACTTCTTACTAAATGAGGATATTCTATA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGTTGTAAACTTTAATACTTCTTACTAAATGAGGATATTCTATA  749

seq1  AATATTTCACTTGCCTCAGTTAAAGTATGCAAGTTTCCCTATACTTTTTC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCACTTGCCTCAGTTAAAGTATGCAAGTTTCCCTATACTTTTTC  799

seq1  TCTGTAGTTATCTTACCTCTTCCATCTTCTAATCTGTGTCTTCTAATGAC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTTATCTTACCTCTTCCATCTTCTAATCTGTGTCTTCTAATGAC  849

seq1  ACGTTGCCGTTTTTCTTCTTGTCTTAACTGAAGATGTTCCTCAATATTAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGCCGTTTTTCTTCTTGTCTTAACTGAAGATGTTCCTCAATATTAA  899

seq1  CCCCCGGTACAGGGACAGCTGAATAATTGGCCAAAATAATGAAAATAACA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGGTACAGGGACAGCTGAATAATTGGCCAAAATAATGAAAATAACA  949

seq1  TATATCATATAATTTGAGTATATAATAGCTGTACCTATACAAATATGAAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATATAATTTGAGTATATAATAGCTGTACCTATACAAATATGAAT  999

seq1  AAGTAAAAGCTAGCAGAAAACCACCTTAAACTTAAAATTTTATTGCAAGA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGCTAGCAGAAAACCACCTTAAACTTAAAATTTTATTGCAAGA  1049

seq1  ATTC  1043
      ||||
seq2  ATTC  1053