BAC Information

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BAC

Clone NameB6Ng01-321K17
Chromosome14 (Build37)
Map Location 35,689,751 - 35,797,898
singlet/doubletdoublet
Overlap geneGrid1
Upstream geneGdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341
Downstream gene4930596D02Rik, LOC100040277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321K17.bB6Ng01-321K17.g
ACCGA110713GA110714
length1,1831,153
definitionB6Ng01-321K17.b B6Ng01-321K17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,689,751 - 35,690,933)(35,796,730 - 35,797,898)
sequence
gaattcctttccacattgttttgttgatggttgcttctaatacattaaat
tctcagtgtaattaggtctatttctggatttttaaattccgatccttatt
tctattttggtgtgagttctccagtaccctgattattatcgctttataat
attttcatatctgcttcccttacagttctttttctttccagaattttagc
taactttctcatctgtttattttcaaaattattttagaataagtttattc
aattccttaaagaaatccttttgagatttttgagtgggattgaattaaat
ttataaattaagttttggggaaattgtcatctttataacatgcagtctta
tcatctgggagcagttattttctctatttattcaaaaatattttataact
ctctattaaagtttagtggccttatgtaggtcacacacagctctagtggc
gctcattgctgagtgcttgtgttccttgttgcctctttatgtgaggcctc
cttgttcatttccccatgatcacagcacaaggttcctaaaaattcaaaat
ctgagggctccagactccgaagtctgagcataggcgtcaagatatcacaa
gtagaaaactctacaccatgaaactttatttcatctacaaaattattaaa
gatgttatataagttacactcagtttatgtgaatatgatgcataaaacac
ataaacaggttttatgctgcgtcttggatcccattctcctattttcttat
tatgtagatatgcaaagatttccagatccaataaaaatccagattccgag
acaccactgacaacagctactcagtccatctgtgagagaatagttcattt
ttaaaatcacctttttatttatcatagaaaccaaacagcaatggtaactg
cagaattaaaaagaaaactgaagcgcctcccacagtctccccggctttta
taaaggggcttaaatttttctgtggttccattgagagcttgtctgtgagc
agatgataggcacagctgtggccacagtggcaggcctctttaatatccac
agcttcttgtatgtcatctctaatggttgctctaccacagaagtttgtcc
ctggctcatttatgggtggagtgacggcactgaaatggctggttcaggac
acggattgaggtgctagagaaaaaacagccact
gaattcctgtgtagaacgccgtcccctcctcaaatgaggctagagttgtg
ctgattggacattagagcagagggaggggggagaagctagaaggctgtag
acacaggaagatgtttcacggttcattatgcctaagctaactgtggaata
aatgtggcctgtgctaagcctccttaatatgagctctgtcattctcagca
gtcctctttgtcactgtcatcttactaccattaactgaacctcagggtcc
ggcttaatgatgctttacagatgtcctctcacacggtcctcataggaatg
ctgtaaggtctgtattgctatcccattttgcctgagatagctaaggcttg
ggaaaaatgaataaaatcactcagtgctatgcctagtgtcctagcagtac
ttgccaccaggacaacacaactcctagtgccccaggagaagctggcctac
ctgacatataagtttagatagaaacaaagtcctacgcatattcttccaag
ccaaggattttacaggatcaaggtacagtccccatcagtccctgtagctg
tgtctccattcctggtgtaccacctctgtgtctagcttcatcattagagc
agagcagactgctgctctttatctagtacctctcactacccagaagcaat
cctggaccaggccccagttttagcatctcatacatcagactcagaactct
ccagcctttatgcggggaaatctatgggtattcccacagactctcccttc
tactaaaccaagggatcttggacactgcaggaaggtaaaggaggggtggc
attccccaacccagaggggaaaatacctgaaagctaaaatgtcactcaga
gaagactccctcactccagagctcaggatctcccacaagcccctgcgcca
tcttgtaaaaataaatggccattccaactgtcctggtactacagtgatgg
tgaatctggggttaatcaggagtaaatccctctgcatggtgtgaagatct
gagccagcatccacatgctctgtgaagctatccttcctctggtgctcagt
ctgagtctgtcagaagagcaccaccaatgaaagccatgtaaaagcacaac
aataactgcactcaaatattagcacatggcctcggtcaacacataaacat
gca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35689751_35690933
seq2: B6Ng01-321K17.b_44_1226

