BAC Information

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BAC

Clone NameB6Ng01-314O05
Chromosome14 (Build37)
Map Location 106,907,886 - 107,055,480
singlet/doubletdoublet
Overlap geneLOC668748
Upstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742
Downstream geneLOC668752
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314O05.bB6Ng01-314O05.g
ACCGA105683GA105684
length1,1041,089
definitionB6Ng01-314O05.b B6Ng01-314O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,054,363 - 107,055,480)(106,907,886 - 106,908,977)
sequence
gaattcagtattttactagcagcctttggatgaagatgttgaactctcag
ctctgcctgcaccatgcctgcctagatgctgccatgctgcctccttgatg
ataatggactgaacctctgaacctgtaagccaatctcaattaaatgttgt
tttttataagacttatcttggtcatggtatctgtccacagcagtaaaacc
ctgactaatacaattattatcattattattactgttattattacttatat
tgaaagactctagtttccaagaagcttcaaccagaacacttcattttaat
tatgctttccactggaccttcatttcctgttctgcatcatttgactatcg
tttcaaattattccactcctcagtgtttttattactaattgaatttttat
tgggaaaacagaaagtctattttcctacaaataataaaaaactgcaattt
acatattctcagaaatagtctaatattttatactaaaatattactaatat
aattaatcttaaattaaaattctggtactcatgtttttatgtaccaatcc
atgtatttagtaatccaatagtaaattacccactgatatacaaatcttgt
taaaaatgattttgtggtcaaataatgcatgttaataagtacatttttga
tagaataaaatcaaaaatagttggaaataagctagaattttgctgactac
atagtacagaagacacatgcaccaattttctgttttgctacaaacaaacc
atctgtattacattttaataaggacatttcattaataataacattcatta
aaagtgtttttcatatattactacattctattagagtaatatccttttaa
aaggtatcacaaattacagagagcaaacagaaaaaaactacccctgaaaa
gctaagcttgatatataattatgatttttaaaattacagagttctctctt
tttcctaattttaaaagaggctcgaggacttcaagtgtcactattgcctg
gggaatacctgaccttgccctcataggcctgactagcatagctgtctttg
ctagaggactgttcttcgatgagaagtgtacgatgaatcaaatctttaac
tctc
gaattccatctattcctggtaaaggccataatttactgataggttcctga
atagctcacatttctctgattcctgatgatcatgaaaattgttgaacaca
gattcataggcgttccatatgaatgcaagtgattgtgaaaatctgttgat
tacagagcagactccattactgtatccacctttgtgcactcagaattcag
agcttgtgattatgtcttggtactttctgaaaaaaaaaaaagaaaaaaga
aaaaagaaagaaaagaaaatcatttgctctactggggatctgattttcct
tcagttagactatttgaacaatttgctaaatttacaccaaattgtaagga
attgaattctatagcaccaaaaatgattttaggaaaagttagaaagtgat
tgaaaatgtgcaaggtgttatttatttgtcctttgccctgaagtcatatc
atgggtcttttatttttaatctttagattatcatatataaatcattttca
aggcaacagtttccttcctactaaatttgaactagaggcagtgaggtaga
ggtgaactttcattctgagatcattcccataatgacaggcagtatacaga
ttcttaacaattatggctctcaatacaaatatgaggaaccctgaaatgag
aaaataattagaataatttcacaaacataagtaaccttacgtgctggact
agaagagaaaaggcatctgcatactattgctctagtgatcatgaatgcag
tagattatttttagtgattgtgacttatatatacttatttgaaaatgttt
gtcaggttcattatgttttttttatatcctttcacagagacatattaaaa
tttgtgaaaattatataaaaagatgaaaatactctgctgtgctaaagatg
agattccccagagatatttcagagaattatgctcaaaatgtcttttatat
ttttagatataaaaatgggaataaatccattagagcagggtatactaaaa
tagtgcttttagcatttgtaaatatttttagcatgttttccagacctgct
catacaacttgttttgaatccataaatacttatccgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107054363_107055480
seq2: B6Ng01-314O05.b_46_1149 (reverse)

seq1  GAGAG-TAAAGATTTGATTCATACGGTCACTCTTCATCGAAAGGACAGTC  49
      ||||| |||||||||||||||| ||  ||||  |||||| ||| ||||||
seq2  GAGAGTTAAAGATTTGATTCAT-CGTACACTTCTCATCG-AAGAACAGTC  48

seq1  CTCTAGCAAAGGACAGGCCTATGCTAGTCAGGCCTATGAGGCAAAGGTCC  99
      |||||||||| |||||  |||||||||||||||||||||||  ||||| |
seq2  CTCTAGCAAA-GACAG--CTATGCTAGTCAGGCCTATGAGGGCAAGGT-C  94

