BAC Information

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BAC

Clone NameB6Ng01-320P22
Chromosome14 (Build37)
Map Location 93,049,087 - 93,050,247
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665377, LOC638252
Downstream genePcdh9, LOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P22.bB6Ng01-320P22.g
ACCGA110222GA110223
length1,1981,151
definitionB6Ng01-320P22.b B6Ng01-320P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaactcaggttacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggatatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggtaaa
tggatggacctggagggcatcatcctgtgtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatatccaggatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggaggtacagagacaaagtttggagctgagataaa
aagatggaccatgtagagactgccatatccggggatccatcccataatca
gcttccaaatgctgacaccattacatacactagcaagattatgctgaaag
gaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaca
tagaagtggatgctcacagtcggctattgggatggatcacatgcccccat
gaaggagctagagaaagtactccaagaagctaaagggatctgcatcctat
aggtggaacaacattatgaactaacagtacccggaactctgactctagct
gcatatgtatcaaaagatgcctagttcgcaatcactgaaagagagtccat
gaacacgcaacttttatatgcctcagtacatgggacgccgagtaaagaat
gggtgggcttaacgcatgcggtctgatagctacgtgacacaactgacg
gaattctaaaaaattgtcaattattttcctaaaataaaattagcttcaga
gaattttcttatcaacaaccaaagacagctaataatgttttaattgatat
aagaaatagttttataaaagagtctagaattaaagagaatttagaatgaa
tttttgacttagagttttaaggcaattgtttggttggtatcatttttaga
aaaatttgcaatatcttatacaaagtagtagataattctttaagttattc
aaaaaaactacttagtttgaaatgactattatatcatagagctttaataa
tagacactgttggaaactatggtacaatatagttatcttaatttgttgaa
gaggttaaaattacttaaattattgaacaaaaaatactttgggaaacatg
agatttcttctttcaacaacagtttaaactaatggtctaccagatgtaaa
atctaagtatggcgagtactgaattataattcacatttacagcaagtata
gatattttcatgtgaaaattgggcattgtttgggaagtagtaggaaacta
agaaatttattgaagacatttggtctctgaatattcccaatataccaact
atattgagccatctttcccagcagtaaagccattctacctatattatatg
attcttctcttgaaaattgtacaatgactatgatagtagtcatctaagga
agagatgccaaattttctcattttcaacttaatatcactcattttgcatt
cagacttagattctacctagatgtattttggaatttcctgtggaaatgta
taatatttttgtacattgtacaatataccagattcactaagaaaattctc
cctaaaaaagtattactgatacatagaccccagttttaatattttcacac
acatacacaggcatacacacaggcatacacacatccatcaccaccactac
taccatcaaaaccaccacacatacacatcaatatgttatgatgttcatta
tctacgtataaataaaaatattgtttaagttgtgggttactatggacagg
agactgtagatattgtgtattactagagatttaaacatctcatgctatga
cctaaatttcttaattgtgcttacgataagaaatggttccacatttaaat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93049087_93050247
seq2: B6Ng01-320P22.g_67_1217

seq1  GAATTCTAAAAAATTGTCAATTATTTTCCTAAAATAAAATTAGCTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAAAATTGTCAATTATTTTCCTAAAATAAAATTAGCTTCAGA  50

seq1  GAATTTTCTTATCAACAACCAAAGACAGCTAATAATGTTTTAATTGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTTATCAACAACCAAAGACAGCTAATAATGTTTTAATTGATAT  100

seq1  AAGAAATAGTTTTATAAAAGAGTCTAGAATTAAAGAGAATTTAGAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGTTTTATAAAAGAGTCTAGAATTAAAGAGAATTTAGAATGAA  150

seq1  TTTTTGACTTAGAGTTTTAAGGCAATTGTTTGGTTGGTATCATTTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGACTTAGAGTTTTAAGGCAATTGTTTGGTTGGTATCATTTTTAGA  200

seq1  AAAATTTGCAATATCTTATACAAAGTAGTAGATAATTCTTTAAGTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGCAATATCTTATACAAAGTAGTAGATAATTCTTTAAGTTATTC  250

