BAC Information

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BAC

Clone NameB6Ng01-315N02
Chromosome14 (Build37)
Map Location 11,687,774 - 11,688,923
singlet/doubletsinglet
Overlap geneFhit
Upstream geneLOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996, Ptprg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315N02.bB6Ng01-315N02.g
ACCGA106367GA106368
length1,1991,132
definitionB6Ng01-315N02.b B6Ng01-315N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaagaaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttttggtggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaatcgatccatacttat
ctccttgtactaaggtcaatctaagtggatcaggacttcacataaaacca
gagaacactgaaacgtaatagaggagaagtggggaaagcttgaagaatat
tggcacaggtaaaaatctgaacagaaacagcaatggctggcctgtaagat
tcggaaatggacaaatgggcacctaatggaactctcaaagcgtttctcg
gaattctcttgctctcaggcttgctaccccacaccaacccttagtccttc
tgcttctgatacaaagaggtcatcttctatgtgtggattttatcttctgc
atcagtatgttctcgaacatgactttagctcagaataattcttatgttac
agtggcatactatgatgtagcatgttctgatgccctttaacgatcctgtt
ttgggcattcaaggcaatgtggctgtctttgctctggagcaattcccaaa
gtcctactacatcagtgaaactgcatataccattaggggttggtccacca
tagtatcaagtatcccatgggagactgcacaattctgttttcttctcccc
gttttcatggtgtgttgagatcctgatttgtggccatgagtcagttgcct
tgtgtgacatgggtagataaaaccagaatcttatttacaccattcaagcc
gaccgcattgtttatttatatgaaagggccctatagtgcttattacagaa
gaccaaacctatcacccatgacttttgaccccacttctatcatcttgcaa
gtctttcaggcttggtgtggtgaggcatgcctagaagctcagtgcacagg
ttatggtggcagaaggaatgctgtattttgaagctagccttggttacaca
gagagcctcatgccagccaggctaaataacaagacactgttgcaaacaaa
aataacaacaaaccccacactcttcagctagatgtcaatgtcatgctcat
gtaatggagtgatggaggtccttggacatcagcagatgtgtgttttcatt
cttgttttaatggtgggaagctgagtgctgtcaagcaagagaattggcac
tcctggaattctttattcacttctttagttcttttacatctcatctgtct
ttgtgtttaggtcctcaatgccttcctcagtatccaccagaatagtagac
cttttccagctgtagtgtttatagcatagacagacaaaaattcagaaaga
tgaaatatcatagcataaccactcagaagactctctacgcattgttttat
ttgctgtgctttggcttcagatggttgagtctcaatcacagaatggcctt
gagatcctaacctttttggcccttctattcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11687774_11688923
seq2: B6Ng01-315N02.g_64_1195 (reverse)

seq1  CTGAATAGAAGGGGAAAAAAGGTGTTAGGATCCTCAAGAGCAATCTGTGA  50
      |||||||||||||  ||||||  |||||||| ||||||  || |||||| 
seq2  CTGAATAGAAGGGCCAAAAAG--GTTAGGAT-CTCAAGGCCATTCTGTG-  46

seq1  ATTGAGACTCAACTCATCTGAAAGGCAAAAGCACAGGCAAATAAAACATG  100
      ||||||||||||| ||||||||  || |||||||| ||||||||||||  
seq2  ATTGAGACTCAAC-CATCTGAA--GCCAAAGCACA-GCAAATAAAACAAT  92

seq1  CCTTAAGGAGAGTTCTTCTGAGTTGTTTAATGCTATGGATATTTTCATTC  150
       | ||  ||||| |||||||||| |||  ||||||| |||| ||||||  
seq2  GCGTA--GAGAG-TCTTCTGAGTGGTT--ATGCTAT-GATA-TTTCAT--  133

seq1  CTTTCTGAA-TTTTGTCTGTCTATTGCTATAAACACTACAGCCTGGAAAA  199
      ||||||||| ||||||||||||| ||||||||||||||||| ||||||||
seq2  CTTTCTGAATTTTTGTCTGTCTA-TGCTATAAACACTACAG-CTGGAAAA  181