seq1  AGGTATTCCCCAGGCAATAGTTGAACACTTGAAGTTCCTTCGAGCCTCTT  149
      |||||||||||||||||||||   |||||||||||  | |||||||||||
seq2  AGGTATTCCCCAGGCAATAGT--GACACTTGAAGT--CCTCGAGCCTCTT  140

seq1  TTAAAATTAGGAAAAA-AGAGAAGAAACTTCTGTAATTTTAAAAATCATA  198
      |||||||||||||||| ||||||      |||||||||||||||||||||
seq2  TTAAAATTAGGAAAAAGAGAGAA-----CTCTGTAATTTTAAAAATCATA  185

seq1  ATTATATTATCAAGCTTAGCTTTTCAGGGGTAGTTTTTTTCTGTTTGCTC  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATA-TATCAAGCTTAGCTTTTCAGGGGTAGTTTTTTTCTGTTTGCTC  234

seq1  TCTGTAATTTGTGATACCTTTTAAAAGGATATTACTCTAATAGAATGTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTTGTGATACCTTTTAAAAGGATATTACTCTAATAGAATGTAG  284

seq1  TAATATATGAAAAACACTTTTAATGAATGTTATTATTAATGAAATGTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATGAAAAACACTTTTAATGAATGTTATTATTAATGAAATGTCCT  334

seq1  TATTAAAATGTAATACAGATGGTTTGTTTGTAGCAAAACAGAAAATTGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATGTAATACAGATGGTTTGTTTGTAGCAAAACAGAAAATTGGT  384

seq1  GCATGTGTCTTCTGTACTATGTAGTCAGCAAAATTCTAGCTTATTTCCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTCTTCTGTACTATGTAGTCAGCAAAATTCTAGCTTATTTCCAA  434

seq1  CTATTTTTGATTTTATTCTATCAAAAATGTACTTATTAACATGCATTATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTGATTTTATTCTATCAAAAATGTACTTATTAACATGCATTATT  484

seq1  TGACCACAAAATCATTTTTAACAAGATTTGTATATCAGTGGGTAATTTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACAAAATCATTTTTAACAAGATTTGTATATCAGTGGGTAATTTAC  534

seq1  TATTGGATTACTAAATACATGGATTGGTACATAAAAACATGAGTACCAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATTACTAAATACATGGATTGGTACATAAAAACATGAGTACCAGA  584

seq1  ATTTTAATTTAAGATTAATTATATTAGTAATATTTTAGTATAAAATATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTAAGATTAATTATATTAGTAATATTTTAGTATAAAATATTA  634

seq1  GACTATTTCTGAGAATATGTAAATTGCAGTTTTTTATTATTTGTAGGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTTCTGAGAATATGTAAATTGCAGTTTTTTATTATTTGTAGGAAA  684

seq1  ATAGACTTTCTGTTTTCCCAATAAAAATTCAATTAGTAATAAAAACACTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTTTCTGTTTTCCCAATAAAAATTCAATTAGTAATAAAAACACTG  734

seq1  AGGAGTGGAATAATTTGAAACGATAGTCAAATGATGCAGAACAGGAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGAATAATTTGAAACGATAGTCAAATGATGCAGAACAGGAAATG  784

seq1  AAGGTCCAGTGGAAAGCATAATTAAAATGAAGTGTTCTGGTTGAAGCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCAGTGGAAAGCATAATTAAAATGAAGTGTTCTGGTTGAAGCTTC  834

seq1  TTGGAAACTAGAGTCTTTCAATATAAGTAATAATAACAGTAATAATAATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACTAGAGTCTTTCAATATAAGTAATAATAACAGTAATAATAATG  884

seq1  ATAATAATTGTATTAGTCAGGGTTTTACTGCTGTGGACAGATACCATGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTGTATTAGTCAGGGTTTTACTGCTGTGGACAGATACCATGAC  934

seq1  CAAGATAAGTCTTATAAAAAACAACATTTAATTGAGATTGGCTTACAGGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAAGTCTTATAAAAAACAACATTTAATTGAGATTGGCTTACAGGT  984

seq1  TCAGAGGTTCAGTCCATTATCATCAAGGAGGCAGCATGGCAGCATCTAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTTCAGTCCATTATCATCAAGGAGGCAGCATGGCAGCATCTAGG  1034

seq1  CAGGCATGGTGCAGGCAGAGCTGAGAGTTCAACATCTTCATCCAAAGGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGTGCAGGCAGAGCTGAGAGTTCAACATCTTCATCCAAAGGCT  1084

seq1  GCTAGTAAAATACTGAATTC  1118
      ||||||||||||||||||||
seq2  GCTAGTAAAATACTGAATTC  1104

seq1: chr14_106907886_106908977
seq2: B6Ng01-314O05.g_66_1154

seq1  GAATTCCATCTATTCCTGGTAAAGGCCATAATTTACTGATAGGTTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTATTCCTGGTAAAGGCCATAATTTACTGATAGGTTCCTGA  50

