BAC Information

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BAC

Clone NameB6Ng01-317E12
Chromosome14 (Build37)
Map Location 35,507,914 - 35,655,470
singlet/doubletdoublet
Overlap geneWapal, LOC100041341, Grid1
Upstream geneGdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik
Downstream gene4930596D02Rik, LOC100040277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317E12.bB6Ng01-317E12.g
ACCGA107467GA107468
length4471,149
definitionB6Ng01-317E12.b B6Ng01-317E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,507,914 - 35,508,366)(35,654,311 - 35,655,470)
sequence
caggccagctaattataagcacccattctcagtaaaagagaaaatgtttg
attttttgctgatagtacaaaaatacaactagaaaagatatgtaataggt
tttgaagtaagagaatagggttagagtacttcatcaaccactactatttt
taatcctttattattttctccaacattaatgtttttaaaaaaccttgtgt
tttctgataacttgaaacactggaaagctagctagttttgattaccattt
cagaaaacttggattttacagaggacttgcctggtgtgcctgagagtgtg
aagaagcccataagtaaacaaggagataaatccaaggaaaataccagaaa
gatttttagtggccccaaacgggtaagtaaagcattaacactggtgtttt
tttttaataaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccagagaagtctctagaaaagcctggtgaggtaaaggccagaaag
aagcagcagtgagttagaggaagccatgagactggcagagacaagaccag
aaaagatcagaggctcactggggaggggtgaggtagacccgtgcctgccc
ttggggaccagattcagtgattactgcacggcttcagacacgctaattaa
cttgcggctcccaggggcaggcttcgctcctgccactgatgactactagc
ccgcacagaactacttatagggtgcacaccagggaagaaaggcagagctt
ttggctcctgctaggcaggatggctgccttgagagccctagtgggcagta
tggaggccagctatgcctgctgaggaacccacaagaatggaagagaacga
gtggaggcagacagcactgcgccagagaccaggtggcaacgctgggaaga
aggtgacctcaggaaaatgtgaactcaggtaggattacccaagatgcacc
aggggccttccaaagggttacaggacaacatcttcggcctgggtgtgaca
atcagcacagatactcagtcccccacgacacccacattggttgagctcct
gccgtcttcctagtgcagtgctggagaaaaaagacccccaaagacaaaga
caatctctggcctcctaaagcatcgtgagaatgggtacaagcatccaagc
agtacaaggacagtgatgttgatggggtggcaggaagtaaggtaaaactc
aaaatggaggctaaggaaggcaaaggaaatgtgcccagagcaagaggaga
gtgagccacacagacagaaagggacactcagggagcctctcggggactct
aggtgaggcctgtgaagaacaggacaaaacctaaactttaggatgagtga
gaatggaagcagatatgcagaaaccacacaacactgatccgaccaaacca
ggaagccccaaaagagggtaatgacatctctaaaggctggagggatggac
gtagggagagaagcagagaaacccctgtgatacaccatactggaggactg
tcacagagtggggagcctagtggtgtcctggaaagatgcagccaacacag
cattcaccctgtctggatgcacctatggacaaatgtgggtaaggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35507914_35508366
seq2: B6Ng01-317E12.b_43_495

seq1  GAATTCCAGGCCAGCTAATTATAAGCACCCATTCTCAGTAAAAGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGCTAATTATAAGCACCCATTCTCAGTAAAAGAGAAAA  50

seq1  TGTTTGATTTTTTGCTGATAGTACAAAAATACAACTAGAAAAGATATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATTTTTTGCTGATAGTACAAAAATACAACTAGAAAAGATATGTA  100

seq1  ATAGGTTTTGAAGTAAGAGAATAGGGTTAGAGTACTTCATCAACCACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTTTGAAGTAAGAGAATAGGGTTAGAGTACTTCATCAACCACTAC  150

seq1  TATTTTTAATCCTTTATTATTTTCTCCAACATTAATGTTTTTAAAAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATCCTTTATTATTTTCTCCAACATTAATGTTTTTAAAAAACC  200

seq1  TTGTGTTTTCTGATAACTTGAAACACTGGAAAGCTAGCTAGTTTTGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTCTGATAACTTGAAACACTGGAAAGCTAGCTAGTTTTGATTA  250

seq1  CCATTTCAGAAAACTTGGATTTTACAGAGGACTTGCCTGGTGTGCCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAGAAAACTTGGATTTTACAGAGGACTTGCCTGGTGTGCCTGAG  300

seq1  AGTGTGAAGAAGCCCATAAGTAAACAAGGAGATAAATCCAAGGAAAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAAGAAGCCCATAAGTAAACAAGGAGATAAATCCAAGGAAAATAC  350

seq1  CAGAAAGATTTTTAGTGGCCCCAAACGGGTAAGTAAAGCATTAACACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATTTTTAGTGGCCCCAAACGGGTAAGTAAAGCATTAACACTGG  400

seq1  TGTTTTTTTTTAATAAAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTTAATAAAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  450

seq1  GTG  453
      |||
seq2  GTG  453

seq1: chr14_35654311_35655470
seq2: B6Ng01-317E12.g_67_1215 (reverse)

seq1  TCCTTCCCTCTTCCCCACCATTTGGCCCATAGGTGCATCCCAGGGACAGG  50
      ||||||   ||| |||| ||||| | ||||||||||||||    ||||||
seq2  TCCTTC---CTTACCCA-CATTT-GTCCATAGGTGCATCC---AGACAGG  42

