BAC Information

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BAC

Clone NameB6Ng01-315A07
Chromosome14 (Build37)
Map Location 16,763,469 - 16,764,585
singlet/doubletsinglet
Overlap genenone
Upstream geneNek10, Lrrc3b, LOC667205
Downstream gene1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315A07.bB6Ng01-315A07.g
ACCGA105781GA105782
length1,1591,103
definitionB6Ng01-315A07.b B6Ng01-315A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaatttgcgattatctatgcatatacaactcaaggtaagaaa
aaatactgttcctttaaaggactgtctttggacatttaagaactcattct
aaattgcctggatcagacctcttaaggcgactccattctagatttatatc
tcaagcagattataagccttacacaagaataattggccatataatttcat
tctttacatcatcaaaatagtaatggcttgagataattatttggtatttt
tagagaatgttcatgtgaaattataaattgtcctcagtttctacctgttc
cacataatggtgttaattcttgaggacttatacttaatcaattattacaa
aaggatactcatatttctgatttaaaaaaataaaatatgcacaggtgact
gttgataccttttcaggctttctaattgcaactcctctaacaagagaaac
aactaaaagtgtaattagtcattgcctatgttaatttttttatgcttggt
gttccaaatcagattaaaacagatattggaactggctattacagtcaagt
atttgagatgtattgtcaacaatttaatgttacccatgttactgagatgt
ttttaattctcaaggacaaggtattgtggaactttagaaactatatcttc
tttaaaaaacaaaggggaggaattatatccctgtgtacattatttaaatc
acactttttatttttaaaattttaaaatattggatgccaaagaactcctt
gctgagtgccttatattatcttaaaactagacatactcatgctgaaagac
ccacaacgtgaggactcccccacgttctgactcaggagaggcgacacccc
aaaatcaccaatgagaaacggtcttgctgcaaattgcaagaggattttta
ttcaagagcgctctcgggcccatggtcatacaccacgcagggtagaggac
cgtggcgccccgagtagctggattagggggattaaagagaaacacactta
agagtgggaggcgtgtggaaaataccaaaaaataacagtaagagtcacaa
cgagaacaaagttcacagtgtcaagtaatcctctcaagaacaggttccta
gagtcctacatcttagagcttagcatagacctgccaatggttccagcatg
gtcaaggtg

gaattcacacatcaaaaagtcatccaccttgatcaaatgggcttcatccc
gggaatacagagatgcttcaatatatggaaacccatcaacataatccaat
atataaaaaaactcatatcttttgtcagtcagcttgctattcatttttga
gaggaaaaactgtgagaaatagaaaggtaaagtaactttgctgaaattta
catgctagccaaatattttccatcatctacataactgatattccatcatc
catatctctgatatttgagatctgcaaggtgggacaggcacagtgtaagt
ttatgacggtcaccaccataagtcagtagaaggagtctgccctggtcctg
accttaatcctgcctgagattaatttctgtactgccttgtacctttgtct
ccagaacaagagtagctgttgcttcctagatctgtcactttgatgtcctc
ctcccagttccacaacccagttaaagcatgtcttgctctaaaccatctct
tatcgattgactgatggttggttgattttctgtaagggaaatgcacagaa
gccacctcttaaccctagatgatgctctgtggccaaagagccctagcaac
ctgcctgtcttagccttcctgccactggaactaaagaggcttctccaggc
acagcttttatacatgttgccatgtgttgaattcatattaccatgtttgc
acagcaagtactttagtagctgagccatctacccagccattcccttctgt
ttaaatatgcaaagtgaaatttcccttgtctgactcaaactgactgcaat
tgacacagggtatgaccaagaaattttagcagtcaaagctttataaattc
cagggatagtactttcaactggacaaatataagtgactatcaacattatt
ttttacaaattttgttcccttaaatatgtagatattctgttgcctttaca
cttaactttcatccttaattctgcatctcattattttacccaagagaact
cagagctcgtgtctgacactctcaagccactcacacacatcactcaggtt
actatatgagatctcacttgacatgttggctaacatgaagttatagtgct
ccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16763469_16764585
seq2: B6Ng01-315A07.g_66_1168

seq1  GAATTCACACATCAAAAAGTCATCCACCTTGATCAAATGGGCTTCATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATCAAAAAGTCATCCACCTTGATCAAATGGGCTTCATCCC  50

seq1  GGGAATACAGAGATGCTTCAATATATGGAAACCCATCAACATAATCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATACAGAGATGCTTCAATATATGGAAACCCATCAACATAATCCAAT  100

seq1  ATATAAAAAAACTCATATCTTTTGTCAGTCAGCTTGCTATTCATTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAAAACTCATATCTTTTGTCAGTCAGCTTGCTATTCATTTTTGA  150