seq1  ATAGCTCACATTTCTCTGATTCCTGATGATCATGAAAATTGTTGAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCACATTTCTCTGATTCCTGATGATCATGAAAATTGTTGAACACA  100

seq1  GATTCATAGGCGTTCCATATGAATGCAAGTGATTGTGAAAATCTGTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATAGGCGTTCCATATGAATGCAAGTGATTGTGAAAATCTGTTGAT  150

seq1  TACAGAGCAGACTCCATTACTGTATCCACCTTTGTGCACTCAGAATTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCAGACTCCATTACTGTATCCACCTTTGTGCACTCAGAATTCAG  200

seq1  AGCTTGTGATTATGTCTTGGTACTTTCTGAAAAAAAAAAAAGAAAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTGATTATGTCTTGGTACTTTCTGAAAAAAAAAAAAGAAAAAAGA  250

seq1  AAAAAGAAAGAAAAGAAAATCATTTGCTCTACTGGGGATCTGATTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGAAAAGAAAATCATTTGCTCTACTGGGGATCTGATTTTCCT  300

seq1  TCAGTTAGACTATTTGAACAATTTGCTAAATTTACACCAAATTGTAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAGACTATTTGAACAATTTGCTAAATTTACACCAAATTGTAAGGA  350

seq1  ATTGAATTCTATAGCACCAAAAATGATTTTAGGAAAAGTTAGAAAGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTCTATAGCACCAAAAATGATTTTAGGAAAAGTTAGAAAGTGAT  400

seq1  TGAAAATGTGCAAGGTGTTATTTATTTGTCCTTTGCCCTGAAGTCATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGTGCAAGGTGTTATTTATTTGTCCTTTGCCCTGAAGTCATATC  450

seq1  ATGGGTCTTTTATTTTTAATCTTTAGATTATCATATATAAATCATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCTTTTATTTTTAATCTTTAGATTATCATATATAAATCATTTTCA  500

seq1  AGGCAACAGTTTCCTTCCTACTAAATTTGAACTAGAGGCAGTGAGGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAGTTTCCTTCCTACTAAATTTGAACTAGAGGCAGTGAGGTAGA  550

seq1  GGTGAACTTTCATTCTGAGATCATTCCCATAATGACAGGCAGTATACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACTTTCATTCTGAGATCATTCCCATAATGACAGGCAGTATACAGA  600

seq1  TTCTTAACAATTATGGCTCTCAATACAAATATGAGGAACCCTGAAATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAACAATTATGGCTCTCAATACAAATATGAGGAACCCTGAAATGAG  650

seq1  AAAATAATTAGAATAATTTCACAAACATAAGTAACCTTACGTGCTGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTAGAATAATTTCACAAACATAAGTAACCTTACGTGCTGGACT  700

seq1  AGAAGAGAAAAGGCATCTGCATACTATTGCTCTAGTGATCATGAATGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAAAGGCATCTGCATACTATTGCTCTAGTGATCATGAATGCAG  750

seq1  TAGATTATTTTTAGTGATTGTGACTTATATATACTTATTTGAAAATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATTTTTAGTGATTGTGACTTATATATACTTATTTGAAAATGTTT  800

seq1  GTCAGGTTCATTATG-TTTTTTTATATCCTTTCACAGAGACATATTAAAA  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCAGGTTCATTATGTTTTTTTTATATCCTTTCACAGAGACATATTAAAA  850

seq1  TTTGTGAAAATTATATAAAAAGATGAAAATACTCTGCTGTGCTAAAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAAATTATATAAAAAGATGAAAATACTCTGCTGTGCTAAAGATG  900

seq1  AGATTCCCCAGAGATATTTCAGAGAAATTATGCTCAAAATGTC-TTTATA  948
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  AGATTCCCCAGAGATATTTCAGAG-AATTATGCTCAAAATGTCTTTTATA  949

seq1  -TTTTAGATAT-AAAATGGGAATAAAATCCATTAGGAAGCCAGGTATACT  996
       |||||||||| ||||||||||| |||||||||||  |||  ||||||||
seq2  TTTTTAGATATAAAAATGGGAAT-AAATCCATTAG--AGCAGGGTATACT  996

seq1  AAAATAGTGCTTTTAAGCATTTGTAAATATTTTAAGGCAATGTTT--CAG  1044
      |||||||||||||| |||||||||||||||||| ||   ||||||  |||
seq2  AAAATAGTGCTTTT-AGCATTTGTAAATATTTTTAG--CATGTTTTCCAG  1043

seq1  AACTGCTCCATACAACTTGTTTTAAAATCATAAAATACTTATCAGAGA  1092
      | ||||| ||||||||||||||| ||  ||| ||||||||||| ||||
seq2  ACCTGCT-CATACAACTTGTTTTGAATCCAT-AAATACTTATCCGAGA  1089