seq1  GAATTCCTTTCCACATTGTTTTGTTGATGGTTGCTTCTAATACATTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCCACATTGTTTTGTTGATGGTTGCTTCTAATACATTAAAT  50

seq1  TCTCAGTGTAATTAGGTCTATTTCTGGATTTTTAAATTCCGATCCTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGTAATTAGGTCTATTTCTGGATTTTTAAATTCCGATCCTTATT  100

seq1  TCTATTTTGGTGTGAGTTCTCCAGTACCCTGATTATTATCGCTTTATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTGGTGTGAGTTCTCCAGTACCCTGATTATTATCGCTTTATAAT  150

seq1  ATTTTCATATCTGCTTCCCTTACAGTTCTTTTTCTTTCCAGAATTTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATATCTGCTTCCCTTACAGTTCTTTTTCTTTCCAGAATTTTAGC  200

seq1  TAACTTTCTCATCTGTTTATTTTCAAAATTATTTTAGAATAAGTTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCTCATCTGTTTATTTTCAAAATTATTTTAGAATAAGTTTATTC  250

seq1  AATTCCTTAAAGAAATCCTTTTGAGATTTTTGAGTGGGATTGAATTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTAAAGAAATCCTTTTGAGATTTTTGAGTGGGATTGAATTAAAT  300

seq1  TTATAAATTAAGTTTTGGGGAAATTGTCATCTTTATAACATGCAGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATTAAGTTTTGGGGAAATTGTCATCTTTATAACATGCAGTCTTA  350

seq1  TCATCTGGGAGCAGTTATTTTCTCTATTTATTCAAAAATATTTTATAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGGAGCAGTTATTTTCTCTATTTATTCAAAAATATTTTATAACT  400

seq1  CTCTATTAAAGTTTAGTGGCCTTATGTAGGTCACACACAGCTCTAGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTAAAGTTTAGTGGCCTTATGTAGGTCACACACAGCTCTAGTGGC  450

seq1  GCTCATTGCTGAGTGCTTGTGTTCCTTGTTGCCTCTTTATGTGAGGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTGCTGAGTGCTTGTGTTCCTTGTTGCCTCTTTATGTGAGGCCTC  500

seq1  CTTGTTCATTTCCCCATGATCACAGCACAAGGTTCCTAAAAATTCAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCATTTCCCCATGATCACAGCACAAGGTTCCTAAAAATTCAAAAT  550

seq1  CTGAGGGCTCCAGACTCCGAAGTCTGAGCATAGGCGTCAAGATATCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGCTCCAGACTCCGAAGTCTGAGCATAGGCGTCAAGATATCACAA  600

seq1  GTAGAAAACTCTACACCATGAAACTTTATTTCATCTACAAAATTATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAACTCTACACCATGAAACTTTATTTCATCTACAAAATTATTAAA  650

seq1  GATGTTATATAAGTTACACTCAGTTTATGTGAATATGATGCATAAAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATATAAGTTACACTCAGTTTATGTGAATATGATGCATAAAACAC  700

seq1  ATAAACAGGTTTTATGCTGCGTCTTGGATCCCATTCTCCTATTTTCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGGTTTTATGCTGCGTCTTGGATCCCATTCTCCTATTTTCTTAT  750

seq1  TATGTAGATATGCAAAGATTTCCAGATCCAATAAAAATCCAGATTCCGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGATATGCAAAGATTTCCAGATCCAATAAAAATCCAGATTCCGAG  800