seq1  AAAAAAACTACTTAGTTTGAAATGACTATTATATCATAGAGCTTTAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTACTTAGTTTGAAATGACTATTATATCATAGAGCTTTAATAA  300

seq1  TAGACACTGTTGGAAACTATGGTACAATATAGTTATCTTAATTTGTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTGTTGGAAACTATGGTACAATATAGTTATCTTAATTTGTTGAA  350

seq1  GAGGTTAAAATTACTTAAATTATTGAACAAAAAATACTTTGGGAAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAAAATTACTTAAATTATTGAACAAAAAATACTTTGGGAAACATG  400

seq1  AGATTTCTTCTTTCAACAACAGTTTAAACTAATGGTCTACCAGATGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTCTTTCAACAACAGTTTAAACTAATGGTCTACCAGATGTAAA  450

seq1  ATCTAAGTATGGCGAGTACTGAATTATAATTCACATTTACAGCAAGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGTATGGCGAGTACTGAATTATAATTCACATTTACAGCAAGTATA  500

seq1  GATATTTTCATGTGAAAATTGGGCATTGTTTGGGAAGTAGTAGGAAACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCATGTGAAAATTGGGCATTGTTTGGGAAGTAGTAGGAAACTA  550

seq1  AGAAATTTATTGAAGACATTTGGTCTCTGAATATTCCCAATATACCAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTATTGAAGACATTTGGTCTCTGAATATTCCCAATATACCAACT  600

seq1  ATATTGAGCCATCTTTCCCAGCAGTAAAGCCATTCTACCTATATTATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGCCATCTTTCCCAGCAGTAAAGCCATTCTACCTATATTATATG  650

seq1  ATTCTTCTCTTGAAAATTGTACAATGACTATGATAGTAGTCATCTAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTCTTGAAAATTGTACAATGACTATGATAGTAGTCATCTAAGGA  700

seq1  AGAGATGCCAAATTTTCTCATTTTCAACTTAATATCACTCATTTTGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCCAAATTTTCTCATTTTCAACTTAATATCACTCATTTTGCATT  750

seq1  CAGACTTAGATTCTACCTAGATGTATTTTGGAATTTCCTGTGGAAATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTAGATTCTACCTAGATGTATTTTGGAATTTCCTGTGGAAATGTA  800

seq1  TAATATTTTTGTACATTGTACAATATACCAGATTCACTAAGAAAATTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTTGTACATTGTACAATATACCAGATTCACTAAGAAAATTCTC  850

seq1  CCTAAAAAAGTATTACTGATACATAGACCCCAGTTTTAATATTTTCACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAAAGTATTACTGATACATAGACCCCAGTTTTAATATTTTCACAC  900

seq1  ACATACACAGGCATACACACAGGCATACACACATCCCATCACCACCACTA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACATACACAGGCATACACACAGGCATACACACAT-CCATCACCACCACTA  949

seq1  CTACCATCAAAAACCACCACACATACACATCAAATATGTTTATTTATG-T  999
      |||||||| |||||||||||||||||||||| ||||||     ||||| |
seq2  CTACCATC-AAAACCACCACACATACACATC-AATATG-----TTATGAT  992

seq1  TTTCATTATCTACGTATAAAT-AAAATATGTTTAAAGTTGTGGG-TACTA  1047
       |||||||||||||||||||| |||||||  || |||||||||| |||||
seq2  GTTCATTATCTACGTATAAATAAAAATATTGTTTAAGTTGTGGGTTACTA  1042

seq1  TGGACA-GAGACTGTAGATATTGTGTATTAATTAGAGAATTTTAAAACAT  1096
      |||||| |||||||||||||||||||||| | ||||||   || ||||||
seq2  TGGACAGGAGACTGTAGATATTGTGTATT-ACTAGAGA---TTTAAACAT  1088

seq1  CTCATGGTTATTGACCTAAATTTCTTTATATGTAGATAAAGATAAGAAAT  1146
      |||||| |   ||||||||||||||| || ||| | | | ||||||||||
seq2  CTCATGCT--ATGACCTAAATTTCTTAAT-TGT-GCTTACGATAAGAAAT  1134

seq1  G--TTCACATTAAAATA  1161
      |  | |||||| |||||
seq2  GGTTCCACATTTAAATA  1151