BAC Information

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BAC

Clone NameB6Ng01-320I04
Chromosome14 (Build37)
Map Location 113,933,928 - 114,070,339
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320I04.bB6Ng01-320I04.g
ACCGA109859GA109860
length1,078918
definitionB6Ng01-320I04.b B6Ng01-320I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,069,256 - 114,070,339)(113,933,928 - 113,934,596)
sequence
gaattccaattgagtaatgcttttatatgattggcatgtttgaaaactta
tgagctattttcttgctggtgattgatgtgagaagacccacatcactatg
tgcagtacttcccctgaggccttggtcttggcttttgtttcttcatgatc
tctgcttcagatcctgcctccaacctagctttgagttcctgccctgactt
tcttcagtgatggagatgttttgtgacctgaaacttgtaagctaagatac
atttgtttttgttttttttttccctgggttgattttggccactgtgtttg
atttcagaactaggaaccctaagagaggaagcccattcaagaataggatt
tgtgctggaatgaaaaacagctttaatttttcaaattttccatttaataa
acaagtaatggagagtattggtaatatattatctgtttacctaggacgta
caatgtaaaaacaataaatacaataaacagcaaatataatgtcttcttgc
tcatcctttcttttaatgctatcatgttgcacattcatttggaaaaatat
ttttatgtttgtaaaatacgtgtattataacaaataaatttttatgtcac
ataagcatctaatgttagttaacataaataaatctcattatttctcatag
ttttttttttattttaatgacataatcattgcacatcttagtctatttga
ccaagatttctttgactatcaggaatgttttgtggctttgcatgtattca
aatattgtttaactactagatatttagatatgctataaactagtttaaaa
ttaaaattactctttgtaaagtctgtatatagaactcctttggtattgtt
ttaattaaaaaataatcataaactatcacacaaaatctatgctataaagg
tatagtattgaggagacatgacaataaaacattacagagtgttacaggtt
cagttatgatgccatccctcccaggtggtcccttacattcctgctctttt
ttctcagctgtgctttctgtccccatcagtaccccttctgttccttattt
atgtgttttttttcttctgagttccttg

gaattcacatctttgaacttgtaagcgtgaatgacaagaggtagagataa
ttctaagttttccatcaagacaacttcttttgaagtatatatatatattt
atatatcttaatatgaaatatatatttatatatttataaaatcatcatga
tttttatagatatcactaaaccagaaggcaggaagttgtgctattgaagg
acatccttggctacagagtgaattctaggacagtataggatacaggagaa
cttttcttaagaaaaaaaattaaaagaaataaaaacatttaaatttatat
ataatgtgggctagagagattgctcagatattaagaacactgctcttatg
ctcatgttcatagcagccttatttataatagccagaagctggtaagaacc
cagatgcccctcaacagaggaatggatacaaaaaatgtgttacatttaca
caatggagtactactcagctattaaaaagaacgaatttatgaaattccta
ggcaaatggatggacctggagggcatcatcctgagtgaggtaacccaatc
acaaaagaactcaaatgatatgtactcactgataagtggatattagccca
gaaacttagtatacccgagatataagatacaatttgcaaaacacatgaaa
cagaagaagaacaaagaccaaagtgtggacactttgccccttcttagaat
tggaaacaatcacccatggaaggagttacagagacaaagtttggagctga
gacaaaaagatggaccatctagagactgccatatccaggcatccatccca
taatttagcctccaaacgatgacaccattgcatacactagcaaacgtttg
gctgaaaggactcctgatatagctgtctcttgtgagactaggccagggcc
ctagcaaaacacagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114069256_114070339
seq2: B6Ng01-320I04.b_49_1126 (reverse)

seq1  CAAGAGAACTCAGAAGAAAAAAAAACACATAAAATAAGAAACAAGAAGGG  50
      |||| ||||||||||| ||||||||||||| ||||||| ||| |||||||
seq2  CAAG-GAACTCAGAAG-AAAAAAAACACAT-AAATAAGGAAC-AGAAGGG  46

seq1  GTACCTGATGGGGACAGAAAGGCACAGCTGAG-AAAAAGAGCAGGAATGT  99
      ||| |||||||||||||||| ||||||||||| |||||||||||||||||
seq2  GTA-CTGATGGGGACAGAAA-GCACAGCTGAGAAAAAAGAGCAGGAATGT  94

seq1  AAGGGACCACCTGGGAGGGATGGCATCATAACTGAACCTGTAACACTCTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCACCTGGGAGGGATGGCATCATAACTGAACCTGTAACACTCTG  144

seq1  TAATGTTTTATTGTCATTGTCTCCTCAATACTATACCTTTATAGCATAGA  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAATGTTTTATTGTCA-TGTCTCCTCAATACTATACCTTTATAGCATAGA  193

seq1  TTTTGTGTGATAGTTTATGATTATTTTTTAATTAAAACAATACCAAAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTGATAGTTTATGATTATTTTTTAATTAAAACAATACCAAAGGA  243

seq1  GTTCTATATACAGACTTTACAAAGAGTAATTTTAATTTTAAACTAGTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATATACAGACTTTACAAAGAGTAATTTTAATTTTAAACTAGTTTA  293

seq1  TAGCATATCTAAATATCTAGTAGTTAAACAATATTTGAATACATGCAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATCTAAATATCTAGTAGTTAAACAATATTTGAATACATGCAAAG  343

seq1  CCACAAAACATTCCTGATAGTCAAAGAAATCTTGGTCAAATAGACTAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAACATTCCTGATAGTCAAAGAAATCTTGGTCAAATAGACTAAGA  393

