BAC Information

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BAC

Clone NameB6Ng01-320B13
Chromosome14 (Build37)
Map Location 121,004,453 - 121,154,721
singlet/doubletdoublet
Overlap geneLOC668835
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a
Downstream geneLOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320B13.bB6Ng01-320B13.g
ACCGA109558GA109559
length1,1191,115
definitionB6Ng01-320B13.b B6Ng01-320B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,004,453 - 121,005,578)(121,153,617 - 121,154,721)
sequence
gaattccaggataagtcacccatgtttcagtcaatctgaggagatctcct
tcctgttgtattccctgtggctgaaggacaataaacagccttgtctctct
gcccagaagttcatagatcaagagagagccacacagctaatgtcttagtt
ttggctacttattgctatgatgaaacacaaagcaacttgggaagaaaggg
gtctatttggcttttgcttctgcatcactattccccatagaaggagatca
ggacagaaacctagaggcaggagctgatgcagaggccatggatgggtgct
gtttactggcttgctccttcctcatggcttgctaagtctgctttcttata
aaattcaggaccactagactagggatggtcccacccacaatgggctgagc
cctcctccatcaatcactaattaagaaaatgctctatagtcttgcctaca
gcctgacctatagaggcatttttctcagtagaggctccttcctctctgat
aactgcaactcatgtcaagttgacacaacccagccagcacagtttggatt
gttactaatagtacttttctaccatagggtttacagtgaggttctggagg
agtcacgagcaatggcagtagtctattgtttgtgtggaagaagaagatct
atgtaaccccactgaccagcagctcaaaaggaggaaacctatacccagca
ctgagcctgttacctgataccttatagtctgggagagttatttctccaac
taccccaacttgtagatgtaaatgcatgtaatatagaaagcatctgctgt
ttccatcttaagagacagaagtagtggacatctgcagtgaaacagtattt
cctcagcataacagcagttacacacttgaactcatggtcactggagtggc
atgtacaagattcatgtaaggcaaaccagtcaaagtctaagcatagttag
gagagctctcataaaatcccaccacccaatagttagagagctatggcaac
tgaagacttctttgggtcatttctcaggatgtgaccctggaggggatatt
atggtccagtagataagccttacatctatgaacatatagaaagcacttaa
tgggtccagtgatgagaga
gaattcactgccttgtgcgggaggctcttttatgccgggcttggtacttt
cttagaagtctttgtctcatattggattgaactagttttctgcaagaggc
acaatttggttccaggagagtgaaaaagtgcctctgtagatgacgtagca
gcggcatagtgttgaagactctgggaccagattgctaaggggcctattct
gtcccaccttcctgttggtgtgggcagtctgtaccttctctgtgattcag
tatcctcacagtgacacggggaacctagacaatgttggtgatgacgactc
tcgctgtctctcagcataggacagaaggaaggactgagctttgaggacga
tgtctgggacatcgtgcgcatgcggaacatttatcatcactcagaagatg
ttgtggaaacggatgatgtaaacatgaagccccgggacagagcccgtgtt
ggagagcattccgcagatctggtgtctgcatcccctaccctcctgcttcc
ttacttccttgtccccctctttccaacatttgtctttccagaagctcagt
tcattcctggcctccattagacatttgtgcaggaggaaacgagcccagcc
aaagcccctgctccttctcgctgcactcagcccttcatgtggtcatgagt
ttttggctgatgttgtctccccccccctccaaaaaaattgatgaattaag
gtactttcatatctgcagcatattcttccaattgtctcagcatcagatga
gatctgtcccttctattgggtaattattacacttattgttattattatta
ttattgttattattattattattatttggtttttcgagacagggtttctc
tgtgtagtgctggctgtcctggaactcattctgtagaccaggctgggcct
cgaactcagagatccgcctccctctgcctcccaagtgctgggattaaagg
cgtgcgcccaccactgccctggcctttattattttattatttactttcac
tttaattaaaggagtttccaggaaatagacttggtcccagaaatgacatt
tctaagacatgactaactttatcaaaggtagaacagttagaatcaaagat
aaaattgtgtgtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121004453_121005578
seq2: B6Ng01-320B13.b_47_1165

seq1  GAATTCCAGGATAAGTCACCCATGTTTCAGTCAATCTGAGGAGATCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAAGTCACCCATGTTTCAGTCAATCTGAGGAGATCTCCT  50

seq1  TCCTGTTGTATTCCCTGTGGCTGAAGGACAATAAACAGCCTTGTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGTATTCCCTGTGGCTGAAGGACAATAAACAGCCTTGTCTCTCT  100

seq1  GCCCAGAAGTTCATAGATCAAGAGAGAGCCACACAGCTAATGTCTTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAGTTCATAGATCAAGAGAGAGCCACACAGCTAATGTCTTAGTT  150

seq1  TTGGCTACTTATTGCTATGATGAAACACAAAGCAACTTGGGAAGAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTACTTATTGCTATGATGAAACACAAAGCAACTTGGGAAGAAAGGG  200

