BAC Information

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BAC

Clone NameB6Ng01-316G22
Chromosome14 (Build37)
Map Location 40,163,139 - 40,164,277
singlet/doubletsinglet
Overlap geneNrg3
Upstream geneLOC100041521
Downstream geneLOC100040439, LOC218945, LOC100040470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316G22.bB6Ng01-316G22.g
ACCGA106831GA106832
length9951,136
definitionB6Ng01-316G22.b B6Ng01-316G22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagttcctcttggaggattttacctttgatgagtatgaagtgt
ccctccttgtcatttttgatgactttaggttggaagtcgatttcattaga
tattagaatggatactccagcttgtttcttcagaccatttgcttggaaaa
ttgttttccagcctttcattctgaggtagtgtctgtctttttccctgaga
tgagtttcctgtgagcagcaaaatgttgggtcctgtttgtgtagccagtc
tgttagtctatgtctttttattggggagttgagtccattgatattaagag
atattaacgaaaagtaattgttgcttcctattatttttgttgttagagtt
ggcattctcttcttgtggttgtcttcttttaggtttgttgaaggattatt
ttcttgcttttttagggcatgttttccatccttgtttttttgtttttttg
tttgtttgtttgtttgttttttctgttattatcctttgaagccttggatt
cgtggaaagataacatgtgaatttggttttgtcatggaatactttggttt
ctccatctatggtaattgaaagtttggctgggtatagtagcctgggctgg
catttgtgttctcttagtgtctgtaaagtccaggatcttctggctttcat
ggtctctggtgaaaagtctggtgtaattctgataggcctgcctttatatg
ttactttgacccttttcccttactacttttaatattctatctttacttag
tgcatttgctgttctgattactatgtgtcaggaggaatttcttttctggt
ccaagtctatttggagttctgcaggcttcttgtatgttcatgggcatctc
tttctttaggtttggggaagtttttcttctataattttgttgaagatatt
tgccggccctttaagttgaaaatcttcatttcttcatctactcctatcat
cctaggtttggtcttctcatgtgtcctgaattcctggaatgtttt

gaattcactgccacctcagttaaatgtacacaattcttttcttataaata
atggcgaaacaatgctgctccttctctttcctcgatcattgaaaaacgca
aaagatttaaagggtagacagctggctgactttgtgccttctcttcactt
tgcagaatgcaataccttatgaaagataacaggagcttctaaggcagcag
aatcaaagtagttggtgagtggtgaaaagtcttgggttcatgtacaaggg
atatgatggcttcctagagcatagctcaagtgttgcccacatccaactat
gtggtatgggtttggaatatgagtttaaaatctcaggcttctttcttaag
gatctagagtgatgaatcactatttgctgagatgtgagatatgataaata
ttctgaaaaagaggaaaatacctgtgttcttttacttgcaggctcctcct
ccaaccccattgcttagaaggataagttagaatgttcttcccaccgctac
agtttcaagggaggtatttgtttcttactttcatctgatcttaatttgtg
attgctgttcccattctaattttaatttcctgagcatttccaatgcttca
ctccttagaaatttagaagtgatttttacatttatcctggaatggagtcc
tctccttactacattgccttcagaggccacagcagcatagctaggagtga
aaaaaaaaaacaaacaaacaatttcattctaagatgaaaggtagagagaa
ggtgtcttcaaaagacacacttaaatggtattaactgaagctacacaaag
ccagaagtcagaggcatgctcttgtacatttctgatgactgtcacacaca
cttagagcatttccaggctatgtcctgggaagaatgtagtttcaattctt
cacattttacagaatgcaaaacagcacaaagcaggaaataaacacagttc
ctaaattacagctatatctattctgtgtccatttgctagcggttgagttt
gaactatgggcatcaatgctacctcactgctcttacgctggtcttaccca
gtaggtcattttgtatttgactaggacactggtttttgaattatttaata
ctccagaattctcccatttctatgtgcattgcaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_40163139_40164277
seq2: B6Ng01-316G22.g_67_1202

seq1  GAATTCACTGCCACCTCAGTTAAATGTACACAATTCTTTTCTTATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCCACCTCAGTTAAATGTACACAATTCTTTTCTTATAAATA  50

seq1  ATGGCGAAACAATGCTGCTCCTTCTCTTTCCTCGATCATTGAAAAACGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGAAACAATGCTGCTCCTTCTCTTTCCTCGATCATTGAAAAACGCA  100

seq1  AAAGATTTAAAGGGTAGACAGCTGGCTGACTTTGTGCCTTCTCTTCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTAAAGGGTAGACAGCTGGCTGACTTTGTGCCTTCTCTTCACTT  150

