BAC Information

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BAC

Clone NameB6Ng01-319I08
Chromosome14 (Build37)
Map Location 6,170,728 - 6,171,846
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637
Downstream geneEG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319I08.bB6Ng01-319I08.g
ACCGA109129GA109130
length1,1201,073
definitionB6Ng01-319I08.b B6Ng01-319I08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacactgctgtgcacaaacccacacacagacacagacacccaagt
gaaaaagaaaagtcaaaaaatgtaacaacatgcttgaaaaacagcagttc
gcttctggtctgggatagctcagttggcctagaggaatgaagggctgggt
ttgagtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggca
gcatggtcagaatgatggagatctgtgagttatcatctggctgctaacta
aaagcaagggtggaacttgtagactgctcactcaccccacttaaccctca
ttcaaagtaaatgaagggcaggctacttaggcagcaggtaagaggccact
gaacaaagcatagtcacaaacaaagaagacccaacattccaaggcccctt
taaaggagagattcaggaatgcaaatctagtcagtcaagtcatagaaagt
gagggttggaaaccatccagtggcttagctctctgcacaatccttagtga
cctttataggtgtagctccagtggaatattagccttggaagttagtatga
cgtgggagcatgctggatcaagtacgtgttttgaattttcggtttcaaaa
catgtgaatgcatctgtctaccagactaagagccaggagatggtgctggc
aggagtctgaagtccatgcgagaggaaatgacccatgcaaatgcagtcac
tcctctgtttgcaactagatggaaactgtctccactgccagtaaagatga
tttcaggaaagatgattgaaaaacttgctagttgcaattatattttcttt
ttcccagagagcagcaggagagacagttgacattttagctgtctctgaac
tgcccctgtccctaatttgagttgagcgctcacaagggaaccacagacct
gctccttagctggtttactttccacaaaatcttcaggccatagaaaatga
ataaaagcagggctccctcagacagcccaagacaagacatccaagctgcc
agaaatagtgcttggggaggggctcagagcgcaaagcacagtcttgctct
gttgaagccaggttactgtcctgggcatgggctcagcttcagctcagagg
cgacacttgagctacaggca
gaattccagttttatgtttgataccgaattccttacagaatgaaataaaa
tttttactacaataggatggcccattatctgtcttaataagtttaggcaa
tcccatagcattaaagggttgcagacaatgatcaattacgtttttagaag
cctctcctgtatggagagaagggatcttgacggcatattgaagttaaatg
taccacaggtctcaaataagggtactgattgtgcaacatataaactgtca
gtaaagaaattaaaagcctcatgcacagactgaaagacctttagtactgc
tgttaatttggctaactgagccgaaaggccaggagtctctatgataactt
gttgattattaataagatatccagctcaccctttagaggagccatcagta
aaaatcaatagagcattatataaaggctgtaaggaagtcattttaggaaa
tatcacatcacgtacatttcaaaattttatcaacctatcttgggggtagt
ggctgtctatagttcccttaaaaggctgaacaatgatatctggctctttg
cagaaataagttaatgtctgtcttcttccagtgatcatcatctgtgccac
tgctttgtgatatggcaagatattacatttaggagaaatctttgagtgta
tccacattaaaggaaattttttgccatagcagttccataggcacatgagt
cgtattaaaaattaacagatgcaggggcaaggagtaacctatataagtga
caaattgctcttcaatagctttttccactagctgtaaggccagaaatcct
tctgaggttagggatctaggggtagtggggggatgtcctctgaattaact
tttgctaggtaattcagaatatacgtaatctctaacattggactgaataa
tagatccagttctaagattaagttagaattgactggtcacactgaagata
agagaaaatcattatgatctctattcaatgactatttttattaagtcagt
atattacagtcctctgatgactattgccataagtttaaagctagacgcta
gtccaatcgggaaaatggctagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6170728_6171846
seq2: B6Ng01-319I08.b_48_1167 (reverse)

seq1  TGCCTGTAGCTCCAGGTGGTCGCCTCCTGAGCTGAGCCTGGAGCCAATTG  50
      |||||||||||| ||   ||||||| |||||||||  || ||||| | ||
seq2  TGCCTGTAGCTCAAG--TGTCGCCT-CTGAGCTGAAGCT-GAGCCCA-TG  45

seq1  CCCAGGACAGT-ACCTGGCTTCAACAGAGCAAGGCTGTGCTTTGCGCTCC  99
      ||||||||||| ||||||||||||||||||||| |||||||||||||| |
seq2  CCCAGGACAGTAACCTGGCTTCAACAGAGCAAGACTGTGCTTTGCGCT-C  94

