BAC Information

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BAC

Clone NameB6Ng01-318C10
Chromosome14 (Build37)
Map Location 90,076,172 - 90,198,408
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318C10.bB6Ng01-318C10.g
ACCGA108112GA108113
length1,1351,079
definitionB6Ng01-318C10.b B6Ng01-318C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,197,288 - 90,198,408)(90,076,172 - 90,077,256)
sequence
gaattccacccctgaagcatttaaagagcactttgttttctcttgtaaca
gcacagatgttgaaaactataaaatggatgtagtgaagagaattataatg
tcacaaagagacttggtaagtatgtactttccaaacaaaaggagtagtag
ttagagacttagaaagacgctgtctcgcataatgtacttaacacagtaaa
gtttccagtagagtgaaacctgagggcagacactagtgaccagctctctt
cttctaaagggaggttgtgaaaatatgaaactctgaacgcttctggtaga
atcgacttcagtaagtggcaaagcattccactcagggcaaatgcctcaac
accttgttgcactgagtccacccagtttctgcctgccaggctacttcttt
gaaacaattttggctcagaaaataataagggatttttttttttagatgtg
ctttgcatgctaacattgttctgagatgccttggttgttgctgattctgt
tacttacacagacttcagatctgtgatataataaggatataactttgtca
tccattgttaagtagcacatcttcctcttcggaatttctcttaatgaact
ttaaatcaataagccagttttggaatatgaatttttgaagcatagattgg
catttttaaaaagagtgagtataatattaactacttgcaatgtagggttt
gcacacatatctggtagagatatatgaaagcagatggtgtgacctttgga
aaatccttatcccatagtgtttaagcattgtgggaatttagcatcacgtg
aaaagatatggttttctgagaggtgaatagatatgtatctaaatccctat
gtattcttaaactccccagggatcatatgcgagatctctattttatattg
gaaatgaaatatataacagcatgtttaacaaaatacatttaggtattctc
agactcattatgggtataattaagttgaaacagtgcccttcatgtaacaa
atggttagacaaatcagatactgcccttttatataagccatatgagcatc
taacctaaaagtaaggtatacattgcatgaattaagtaatgaatggtaga
gattttcttttttcccctgttaagatttatggggg

gaattccatgaaccccctggccatgtgtcctctgtaatattttagttcag
ttaatatattgcaaaacttatgtttaaggaggtttcaatatttactaata
caattcagtgttccaagaatataatatctagtttattctgaattcttcag
aatatactgtttatataaaagtctgaattttttctattttcccataacat
cacattagtatcaaagtcaattgtttactattactaaaggtcagtgagtt
ctattactatgtggtagttgaggtctacaattatttgcttactctttaat
aactaaactttcagatagtttaagtattaatatataaatactaagtttga
aaaaattcgtacatttatttattcaaaataaaaatcgggaaaatttcata
atgtacatatttatttatatgtaggatacaaatgtaatcttcataaagat
ggtatttttcttcttgatttgggttttgtattgagtttgaggaatggtct
tggactgccccttaacttactgagtactgtaattgtctaggcagttagtc
ccaggagccactggtctttgaatcttcagactgggatgacacggttaacc
ttgatacttggatttttttttcacatgggaatatgtttagggatcaaact
atgtgttcattcttgtatgacaaccactttaccaatagtgttctcctaac
caatgaatcttcttttagtgaaataatcaaaagcctctaaaagatactga
aaagagacttgggtaatctagactgagaatttcaattaaacaattctaca
gaatggatatttggaaaataaaaagcacttagaattagatcaagttggta
ttttctattcctctaacttccctttgttattaaagaggagacataatatt
ttatgaaatcatttaatgttttaaaaggtgataatattttacaaatacaa
ataaaccatagaaaaattaattatgcatattattataaactttacagcat
attagtatgtctctgccttcgatattacacttgaatataaaaaagaaatc
agctagctagagggagtaaccaatggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90197288_90198408
seq2: B6Ng01-318C10.b_43_1177 (reverse)

seq1  CCCCCATAAAATCTAACAGGGG--AAAAGAAAATCTCTA-CATTCATTAC  47
      ||||||||||   |||||||||  ||||||||||||||| ||||||||||
seq2  CCCCCATAAATCTTAACAGGGGAAAAAAGAAAATCTCTACCATTCATTAC  50

seq1  TTAA-TCATGCAATGTATACTTAACTTTTA-GTTAGATGCTCATAT-GCT  94
      |||| ||||||||||||||| | ||||||| ||||||||||||||| |||
seq2  TTAATTCATGCAATGTATACCTTACTTTTAGGTTAGATGCTCATATGGCT  100

seq1  TATATAAAA-GGCAGTATCTGATTTGTCT-ACCATTTGTTACATGAA-GG  141
      ||||||||| ||||||||||||||||||| ||||||||||||||||| ||
seq2  TATATAAAAGGGCAGTATCTGATTTGTCTAACCATTTGTTACATGAAGGG  150

