BAC Information

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BAC

Clone NameB6Ng01-319O24
Chromosome14 (Build37)
Map Location 32,628,342 - 32,820,291
singlet/doubletdoublet
Overlap geneAnkrd28
Upstream geneSfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd
Downstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319O24.bB6Ng01-319O24.g
ACCGA109445GA109446
length457827
definitionB6Ng01-319O24.b B6Ng01-319O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,628,342 - 32,628,773)(32,819,578 - 32,820,291)
sequence
tggcgaaaaagcatgatagaatatgcctggaatctctgcacttggagcag
ctgaggcagaaggatcttaagtttaaggacagcctatgctatattcaaaa
caaaccagaataaacaagactaatctgagtactataatgagcaatcctac
ctgtttctttgtcctgcctgagtattacagtattgctaacagacatagta
tatatagacactaatatggaacaatatgtaggaagggggtaagaattaaa
aacaaaactaagggattatttttctaaatttcagttaatataagattaag
aatatatttgggggtagggggagaatgttaatttccctgagcctggatta
agagcaacgggttgaacttatataatgcccaaaaacctgtgttcaatctc
gacgagggcaagggggagggaaaggaggcagggaaaagagtgggtttaca
gttagag
gaattcagcatagcgacacactattggcttattcaaacattaacagaaag
aacacagtgcatcaggactttgttcctgtgggctgggggcttatctttgt
tcacatagcaaccagttgatgtgtgacttttacccggcgccaaggggcaa
tagacagaggggagattccggccagatggtgttgactcagataatatagc
cctgctatgtcttcacagtcccctttatcttatggtcaagatgttcccag
gaatgttttaactacgaggcatacccaggtttgtttttctcttttctcag
ccccaggcagcctctaggctcacaaacaaccagcaatttctgagtacttt
atatgacttacaggtcttgaaatttcatctttctttcacagactcaaata
gactataaacacaaagagtgctttattctgcagaagttcagcatgctggg
gtctccccattaccaagatagagagacacccaagtgagctcacaggcctg
atttaaagcacactaggaaattctggggtagaaacttgctgggaagtcta
gaaactaatgctgaggaagtagctgagaaagtctggaaactgctgctgac
ccattgtccttgcctcaggccagggggcagggcagcttctgaggcctgga
cttgcctggaattgcccaggtcttggaaacagagatttaggcctagtttc
cttaactgtcagtttgaagcctgccgtggaatcagcccagccttctcacc
acaaaagcaaacaaataataacagagtttatttagggcatgggaagggga
gttgagaaagggaagagagagggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32628342_32628773
seq2: B6Ng01-319O24.b_49_481

seq1  GAATTCTGGCGAAAAAGCATGATAGAATATGCCTGGAATCTCTGCACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCGAAAAAGCATGATAGAATATGCCTGGAATCTCTGCACTTG  50

seq1  GAGCAGCTGAGGCAGAAGGATCTTAAGTTTAAGGACAGCCTATGCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCTGAGGCAGAAGGATCTTAAGTTTAAGGACAGCCTATGCTATAT  100

seq1  TCAAAACAAACCAGAATAAACAAGACTAATCTGAGTACTATAATGAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAAACCAGAATAAACAAGACTAATCTGAGTACTATAATGAGCAA  150

seq1  TCCTACCTGTTTCTTTGTCCTGCCTGAGTATTACAGTATTGCTAACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTGTTTCTTTGTCCTGCCTGAGTATTACAGTATTGCTAACAGAC  200

seq1  ATAGTATATATAGACACTAATATGGAACAATATGTAGGAAGGGGGTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATATATAGACACTAATATGGAACAATATGTAGGAAGGGGGTAAGA  250

seq1  ATTAAAAACAAAACTAAGGGATTATTTTTCTAAATTTCAGTTAATATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAACAAAACTAAGGGATTATTTTTCTAAATTTCAGTTAATATAAG  300

seq1  ATTAAGAATATATTTGGGGGTAGGGGGAGAATGTTAATTTCCTTGAGCCA  350
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  ATTAAGAATATATTTGGGGGTAGGGGGAGAATGTTAATTTCCCTGAGCCT  350

seq1  AGATAAAGAAGAGAGGGTTGAACTTATATAATGCCCAAGAACCTGTGTTC  400
       ||| ||||  |  |||||||||||||||||||||||| |||||||||||
seq2  GGATTAAGAGCAACGGGTTGAACTTATATAATGCCCAAAAACCTGTGTTC  400

seq1  AATCTCCACAACAAGGAGGGGGAGGG-GAGGAG  432
      |||||| || |     ||||||||||  |||||
seq2  AATCTCGACGAGGGCAAGGGGGAGGGAAAGGAG  433

seq1: chr14_32819578_32820291
seq2: B6Ng01-319O24.g_332_894 (reverse)

seq1  TTCTCCCTCTCTCCATCTCTCCCTTTCCCCTTTCCCTTTCTCCCTCTTCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTTCCAGATTGGCTCTCTCCTCTCCTCCCCTCCCCTCCCCTCTCCCT  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCT  150
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTCTCCCTCTCTCTTCCC-TTCTCAACTCCCCTTCCCATGCCCTAAAT  199
         ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  --TTCTCCCTCTCTCTTCCCTTTCTCAACTCCCCTTCCCATGCCCTAAAT  48

seq1  AAACTCTGTTATTATTTGTTTGCTTTTGTGGTGAGAAGGCTGGGCTGATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGTTATTATTTGTTTGCTTTTGTGGTGAGAAGGCTGGGCTGATT  98

seq1  CCACGGCAGGCTTCAAACTGACAGTTAAGGAAACTAGGCCTAAATCTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGCAGGCTTCAAACTGACAGTTAAGGAAACTAGGCCTAAATCTCTG  148

seq1  TTTCCAAGACCTGGGCAATTCCAGGCAAGTCCAGGCCTCAGAAGCTGCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAGACCTGGGCAATTCCAGGCAAGTCCAGGCCTCAGAAGCTGCCC  198

seq1  TGCCCCCTGGCCTGAGGCAAGGACAATGGGTCAGCAGCAGTTTCCAGACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCTGGCCTGAGGCAAGGACAATGGGTCAGCAGCAGTTTCCAGACT  248

seq1  TTCTCAGCTACTTCCTCAGCATTAGTTTCTAGACTTCCCAGCAAGTTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCTACTTCCTCAGCATTAGTTTCTAGACTTCCCAGCAAGTTTCT  298

seq1  ACCCCAGAATTTCCTAGTGTGCTTTAAATCAGGCCTGTGAGCTCACTTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGAATTTCCTAGTGTGCTTTAAATCAGGCCTGTGAGCTCACTTGG  348

seq1  GTGTCTCTCTATCTTGGTAATGGGGAGACCCCAGCATGCTGAACTTCTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTCTATCTTGGTAATGGGGAGACCCCAGCATGCTGAACTTCTGC  398

seq1  AGAATAAAGCACTCTTTGTGTTTATAGTCTATTTGAGTCTGTGAAAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGCACTCTTTGTGTTTATAGTCTATTTGAGTCTGTGAAAGAAA  448

seq1  GATGAAATTTCAAGACCTGTAAGTCATATAAAGTACTCAGAAATTGCTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATTTCAAGACCTGTAAGTCATATAAAGTACTCAGAAATTGCTGG  498

seq1  TTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAA  548

seq1  CCTGGGTATGCCTCG  714
      |||||||||||||||
seq2  CCTGGGTATGCCTCG  563