seq1  GAGGAAAAACTGTGAGAAATAGAAAGGTAAAGTAACTTTGCTGAAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAACTGTGAGAAATAGAAAGGTAAAGTAACTTTGCTGAAATTTA  200

seq1  CATGCTAGCCAAATATTTTCCATCATCTACATAACTGATATTCCATCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGCCAAATATTTTCCATCATCTACATAACTGATATTCCATCATC  250

seq1  CATATCTCTGATATTTGAGATCTGCAAGGTGGGACAGGCACAGTGTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCTGATATTTGAGATCTGCAAGGTGGGACAGGCACAGTGTAAGT  300

seq1  TTATGACGGTCACCACCATAAGTCAGTAGAAGGAGTCTGCCCTGGTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACGGTCACCACCATAAGTCAGTAGAAGGAGTCTGCCCTGGTCCTG  350

seq1  ACCTTAATCCTGCCTGAGATTAATTTCTGTACTGCCTTGTACCTTTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATCCTGCCTGAGATTAATTTCTGTACTGCCTTGTACCTTTGTCT  400

seq1  CCAGAACAAGAGTAGCTGTTGCTTCCTAGATCTGTCACTTTGATGTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACAAGAGTAGCTGTTGCTTCCTAGATCTGTCACTTTGATGTCCTC  450

seq1  CTCCCAGTTCCACAACCCAGTTAAAGCATGTCTTGCTCTAAACCATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGTTCCACAACCCAGTTAAAGCATGTCTTGCTCTAAACCATCTCT  500

seq1  TATCGATTGACTGATGGTTGGTTGATTTTCTGTAAGGGAAATGCACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGATTGACTGATGGTTGGTTGATTTTCTGTAAGGGAAATGCACAGAA  550

seq1  GCCACCTCTTAACCCTAGATGATGCTCTGTGGCCAAAGAGCCCTAGCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCTTAACCCTAGATGATGCTCTGTGGCCAAAGAGCCCTAGCAAC  600

seq1  CTGCCTGTCTTAGCCTTCCTGCCACTGGAACTAAAGAGGCTTCTCCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTCTTAGCCTTCCTGCCACTGGAACTAAAGAGGCTTCTCCAGGC  650

seq1  ACAGCTTTTATACATGTTGCCATGTGTTGAATTCATATTACCATGTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTATACATGTTGCCATGTGTTGAATTCATATTACCATGTTTGC  700

seq1  ACAGCAAGTACTTTAGTAGCTGAGCCATCTACCCAGCCATTCCCTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGTACTTTAGTAGCTGAGCCATCTACCCAGCCATTCCCTTCTGT  750

seq1  TTAAATATGCAAAGTGAAATTTCCCTTGTCTGACTCAAACTGACTGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATGCAAAGTGAAATTTCCCTTGTCTGACTCAAACTGACTGCAAT  800

seq1  TGACACAGGGTATGACCAAGAAATTTTAGCAGTCAAAGCTTTATAAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGGGTATGACCAAGAAATTTTAGCAGTCAAAGCTTTATAAATTC  850

seq1  CAGGGATAGTACTTTCAACTGGACAAATATAAGTGACTATCAACATTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATAGTACTTTCAACTGGACAAATATAAGTGACTATCAACATTATT  900

seq1  TTTTACAAATTTTGTTCCCTTAAATATGTAGATATTCTGTTGCCTTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAATTTTGTTCCCTTAAATATGTAGATATTCTGTTGCCTTTACA  950

seq1  CTTAACTTTCATCCTTAAATTCTGCAATCTTCATTATTTTACCCAAGAGA  1000
      |||||||||||||||| |||||||| ||| ||||||||||||||||||||
seq2  CTTAACTTTCATCCTT-AATTCTGC-ATC-TCATTATTTTACCCAAGAGA  997

seq1  ACTCAGAGCCTCGGTGTCTGACACTCTCAAAGCCAACTCACACACATCAA  1050
      |||||||| ||| ||||||||||||||| ||||| ||||||||||||| |
seq2  ACTCAGAG-CTC-GTGTCTGACACTCTC-AAGCC-ACTCACACACATC-A  1042

seq1  CTCCAGGTTTACTATATGAGATCCTCAACTTGACATGTTGGCTAACATGG  1100
      || |||| |||||||||||||| ||| ||||||||||||||||||||| |
seq2  CT-CAGG-TTACTATATGAGAT-CTC-ACTTGACATGTTGGCTAACAT-G  1087

seq1  AGGTTATAGTTGCTCCC  1117
      | ||||||| |||||||
seq2  AAGTTATAG-TGCTCCC  1103


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