seq1  CACTGTTTC-ACTTAA-TATACCCATAATGAGTCTGAGAATACCT-AATG  188
      ||||||||| |||||| |||||||||||||||||||||||||||| ||||
seq2  CACTGTTTCAACTTAATTATACCCATAATGAGTCTGAGAATACCTAAATG  200

seq1  TATTTTGTT-AACATGCTGTTATATATTTCA-TTCCAATATAAAATAGAG  236
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  TATTTTGTTAAACATGCTGTTATATATTTCATTTCCAATATAAAATAGAG  250

seq1  ATCTCGCATATGATCCCTGGGGAGTTTAAGAATACATAGGGATTTAGATA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGCATATGATCCCTGGGGAGTTTAAGAATACATAGGGATTTAGATA  300

seq1  CATATCTATTCACCTCTCAGAAAACCATATCTTTTCACGTGATGCTAAAT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTATTCACCTCTCAGAAAACCATATCTTTTCACGTGATGCTAAAT  350

seq1  TCCCACAATGCTTAAACACTATGGGATAAGGATTTTCCAAAGGTCACACC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAATGCTTAAACACTATGGGATAAGGATTTTCCAAAGGTCACACC  400

seq1  ATCTGCTTTCATATATCTCTACCAGATATGTGTGCAAACCCTACATTGCA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTTCATATATCTCTACCAGATATGTGTGCAAACCCTACATTGCA  450

seq1  AGTAGTTAATATTATACTCACTCTTTTTAAAAATGCCAATCTATGCTTCA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAATATTATACTCACTCTTTTTAAAAATGCCAATCTATGCTTCA  500

seq1  AAAATTCATATTCCAAAACTGGCTTATTGATTTAAAGTTCATTAAGAGAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCATATTCCAAAACTGGCTTATTGATTTAAAGTTCATTAAGAGAA  550

seq1  ATTCCGAAGAGGAAGATGTGCTACTTAACAATGGATGACAAAGTTATATC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGAAGAGGAAGATGTGCTACTTAACAATGGATGACAAAGTTATATC  600

seq1  CTTATTATATCACAGATCTGAAGTCTGTGTAAGTAACAGAATCAGCAACA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATATCACAGATCTGAAGTCTGTGTAAGTAACAGAATCAGCAACA  650

seq1  ACCAAGGCATCTCAGAACAATGTTAGCATGCAAAGCACATCTAAAAAAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCATCTCAGAACAATGTTAGCATGCAAAGCACATCTAAAAAAAA  700

seq1  AAATCCCTTATTATTTTCTGAGCCAAAATTGTTTCAAAGAAGTAGCCTGG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTTATTATTTTCTGAGCCAAAATTGTTTCAAAGAAGTAGCCTGG  750

seq1  CAGGCAGAAACTGGGTGGACTCAGTGCAACAAGGTGTTGAGGCATTTGCC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAAACTGGGTGGACTCAGTGCAACAAGGTGTTGAGGCATTTGCC  800

seq1  CTGAGTGGAATGCTTTGCCACTTACTGAAGTCGATTCTACCAGAAGCGTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGGAATGCTTTGCCACTTACTGAAGTCGATTCTACCAGAAGCGTT  850

seq1  CAGAGTTTCATATTTTCACAACCTCCCTTTAGAAGAAGAGAGCTGGTCAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTCATATTTTCACAACCTCCCTTTAGAAGAAGAGAGCTGGTCAC  900

seq1  TAGTGTCTGCCCTCAGGTTTCACTCTACTGGAAACTTTACTGTGTTAAGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTGCCCTCAGGTTTCACTCTACTGGAAACTTTACTGTGTTAAGT  950

seq1  ACATTATGCGAGACAGCGTCTTTCTAAGTCTCTAACTACTACTCCTTTTG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGCGAGACAGCGTCTTTCTAAGTCTCTAACTACTACTCCTTTTG  1000

seq1  TTTGGAAAGTACATACTTACCAAGTCTCTTTGTGACATTATAATTCTCTT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGTACATACTTACCAAGTCTCTTTGTGACATTATAATTCTCTT  1050

seq1  CACTACATCCATTTTATAGTTTTCAACATCTGTGCTGTTACAAGAGAAAA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATCCATTTTATAGTTTTCAACATCTGTGCTGTTACAAGAGAAAA  1100

seq1  CAAAGTGCTCTTTAAATGCTTCAGGGGTGGAATTC  1121
      |||||||||||||||||||||||||||||||||||
seq2  CAAAGTGCTCTTTAAATGCTTCAGGGGTGGAATTC  1135