seq1  TGAGCCCCT-CCCAAGCACCTATTCTGGCAGCTTGGATGTC-TGTC-TGG  146
      ||||||||| |||||||||   ||||||||||||||||||| |||| |||
seq2  TGAGCCCCTCCCCAAGCACTATTTCTGGCAGCTTGGATGTCTTGTCTTGG  144

seq1  GCTGTCTG-GGGAGCCCTGCTTTTATTCATTTTCTATGG-CTGAAGATTT  194
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGTCTGAGGGAGCCCTGCTTTTATTCATTTTCTATGGCCTGAAGATTT  194

seq1  TGTGGAAAGTAAACCAGCTAAGGAGCAGGTCTGTGGTTCCC-TGTGAGCG  243
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTGGAAAGTAAACCAGCTAAGGAGCAGGTCTGTGGTTCCCTTGTGAGCG  244

seq1  CTCAACTCAAATTAGGGACAGGGGCAGTTCAGAGACAGCTAAAATGTCAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTCAAATTAGGGACAGGGGCAGTTCAGAGACAGCTAAAATGTCAA  294

seq1  CTGTCTCTCCTGCTGCTCTCTGGGAAAAAGAAAATATAATTGCAACTAGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCCTGCTGCTCTCTGGGAAAAAGAAAATATAATTGCAACTAGC  344

seq1  AAGTTTTTCAATCATCTTTCCTGAAATCATCTTTACTGGCAGTGGAGACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTCAATCATCTTTCCTGAAATCATCTTTACTGGCAGTGGAGACA  394

seq1  GTTTCCATCTAGTTGCAAACAGAGGAGTGACTGCATTTGCATGGGTCATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCTAGTTGCAAACAGAGGAGTGACTGCATTTGCATGGGTCATT  444

seq1  TCCTCTCGCATGGACTTCAGACTCCTGCCAGCACCATCTCCTGGCTCTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCGCATGGACTTCAGACTCCTGCCAGCACCATCTCCTGGCTCTTA  494

seq1  GTCTGGTAGACAGATGCATTCACATGTTTTGAAACCGAAAATTCAAAACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTAGACAGATGCATTCACATGTTTTGAAACCGAAAATTCAAAACA  544

seq1  CGTACTTGATCCAGCATGCTCCCACGTCATACTAACTTCCAAGGCTAATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTGATCCAGCATGCTCCCACGTCATACTAACTTCCAAGGCTAATA  594

seq1  TTCCACTGGAGCTACACCTATAAAGGTCACTAAGGATTGTGCAGAGAGCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGGAGCTACACCTATAAAGGTCACTAAGGATTGTGCAGAGAGCT  644

seq1  AAGCCACTGGATGGTTTCCAACCCTCACTTTCTATGACTTGACTGACTAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGGATGGTTTCCAACCCTCACTTTCTATGACTTGACTGACTAG  694

seq1  ATTTGCATTCCTGAATCTCTCCTTTAAAGGGGCCTTGGAATGTTGGGTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTCCTGAATCTCTCCTTTAAAGGGGCCTTGGAATGTTGGGTCT  744

seq1  TCTTTGTTTGTGACTATGCTTTGTTCAGTGGCCTCTTACCTGCTGCCTAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTTGTGACTATGCTTTGTTCAGTGGCCTCTTACCTGCTGCCTAA  794

seq1  GTAGCCTGCCCTTCATTTACTTTGAATGAGGGTTAAGTGGGGTGAGTGAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTGCCCTTCATTTACTTTGAATGAGGGTTAAGTGGGGTGAGTGAG  844

seq1  CAGTCTACAAGTTCCACCCTTGCTTTTAGTTAGCAGCCAGATGATAACTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTACAAGTTCCACCCTTGCTTTTAGTTAGCAGCCAGATGATAACTC  894

seq1  ACAGATCTCCATCATTCTGACCATGCTGCCTTTACCTCAGCACTGGGATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTCCATCATTCTGACCATGCTGCCTTTACCTCAGCACTGGGATC  944

seq1  ACAGATGAACACTGGGGCTCACTCAAACCCAGCCCTTCATTCCTCTAGGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAACACTGGGGCTCACTCAAACCCAGCCCTTCATTCCTCTAGGC  994

seq1  CAACTGAGCTATCCCAGACCAGAAGCGAACTGCTGTTTTTCAAGCATGTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAGCTATCCCAGACCAGAAGCGAACTGCTGTTTTTCAAGCATGTT  1044

seq1  GTTACATTTTTTGACTTTTCTTTTTCACTTGGGTGTCTGTGTCTGTGTGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTTTTTGACTTTTCTTTTTCACTTGGGTGTCTGTGTCTGTGTGT  1094

seq1  GGGTTTGTGCACAGCAGTGTGAATTC  1119
      ||||||||||||||||||||||||||
seq2  GGGTTTGTGCACAGCAGTGTGAATTC  1120