seq1  GTCTATTTGGCTTTTGCTTCTGCATCACTATTCCCCATAGAAGGAGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTGGCTTTTGCTTCTGCATCACTATTCCCCATAGAAGGAGATCA  250

seq1  GGACAGAAACCTAGAGGCAGGAGCTGATGCAGAGGCCATGGATGGGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAACCTAGAGGCAGGAGCTGATGCAGAGGCCATGGATGGGTGCT  300

seq1  GTTTACTGGCTTGCTCCTTCCTCATGGCTTGCTAAGTCTGCTTTCTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGGCTTGCTCCTTCCTCATGGCTTGCTAAGTCTGCTTTCTTATA  350

seq1  AAATTCAGGACCACTAGACTAGGGATGGTCCCACCCACAATGGGCTGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGGACCACTAGACTAGGGATGGTCCCACCCACAATGGGCTGAGC  400

seq1  CCTCCTCCATCAATCACTAATTAAGAAAATGCTCTATAGTCTTGCCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCATCAATCACTAATTAAGAAAATGCTCTATAGTCTTGCCTACA  450

seq1  GCCTGACCTATAGAGGCATTTTTCTCAGTAGAGGCTCCTTCCTCTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACCTATAGAGGCATTTTTCTCAGTAGAGGCTCCTTCCTCTCTGAT  500

seq1  AACTGCAACTCATGTCAAGTTGACACAACCCAGCCAGCACAGTTTGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAACTCATGTCAAGTTGACACAACCCAGCCAGCACAGTTTGGATT  550

seq1  GTTACTAATAGTACTTTTCTACCATAGGGTTTACAGTGAGGTTCTGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAATAGTACTTTTCTACCATAGGGTTTACAGTGAGGTTCTGGAGG  600

seq1  AGTCACGAGCAATGGCAGTAGTCTATTGTTTGTGTGGAAGAAGAAGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACGAGCAATGGCAGTAGTCTATTGTTTGTGTGGAAGAAGAAGATCT  650

seq1  ATGTAACCCCACTGACCAGCAGCTCAAAAGGAGGAAACCTATACCCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACCCCACTGACCAGCAGCTCAAAAGGAGGAAACCTATACCCAGCA  700

seq1  CTGAGCCTGTTACCTGATACCTTATAGTCTGGGAGAGTTATTTCTCCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGTTACCTGATACCTTATAGTCTGGGAGAGTTATTTCTCCAAC  750

seq1  TACCCCAACTTGTAGATGTAAATGCATGTAATATAGAAAGCATCTGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCAACTTGTAGATGTAAATGCATGTAATATAGAAAGCATCTGCTGT  800

seq1  TTCCATCTTAAGAGACAGAAGTAGTGGACATCTGCAGTGAAACAGTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTAAGAGACAGAAGTAGTGGACATCTGCAGTGAAACAGTATTT  850

seq1  CCTCAGCATAACAGCAGTTACACACTTGAACTCATGGTCACTGGAGTGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCATAACAGCAGTTACACACTTGAACTCATGGTCACTGGAGTGGC  900

seq1  ATGTACAAGATTCATGTAAGGCAAACCAGTCAAAGTCTAAGCATAGTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAAGATTCATGTAAGGCAAACCAGTCAAAGTCTAAGCATAGTTAG  950

seq1  GAGAGCTCTCATAAAATCCCACCACCCAATAGTTAGAGAAGCTATTGGCA  1000
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  GAGAGCTCTCATAAAATCCCACCACCCAATAGTTAGAG-AGCTA-TGGCA  998

seq1  ACTGAAGACTTCTTTGGGTCAATTTTCTTCAGGATTGTGGACCCT-GAGG  1049
      |||||||||||||||||||||  |||| |||||| ||| |||||| ||||
seq2  ACTGAAGACTTCTTTGGGTCA--TTTC-TCAGGA-TGT-GACCCTGGAGG  1043

seq1  GGATATTTATGGTCCAGTAGAT-AGCCCTACATCTATGAACATATAGAAA  1098
      ||||| |||||||||||||||| |||| ||||||||||||||||||||||
seq2  GGATA-TTATGGTCCAGTAGATAAGCCTTACATCTATGAACATATAGAAA  1092

seq1  GCACTAAATGGGGTCAGTAGATGAGAGA  1126
      ||||| ||||||  |||| |||||||||
seq2  GCACTTAATGGGTCCAGT-GATGAGAGA  1119

seq1: chr14_121153617_121154721
seq2: B6Ng01-320B13.g_68_1182 (reverse)

seq1  AGTACACACCATTTTAACTTTGATTCTAACTTGTTCTA-CTTTGATAAAG  49
      ||||||||| |||||| ||||||||||||| ||||||| |||||||||||
seq2  AGTACACACAATTTTATCTTTGATTCTAAC-TGTTCTACCTTTGATAAAG  49

