BAC Information

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BAC

Clone NameB6Ng01-320P23
Chromosome14 (Build37)
Map Location 88,105,425 - 88,106,301
singlet/doubletsinglet
Overlap genenone
Upstream geneDiap3, EG665324, Tdrd3
Downstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P23.bB6Ng01-320P23.g
ACCGA110224GA110225
length8771,160
definitionB6Ng01-320P23.b B6Ng01-320P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctggaactggaataacgtagtcataatccatatcttctggatg
ccaaggtctgaactagggttttctgcaagagcagcaagtactcttaacca
ccaagcaatctctccagtcactggcatggtgttctttggctttctcgctg
gatctcctgcttggtcatcactgtaataatttcaattgccatcagcaaaa
ctgactcttaatttccatatagagcttcagtctgtcacctgtccttcaat
tgcagctcattgctgcccttcttggaatttctgtaacacccctgagaacc
atcaacagtggatcctatcaacccatcaaaggagttgtgagtatcataga
tactttctcctttggggaaaaaaataataaaagtaagaattactaagtaa
attgaagggggaaagagaacggaggcaattaaaggttttgttcgtgtgct
ggttttttactccctatattctcaaggtcaagctcttctttcctataacc
aacttgtgtttcttaatagttggagagacaaaatgtggtaccttctcttg
tgaaacaatggtacagaggatgtatccaggggaagatattatggaggctt
gtatctgtaaaaagttaatgaggtggtggagaccggaagaaggactataa
cttataacctaaactataacttattactcctaatacacagaaactaatat
acatatgcagctagagctatgagtcccatcatgtgttttctttggttggt
gatttagtcccagggaactggttagttcatattgctgttcctcctatggg
gctgcaaaccccttcatctccttgggttctttctctagggtcaggaagca
ggagtgggtgggttggtgagcagggtg

gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccacgttcttgagttctttatatttattggatattagtcccc
tatccgatttgggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgctttacagaagctttgcagtttcat
gaggtcccagttgtcaattcttgatcttacacacaagccattgctgttct
attcaggaatttttcccctgtgccaatatcttcgaggcttttccgcactt
tctcctctaaatttcattgtctctggttttatgtggagttccttgatcca
gttagatttgacattagtacaaggagataaaaatggatttgttgctctgt
agtaaagctttaggtcaggcatggtgatttcaccagaggttcttttatcc
ttgagaagagtttttgctatcctaggttttttgttattccagatgaaggt
accccggggctggtgtggattgggagagacccccactttctattctatta
gttttagttttagtgtctgctttcatgttgaagtctttgatccatttgca
ctagagttttgtggaaagtgatagatatgtgtttatttgcattcttcttc
atgcaaacatccacataaaccaacaccatttgttgaagatgctttctttt
ttctgttgcatggttttggctttttcaagtgtccataggtatgtggattt
atttctgggtctttgattcaattccattgatcaacctgtctctttttaat
gccaataccatgggtttttttctttttttgttgttgttattttgtttttt
gtttttattactattgctctgggaatacaggttgaaatcagggatggtgc
tacctctagaagttacttttattatatagggctattttaacttttcctgg
gttttttgtttttccatatgaagttgagtattgttttttcaagtctgtaa
aaaattgtgtggatttttgatggatgcattgatctgtggatttctattac
cagatggccattttttcctatgttaatcgtactgaatccattcaagatgg
ccagtctttcatctctgaattcggactcaattcttttctcaggacctgag
agtaatatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_88105425_88106301
seq2: B6Ng01-320P23.b_45_921 (reverse)

seq1  CACCCTGCTCACCAACCCACCCACTCCTGCTTCCTGACCCTAGAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCTCACCAACCCACCCACTCCTGCTTCCTGACCCTAGAGAAAGA  50

seq1  ACCCAAGGAGATGAAGGGGTTTGCAGCCCCATAGGAGGAACAGCAATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGGAGATGAAGGGGTTTGCAGCCCCATAGGAGGAACAGCAATATG  100

seq1  AACTAACCAGTTCCCTGGGACTAAATCACCAACCAAAGAAAACACATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCAGTTCCCTGGGACTAAATCACCAACCAAAGAAAACACATGAT  150

seq1  GGGACTCATAGCTCTAGCTGCATATGTATATTAGTTTCTGTGTATTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCATAGCTCTAGCTGCATATGTATATTAGTTTCTGTGTATTAGGA  200

seq1  GTAATAAGTTATAGTTTAGGTTATAAGTTATAGTCCTTCTTCCGGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGTTATAGTTTAGGTTATAAGTTATAGTCCTTCTTCCGGTCTCC  250

seq1  ACCACCTCATTAACTTTTTACAGATACAAGCCTCCATAATATCTTCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTCATTAACTTTTTACAGATACAAGCCTCCATAATATCTTCCCCT  300

seq1  GGATACATCCTCTGTACCATTGTTTCACAAGAGAAGGTACCACATTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATCCTCTGTACCATTGTTTCACAAGAGAAGGTACCACATTTTGT  350

seq1  CTCTCCAACTATTAAGAAACACAAGTTGGTTATAGGAAAGAAGAGCTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAACTATTAAGAAACACAAGTTGGTTATAGGAAAGAAGAGCTTGA  400

seq1  CCTTGAGAATATAGGGAGTAAAAAACCAGCACACGAACAAAACCTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGAATATAGGGAGTAAAAAACCAGCACACGAACAAAACCTTTAAT  450

seq1  TGCCTCCGTTCTCTTTCCCCCTTCAATTTACTTAGTAATTCTTACTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCGTTCTCTTTCCCCCTTCAATTTACTTAGTAATTCTTACTTTTA  500

seq1  TTATTTTTTTCCCCAAAGGAGAAAGTATCTATGATACTCACAACTCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTCCCCAAAGGAGAAAGTATCTATGATACTCACAACTCCTTT  550

seq1  GATGGGTTGATAGGATCCACTGTTGATGGTTCTCAGGGGTGTTACAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTGATAGGATCCACTGTTGATGGTTCTCAGGGGTGTTACAGAAA  600

seq1  TTCCAAGAAGGGCAGCAATGAGCTGCAATTGAAGGACAGGTGACAGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGAAGGGCAGCAATGAGCTGCAATTGAAGGACAGGTGACAGACTG  650

seq1  AAGCTCTATATGGAAATTAAGAGTCAGTTTTGCTGATGGCAATTGAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTATATGGAAATTAAGAGTCAGTTTTGCTGATGGCAATTGAAATT  700

seq1  ATTACAGTGATGACCAAGCAGGAGATCCAGCGAGAAAGCCAAAGAACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTGATGACCAAGCAGGAGATCCAGCGAGAAAGCCAAAGAACACC  750

seq1  ATGCCAGTGACTGGAGAGATTGCTTGGTGGTTAAGAGTACTTGCTGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGTGACTGGAGAGATTGCTTGGTGGTTAAGAGTACTTGCTGCTCT  800

seq1  TGCAGAAAACCCTAGTTCAGACCTTGGCATCCAGAAGATATGGATTATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAACCCTAGTTCAGACCTTGGCATCCAGAAGATATGGATTATGA  850

seq1  CTACGTTATTCCAGTTCCAGGGAATTC  877
      |||||||||||||||||||||||||||
seq2  CTACGTTATTCCAGTTCCAGGGAATTC  877


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