seq1  GTGAATGCTGGTGTTTGCCTGCATTCTTTCAGGACA-CACTAGGCT-CCC  98
      ||||||||| ||| ||| ||||||  || ||||||| ||||||||| |||
seq2  GTGAATGCT-GTG-TTGGCTGCATCTTTCCAGGACACCACTAGGCTCCCC  90

seq1  ACTCTTGTGACAGGTCCT-CAGTAT-GTGTATCAACAGGGGTTTCTCCTG  146
      |||| ||||||| ||||| |||||| ||||||| |||||||||||| |||
seq2  ACTC-TGTGACA-GTCCTCCAGTATGGTGTATC-ACAGGGGTTTCT-CTG  136

seq1  CTTCTCTCCTTACGTCCATCCCTCCAGCCTTTAGAAGATGTCATTACCCT  196
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  CTTCTCTCCCTACGTCCATCCCTCCAGCCTTTAG-AGATGTCATTACCCT  185

seq1  CTTTTGGGGCTTCCTGGTTTGGTCGGATCAGTGTTGTGTGGTTTCTGCAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGGCTTCCTGGTTTGGTCGGATCAGTGTTGTGTGGTTTCTGCAT  235

seq1  ATCTTGCTTCCATTCTCACTCATCCTAAAGTTTAGGTTTTGTCCTGTTCT  296
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATC-TGCTTCCATTCTCACTCATCCTAAAGTTTAGGTTTTGTCCTGTTCT  284

seq1  TCACAGGCCTCACCTAGAGTCCCCGAGAGGCTCCCTGAGTGTCCC-TTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCACAGGCCTCACCTAGAGTCCCCGAGAGGCTCCCTGAGTGTCCCTTTCT  334

seq1  GTCTGTGTGGCTCACTCTCCTCTTGCTCTGGGCACATTTCCTTTGCCTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTGGCTCACTCTCCTCTTGCTCTGGGCACATTTCCTTTGCCTTC  384

seq1  CTTAGCCTCCATTTTGAGTTTTACCTTACTTCCTGCCACCCCATCAACAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTCCATTTTGAGTTTTACCTTACTTCCTGCCACCCCATCAACAT  434

seq1  CACTGTCCTTGTACTGCTTGGATGCTTGTACCCATTCTCACGATGCTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCCTTGTACTGCTTGGATGCTTGTACCCATTCTCACGATGCTTTA  484

seq1  GGAGGCCAGAGATTGTCTTTGTCTTTGGGGGTCTTTTTTCTCCAGCACTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCAGAGATTGTCTTTGTCTTTGGGGGTCTTTTTTCTCCAGCACTG  534

seq1  CACTAGGAAGACGGCAGGAGCTCAACCAATGTGGGTGTCGTGGGGGACTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGAAGACGGCAGGAGCTCAACCAATGTGGGTGTCGTGGGGGACTG  584

seq1  AGTATCTGTGCTGATTGTCACACCCAGGCCGAAGATGTTGTCCTGTAACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGTGCTGATTGTCACACCCAGGCCGAAGATGTTGTCCTGTAACC  634

seq1  CTTTGGAAGGCCCCTGGTGCATCTTGGGTAATCCTACCTGAGTTCACATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGGCCCCTGGTGCATCTTGGGTAATCCTACCTGAGTTCACATT  684

seq1  TTCCTGAGGTCACCTTCTTCCCAGCGTTGCCACCTGGTCTCTGGCGCAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGGTCACCTTCTTCCCAGCGTTGCCACCTGGTCTCTGGCGCAGT  734

seq1  GCTGTCTGCCTCCACTCGTTCTCTTCCATTCTTGTGGGTTCCTCAGCAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGCCTCCACTCGTTCTCTTCCATTCTTGTGGGTTCCTCAGCAGG  784

seq1  CATAGCTGGCCTCCATACTGCCCACTAGGGCTCTCAAGGCAGCCATCCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTGGCCTCCATACTGCCCACTAGGGCTCTCAAGGCAGCCATCCTG  834

seq1  CCTAGCAGGAGCCAAAAGCTCTGCCTTTCTTCCCTGGTGTGCACCCTATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGGAGCCAAAAGCTCTGCCTTTCTTCCCTGGTGTGCACCCTATA  884

seq1  AGTAGTTCTGTGCGGGCTAGTAGTCATCAGTGGCAGGAGCGAAGCCTGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCTGTGCGGGCTAGTAGTCATCAGTGGCAGGAGCGAAGCCTGCC  934

seq1  CCTGGGAGCCGCAAGTTAATTAGCGTGTCTGAAGCCGTGCAGTAATCACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGCCGCAAGTTAATTAGCGTGTCTGAAGCCGTGCAGTAATCACT  984

seq1  GAATCTGGTCCCCAAGGGCAGGCACGGGTCTACCTCACCCCTCCCCAGTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGTCCCCAAGGGCAGGCACGGGTCTACCTCACCCCTCCCCAGTG  1034

seq1  AGCCTCTGATCTTTTCTGGTCTTGTCTCTGCCAGTCTCATGGCTTCCTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGATCTTTTCTGGTCTTGTCTCTGCCAGTCTCATGGCTTCCTCT  1084

seq1  AACTCACTGCTGCTTCTTTCTGGCCTTTACCTCACCAGGCTTTTCTAGAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTGCTGCTTCTTTCTGGCCTTTACCTCACCAGGCTTTTCTAGAG  1134

seq1  ACTTCTCTGGAATTC  1160
      |||||||||||||||
seq2  ACTTCTCTGGAATTC  1149