seq1  GGTCTACTATTCTGGTGGATACTGAGGAAGGCATTGAGGACCTAAACACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACTATTCTGGTGGATACTGAGGAAGGCATTGAGGACCTAAACACA  231

seq1  AAGACAGATGAGATGTAAAAGAACTAAAGAAGTGAATAAAGAATTCCAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATGAGATGTAAAAGAACTAAAGAAGTGAATAAAGAATTCCAGG  281

seq1  AGTGCCAATTCTCTTGCTTGACAGCACTCAGCTTCCCACCATTAAAACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAATTCTCTTGCTTGACAGCACTCAGCTTCCCACCATTAAAACAA  331

seq1  GAATGAAAACACACATCTGCTGATGTCCAAGGACCTCCATCACTCCATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAACACACATCTGCTGATGTCCAAGGACCTCCATCACTCCATTA  381

seq1  CATGAGCATGACATTGACATCTAGCTGAAGAGTGTGGGGTTTGTTGTTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCATGACATTGACATCTAGCTGAAGAGTGTGGGGTTTGTTGTTAT  431

seq1  TTTTGTTTGCAACAGTGTCTTGTTATTTAGCCTGGCTGGCATGAGGCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGCAACAGTGTCTTGTTATTTAGCCTGGCTGGCATGAGGCTCT  481

seq1  CTGTGTAACCAAGGCTAGCTTCAAAATACAGCATTCCTTCTGCCACCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAACCAAGGCTAGCTTCAAAATACAGCATTCCTTCTGCCACCATA  531

seq1  ACCTGTGCACTGAGCTTCTAGGCATGCCTCACCACACCAAGCCTGAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCACTGAGCTTCTAGGCATGCCTCACCACACCAAGCCTGAAAGA  581

seq1  CTTGCAAGATGATAGAAGTGGGGTCAAAAGTCATGGGTGATAGGTTTGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAGATGATAGAAGTGGGGTCAAAAGTCATGGGTGATAGGTTTGGT  631

seq1  CTTCTGTAATAAGCACTATAGGGCCCTTTCATATAAATAAACAATGCGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAATAAGCACTATAGGGCCCTTTCATATAAATAAACAATGCGGT  681

seq1  CGGCTTGAATGGTGTAAATAAGATTCTGGTTTTATCTACCCATGTCACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTGAATGGTGTAAATAAGATTCTGGTTTTATCTACCCATGTCACAC  731

seq1  AAGGCAACTGACTCATGGCCACAAATCAGGATCTCAACACACCATGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAACTGACTCATGGCCACAAATCAGGATCTCAACACACCATGAAAA  781

seq1  CGGGGAGAAGAAAACAGAATTGTGCAGTCTCCCATGGGATACTTGATACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAGAAGAAAACAGAATTGTGCAGTCTCCCATGGGATACTTGATACT  831

seq1  ATGGTGGACCAACCCCTAATGGTATATGCAGTTTCACTGATGTAGTAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGACCAACCCCTAATGGTATATGCAGTTTCACTGATGTAGTAGGA  881

seq1  CTTTGGGAATTGCTCCAGAGCAAAGACAGCCACATTGCCTTGAATGCCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAATTGCTCCAGAGCAAAGACAGCCACATTGCCTTGAATGCCCA  931

seq1  AAACAGGATCGTTAAAGGGCATCAGAACATGCTACATCATAGTATGCCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGATCGTTAAAGGGCATCAGAACATGCTACATCATAGTATGCCAC  981

seq1  TGTAACATAAGAATTATTCTGAGCTAAAGTCATGTTCGAGAACATACTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATAAGAATTATTCTGAGCTAAAGTCATGTTCGAGAACATACTGA  1031

seq1  TGCAGAAGATAAAATCCACACATAGAAGATGACCTCTTTGTATCAGAAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGATAAAATCCACACATAGAAGATGACCTCTTTGTATCAGAAGC  1081

seq1  AGAAGGACTAAGGGTTGGTGTGGGGTAGCAAGCCTGAGAGCAAGAGAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACTAAGGGTTGGTGTGGGGTAGCAAGCCTGAGAGCAAGAGAATT  1131

seq1  C  1150
      |
seq2  C  1132