seq1  TGTGCAATGATTATGTCATTAAAATAAAAAAAAAACTATGAGAAATAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAATGATTATGTCATTAAAATAAAAAAAAAACTATGAGAAATAATG  443

seq1  AGATTTATTTATGTTAACTAACATTAGATGCTTATGTGACATAAAAATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTTATGTTAACTAACATTAGATGCTTATGTGACATAAAAATTT  493

seq1  ATTTGTTATAATACACGTATTTTACAAACATAAAAATATTTTTCCAAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTATAATACACGTATTTTACAAACATAAAAATATTTTTCCAAATG  543

seq1  AATGTGCAACATGATAGCATTAAAAGAAAGGATGAGCAAGAAGACATTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCAACATGATAGCATTAAAAGAAAGGATGAGCAAGAAGACATTAT  593

seq1  ATTTGCTGTTTATTGTATTTATTGTTTTTACATTGTACGTCCTAGGTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGTTTATTGTATTTATTGTTTTTACATTGTACGTCCTAGGTAAA  643

seq1  CAGATAATATATTACCAATACTCTCCATTACTTGTTTATTAAATGGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATATATTACCAATACTCTCCATTACTTGTTTATTAAATGGAAAA  693

seq1  TTTGAAAAATTAAAGCTGTTTTTCATTCCAGCACAAATCCTATTCTTGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAATTAAAGCTGTTTTTCATTCCAGCACAAATCCTATTCTTGAA  743

seq1  TGGGCTTCCTCTCTTAGGGTTCCTAGTTCTGAAATCAAACACAGTGGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTCCTCTCTTAGGGTTCCTAGTTCTGAAATCAAACACAGTGGCCA  793

seq1  AAATCAACCCAGGGAAAAAAAAAACAAAAACAAATGTATCTTAGCTTACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACCCAGGGAAAAAAAAAACAAAAACAAATGTATCTTAGCTTACA  843

seq1  AGTTTCAGGTCACAAAACATCTCCATCACTGAAGAAAGTCAGGGCAGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGGTCACAAAACATCTCCATCACTGAAGAAAGTCAGGGCAGGAA  893

seq1  CTCAAAGCTAGGTTGGAGGCAGGATCTGAAGCAGAGATCATGAAGAAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCTAGGTTGGAGGCAGGATCTGAAGCAGAGATCATGAAGAAACA  943

seq1  AAAGCCAAGACCAAGGCCTCAGGGGAAGTACTGCACATAGTGATGTGGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAGACCAAGGCCTCAGGGGAAGTACTGCACATAGTGATGTGGGT  993

seq1  CTTCTCACATCAATCACCAGCAAGAAAATAGCTCATAAGTTTTCAAACAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCACATCAATCACCAGCAAGAAAATAGCTCATAAGTTTTCAAACAT  1043

seq1  GCCAATCATATAAAAGCATTACTCAATTGGAATTC  1084
      |||||||||||||||||||||||||||||||||||
seq2  GCCAATCATATAAAAGCATTACTCAATTGGAATTC  1078


seq1: chr14_113933928_113934596
seq2: B6Ng01-320I04.g_65_733

seq1  GAATTCACATCTTTGAACTTGTAAGCGTGAATGACAAGAGGTAGAGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTTTGAACTTGTAAGCGTGAATGACAAGAGGTAGAGATAA  50

seq1  TTCTAAGTTTTCCATCAAGACAACTTCTTTTGAAGTATATATATATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGTTTTCCATCAAGACAACTTCTTTTGAAGTATATATATATATTT  100

seq1  ATATATCTTAATATGAAATATATATTTATATATTTATAAAATCATCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTTAATATGAAATATATATTTATATATTTATAAAATCATCATGA  150

seq1  TTTTTATAGATATCACTAAACCAGAAGGCAGGAAGTTGTGCTATTGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAGATATCACTAAACCAGAAGGCAGGAAGTTGTGCTATTGAAGG  200

seq1  ACATCCTTGGCTACAGAGTGAATTCTAGGACAGTATAGGATACAGGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTGGCTACAGAGTGAATTCTAGGACAGTATAGGATACAGGAGAA  250

seq1  CTTTTCTTAAGAAAAAAAATTAAAAGAAATAAAAACATTTAAATTTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTAAGAAAAAAAATTAAAAGAAATAAAAACATTTAAATTTATAT  300

seq1  ATAATGTGGGCTAGAGAGATTGCTCAGATATTAAGAACACTGCTCTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGGGCTAGAGAGATTGCTCAGATATTAAGAACACTGCTCTTATG  350

seq1  CTCATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGTAAGAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGTAAGAACC  400

seq1  CAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGTTACATTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGTTACATTTACA  450

seq1  CAATGGAGTACTACTCAGCTATTAAAAAGAACGAATTTATGAAATTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGTACTACTCAGCTATTAAAAAGAACGAATTTATGAAATTCCTA  500

seq1  GGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATC  550

seq1  ACAAAAGAACTCAAATGATATGTACTCACTGATAAGTGGATATTAGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAACTCAAATGATATGTACTCACTGATAAGTGGATATTAGCCCA  600

seq1  GAAACTTAGTATACCCGAGATATAAGATACAATTTGCAAAACACATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTAGTATACCCGAGATATAAGATACAATTTGCAAAACACATGAAA  650

seq1  CAGAAGAAGAACAAAGACC  669
      |||||||||||||||||||
seq2  CAGAAGAAGAACAAAGACC  669


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