seq1  TTAGTCATGTCCTTTTAGAAATGTCA-TTCT-GGACCAAGTCTATTT-CT  96
      |||||||||||   |||||||||||| |||| ||||||||||||||| ||
seq2  TTAGTCATGTC---TTAGAAATGTCATTTCTGGGACCAAGTCTATTTCCT  96

seq1  GG-AACTCCTT--AATAAAGTG-AAGTAAATAATAAA--TATAAA-GCCA  139
      || ||||||||  | ||||||| ||||||||||||||   ||||| ||||
seq2  GGAAACTCCTTTAATTAAAGTGAAAGTAAATAATAAAATAATAAAGGCCA  146

seq1  -GGCAGTGGT-GGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGG  187
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGGTGGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGG  196

seq1  AGGCGGATCTCTGAGTTCGAGG-CCAGCCTGGTCTACAGAATGAGTTCCA  236
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGCGGATCTCTGAGTTCGAGGCCCAGCCTGGTCTACAGAATGAGTTCCA  246

seq1  GGACAGCCAGCACTACACAGAGAAACCCTGTCTCGAAAAACCAAATAATA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGCACTACACAGAGAAACCCTGTCTCGAAAAACCAAATAATA  296

seq1  ATAATAATAATAACAATAATAATAATAATAACAATAAGTGTAATAATTAC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAACAATAATAATAATAATAACAATAAGTGTAATAATTAC  346

seq1  CCAATAGAAGGGACAGATCTCATCTGATGCTGAGACAATTGGAAGAATAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGAAGGGACAGATCTCATCTGATGCTGAGACAATTGGAAGAATAT  396

seq1  GCTGCAGATATGAAAGTACCTTAATTCATCAATTTTTTTGGAGGGGGGGG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGATATGAAAGTACCTTAATTCATCAATTTTTTTGGAGGGGGGGG  446

seq1  GAGACAACATCAGCCAAAAACTCATGACCACATGAAGGGCTGAGTGCAGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACATCAGCCAAAAACTCATGACCACATGAAGGGCTGAGTGCAGC  496

seq1  GAGAAGGAGCAGGGGCTTTGGCTGGGCTCGTTTCCTCCTGCACAAATGTC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAGCAGGGGCTTTGGCTGGGCTCGTTTCCTCCTGCACAAATGTC  546

seq1  TAATGGAGGCCAGGAATGAACTGAGCTTCTGGAAAGACAAATGTTGGAAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAGGCCAGGAATGAACTGAGCTTCTGGAAAGACAAATGTTGGAAA  596

seq1  GAGGGGGACAAGGAAGTAAGGAAGCAGGAGGGTAGGGGATGCAGACACCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGACAAGGAAGTAAGGAAGCAGGAGGGTAGGGGATGCAGACACCA  646

seq1  GATCTGCGGAATGCTCTCCAACACGGGCTCTGTCCCGGGGCTTCATGTTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCGGAATGCTCTCCAACACGGGCTCTGTCCCGGGGCTTCATGTTT  696

seq1  ACATCATCCGTTTCCACAACATCTTCTGAGTGATGATAAATGTTCCGCAT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCCGTTTCCACAACATCTTCTGAGTGATGATAAATGTTCCGCAT  746

seq1  GCGCACGATGTCCCAGACATCGTCCTCAAAGCTCAGTCCTTCCTTCTGTC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACGATGTCCCAGACATCGTCCTCAAAGCTCAGTCCTTCCTTCTGTC  796

seq1  CTATGCTGAGAGACAGCGAGAGTCGTCATCACCAACATTGTCTAGGTTCC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGAGAGACAGCGAGAGTCGTCATCACCAACATTGTCTAGGTTCC  846

seq1  CCGTGTCACTGTGAGGATACTGAATCACAGAGAAGGTACAGACTGCCCAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTCACTGTGAGGATACTGAATCACAGAGAAGGTACAGACTGCCCAC  896

seq1  ACCAACAGGAAGGTGGGACAGAATAGGCCCCTTAGCAATCTGGTCCCAGA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGGAAGGTGGGACAGAATAGGCCCCTTAGCAATCTGGTCCCAGA  946

seq1  GTCTTCAACACTATGCCGCTGCTACGTCATCTACAGAGGCACTTTTTCAC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAACACTATGCCGCTGCTACGTCATCTACAGAGGCACTTTTTCAC  996

seq1  TCTCCTGGAACCAAATTGTGCCTCTTGCAGAAAACTAGTTCAATCCAATA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGAACCAAATTGTGCCTCTTGCAGAAAACTAGTTCAATCCAATA  1046

seq1  TGAGACAAAGACTTCTAAGAAAGTACCAAGCCCGGCATAAAAGAGCCTCC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAAAGACTTCTAAGAAAGTACCAAGCCCGGCATAAAAGAGCCTCC  1096

seq1  CGCACAAGGCAGTGAATTC  1105
      |||||||||||||||||||
seq2  CGCACAAGGCAGTGAATTC  1115