seq1: chr14_90076172_90077256
seq2: B6Ng01-318C10.g_65_1143

seq1  GAATTCCATGAACCCCCTGGCCATGTGTCCTCTGTAATATTTTAGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAACCCCCTGGCCATGTGTCCTCTGTAATATTTTAGTTCAG  50

seq1  TTAATATATTGCAAAACTTATGTTTAAGGAGGTTTCAATATTTACTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATATTGCAAAACTTATGTTTAAGGAGGTTTCAATATTTACTAATA  100

seq1  CAATTCAGTGTTCCAAGAATATAATATCTAGTTTATTCTGAATTCTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAGTGTTCCAAGAATATAATATCTAGTTTATTCTGAATTCTTCAG  150

seq1  AATATACTGTTTATATAAAAGTCTGAATTTTTTCTATTTTCCCATAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGTTTATATAAAAGTCTGAATTTTTTCTATTTTCCCATAACAT  200

seq1  CACATTAGTATCAAAGTCAATTGTTTACTATTACTAAAGGTCAGTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGTATCAAAGTCAATTGTTTACTATTACTAAAGGTCAGTGAGTT  250

seq1  CTATTACTATGTGGTAGTTGAGGTCTACAATTATTTGCTTACTCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTATGTGGTAGTTGAGGTCTACAATTATTTGCTTACTCTTTAAT  300

seq1  AACTAAACTTTCAGATAGTTTAAGTATTAATATATAAATACTAAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACTTTCAGATAGTTTAAGTATTAATATATAAATACTAAGTTTGA  350

seq1  AAAAATTCGTACATTTATTTATTCAAAATAAAAATCGGGAAAATTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCGTACATTTATTTATTCAAAATAAAAATCGGGAAAATTTCATA  400

seq1  ATGTACATATTTATTTATATGTAGGATACAAATGTAATCTTCATAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATATTTATTTATATGTAGGATACAAATGTAATCTTCATAAAGAT  450

seq1  GGTATTTTTCTTCTTGATTTGGGTTTTGTATTGAGTTTGAGGAATGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTTCTTCTTGATTTGGGTTTTGTATTGAGTTTGAGGAATGGTCT  500

seq1  TGGACTGCCCCTTAACTTACTGAGTACTGTAATTGTCTAGGCAGTTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCCCCTTAACTTACTGAGTACTGTAATTGTCTAGGCAGTTAGTC  550

seq1  CCAGGAGCCACTGGTCTTTGAATCTTCAGACTGGGATGACACGGTTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCCACTGGTCTTTGAATCTTCAGACTGGGATGACACGGTTAACC  600

seq1  TTGATACTTGGATTTTTTTTTCACATGGGAATATGTTTAGGGATCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTTGGATTTTTTTTTCACATGGGAATATGTTTAGGGATCAAACT  650

seq1  ATGTGTTCATTCTTGTATGACAACCACTTTACCAATAGTGTTCTCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCATTCTTGTATGACAACCACTTTACCAATAGTGTTCTCCTAAC  700

seq1  CAATGAATCTTCTTTTAGTGAAATAATCAAAAGCCTCTAAAAGATACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATCTTCTTTTAGTGAAATAATCAAAAGCCTCTAAAAGATACTGA  750

seq1  AAAGAGACTTGGGTAATCTAGACTGAGAATTTCAATTAAACAATTCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACTTGGGTAATCTAGACTGAGAATTTCAATTAAACAATTCTACA  800

seq1  GAATGGATATTTGGAAAATAAAAAGCACTTAGAATTAGATCAAGTTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATATTTGGAAAATAAAAAGCACTTAGAATTAGATCAAGTTGGTA  850

seq1  TTTTCTATTCCTCTAACTTCCCTTTGTTATTAAAGAGGAGACATAAATAT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTTCTATTCCTCTAACTTCCCTTTGTTATTAAAGAGGAGACAT-AATAT  899

seq1  TTTATGAAATCATTTAATGTTTTAAAAGGTGATAAATATTTTACAAATAC  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTATGAAATCATTTAATGTTTTAAAAGGTGAT-AATATTTTACAAATAC  948

seq1  AAATAAACCATAGAAAAATTAATTATGCATATTATTATAAAACTTAACAG  1000
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  AAATAAACCATAGAAAAATTAATTATGCATATTATTAT-AAACTTTACAG  997

seq1  CATATTTAGTATGTCTCTGCCTTCGATATTTACAACTTTGAATAT-AAAA  1049
      |||| ||||||||||||||||||||||| |||||   |||||||| ||||
seq2  CATA-TTAGTATGTCTCTGCCTTCGATA-TTACA--CTTGAATATAAAAA  1043

seq1  AGAAATCAGCTAGCT-TAGAGAGTAAACCAATAGATT  1085
      |||||||||||||||  || |||| ||||||| ||||
seq2  AGAAATCAGCTAGCTAGAGGGAGT-AACCAATGGATT  1079


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