seq1  TGCAGAATGCAATACCTTATGAAAGATAACAGGAGCTTCTAAGGCAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATGCAATACCTTATGAAAGATAACAGGAGCTTCTAAGGCAGCAG  200

seq1  AATCAAAGTAGTTGGTGAGTGGTGAAAAGTCTTGGGTTCATGTACAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGTAGTTGGTGAGTGGTGAAAAGTCTTGGGTTCATGTACAAGGG  250

seq1  ATATGATGGCTTCCTAGAGCATAGCTCAAGTGTTGCCCACATCCAACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGGCTTCCTAGAGCATAGCTCAAGTGTTGCCCACATCCAACTAT  300

seq1  GTGGTATGGGTTTGGAATATGAGTTTAAAATCTCAGGCTTCTTTCTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATGGGTTTGGAATATGAGTTTAAAATCTCAGGCTTCTTTCTTAAG  350

seq1  GATCTAGAGTGATGAATCACTATTTGCTGAGATGTGAGATATGATAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGAGTGATGAATCACTATTTGCTGAGATGTGAGATATGATAAATA  400

seq1  TTCTGAAAAAGAGGAAAATACCTGTGTTCTTTTACTTGCAGGCTCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAAAGAGGAAAATACCTGTGTTCTTTTACTTGCAGGCTCCTCCT  450

seq1  CCAACCCCATTGCTTAGAAGGATAAGTTAGAATGTTCTTCCCACCGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCCATTGCTTAGAAGGATAAGTTAGAATGTTCTTCCCACCGCTAC  500

seq1  AGTTTCAAGGGAGGTATTTGTTTCTTACTTTCATCTGATCTTAATTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAGGGAGGTATTTGTTTCTTACTTTCATCTGATCTTAATTTGTG  550

seq1  ATTGCTGTTCCCATTCTAATTTTAATTTCCTGAGCATTTCCAATGCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTTCCCATTCTAATTTTAATTTCCTGAGCATTTCCAATGCTTCA  600

seq1  CTCCTTAGAAATTTAGAAGTGATTTTTACATTTATCCTGGAATGGAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGAAATTTAGAAGTGATTTTTACATTTATCCTGGAATGGAGTCC  650

seq1  TCTCCTTACTACATTGCCTTCAGAGGCCACAGCAGCATAGCTAGGAGTG-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTCCTTACTACATTGCCTTCAGAGGCCACAGCAGCATAGCTAGGAGTGA  700

seq1  AAAAAAAAAACAAACAAACAATTTCATTCTAAGATGAAAGGTAGAGAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAAACAAACAATTTCATTCTAAGATGAAAGGTAGAGAGAA  750

seq1  GGTGTCTTCAAAAGACACACTTAAATGGTATTAACTGAAGCTACACAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTCAAAAGACACACTTAAATGGTATTAACTGAAGCTACACAAAG  800

seq1  CCAGAAGTCAGAGGCATGCTCTTGTACATTTCTGATGACTGTCACACACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTCAGAGGCATGCTCTTGTACATTTCTGATGACTGTCACACACA  850

seq1  CTTAGAGCATTTCCAGGCTATGTCCTGGGAAGAATGTAGTTTCAATTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGCATTTCCAGGCTATGTCCTGGGAAGAATGTAGTTTCAATTCTT  900

seq1  CACATTTTACAGAATGCAAAACAGCACAAAGCAGGAAATAAACACAGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTACAGAATGCAAAACAGCACAAAGCAGGAAATAAACACAGTTC  950

seq1  CTAAATTACAGTTTATATCTTATTTTCTGTGTCCATTTGCTAGCGGTTGA  999
      |||||||||||  ||||||   | ||||||||||||||||||||||||||
seq2  CTAAATTACAG-CTATATC---TATTCTGTGTCCATTTGCTAGCGGTTGA  996

seq1  GGTTTGAACTATGGGCATCAAATGCTACTCAACTGCTCTACCGCTGGTCT  1049
       |||||||||||||||||| ||||||||   ||||||||  |||||||||
seq2  -GTTTGAACTATGGGCATC-AATGCTACCTCACTGCTCTTACGCTGGTCT  1044

seq1  ACCCCAGTAAGTCA-TTTGTATTTAAACAAAGAAAAAATATGTTTTGATA  1098
        ||||||| |||| |||||||||  || | |  | | |   ||||||  
seq2  TACCCAGTAGGTCATTTTGTATTT-GACTAGG--ACACTGGTTTTTGAAT  1091

seq1  TATTTAATACTCCA-AGATCTCC---ATCTATGTGGATTGCAAAT  1139
      |||||||||||||| |  |||||    |||||||| |||||||||
seq2  TATTTAATACTCCAGAATTCTCCCATTTCTATGTGCATTGCAAAT  1136


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