seq1  ACACCACTGACAACAGCTACTCAGTCCATCTGTGAGAGAATAGTTCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACTGACAACAGCTACTCAGTCCATCTGTGAGAGAATAGTTCATTT  850

seq1  TTAAAATCACCTTTTTATTTATCATAG-AACCAAACAGCAATGGTAACTG  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTAAAATCACCTTTTTATTTATCATAGAAACCAAACAGCAATGGTAACTG  900

seq1  CAGAATTAAAAAGAAAACTGAAGCGCCTCCCACAGTCTCCCCGGC-TTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGAATTAAAAAGAAAACTGAAGCGCCTCCCACAGTCTCCCCGGCTTTTA  950

seq1  TAAGGGGGCTT-AATTTTTCTGTGGTTCCATTGAGAGCTTGTCTGTGAGC  997
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGCTTAAATTTTTCTGTGGTTCCATTGAGAGCTTGTCTGTGAGC  1000

seq1  AGATGATAGGCACAGCTGTGGCCACAGTGGCAAGCCTCTTT-ATATCCCA  1046
      |||||||||||||||||||||||||||||||| |||||||| |||| |||
seq2  AGATGATAGGCACAGCTGTGGCCACAGTGGCAGGCCTCTTTAATAT-CCA  1049

seq1  CAGCCTCTTGTATGTCATCTCTTAATTGTTTGCCTTCTTACCACAGAGTT  1096
      |||| |||||||||||||||||  | || ||||  || |||||||||  |
seq2  CAGCTTCTTGTATGTCATCTCT--AATGGTTGC--TC-TACCACAGAAGT  1094

seq1  TTGTCCCTGGCTTCATTTAGTGGT-GAGTGACGGGCACTGAA--TGCTGG  1143
      ||||||||||| |||||||  ||| ||||||| |||||||||   |||||
seq2  TTGTCCCTGGC-TCATTTATGGGTGGAGTGAC-GGCACTGAAATGGCTGG  1142

seq1  TTCCCAGG-CACGTATGAAGGTGCTAGAG--AAGGCAGCCACT  1183
      ||  |||| |||| ||  |||||||||||  ||  ||||||||
seq2  TT--CAGGACACGGATTGAGGTGCTAGAGAAAAAACAGCCACT  1183

seq1: chr14_35796730_35797898
seq2: B6Ng01-321K17.g_66_1218 (reverse)

seq1  TGCATGTTTATGTGTGTGTGCGCGAGCGCATGTGCCTATATATGTGAGTG  50
      |||||||||||||||   ||  ||||  |||||| ||| |||| ||||||
seq2  TGCATGTTTATGTGT---TGACCGAGGCCATGTG-CTA-ATATTTGAGTG  45

seq1  CATGTATATGTGTGCTTTTCCAATTGCCTTTCA-TGGTGGTGCTC-TCTG  98
      ||  |||   ||||||||| ||  || |||||| ||||||||||| ||||
seq2  CAGTTATTGTTGTGCTTTTACA--TGGCTTTCATTGGTGGTGCTCTTCTG  93

seq1  ACAGACTCAGACCTGAAGCACCAGAGGAAGGATAGCTTCACAGAGCATGG  148
      ||||||||||| ||| |||||||||||||||||||||||||||||||| |
seq2  ACAGACTCAGA-CTG-AGCACCAGAGGAAGGATAGCTTCACAGAGCAT-G  140

seq1  TGGATGCTTGGCTCAGAATCCTTCCACACCATGCAGAGGGATTTTACTCC  198
      ||||||| |||||||| |||  | ||||||||||||||||| ||||||||
seq2  TGGATGC-TGGCTCAG-ATC--TTCACACCATGCAGAGGGA-TTTACTCC  185

seq1  TGATTAACCCCAGATTCACCATCAACTGTAGTACCCAGGACAGTTGGAAT  248
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  TGATTAACCCCAGATTCACCATC-ACTGTAGTA-CCAGGACAGTTGGAAT  233

seq1  GGCCATTTATTTTTACAAGATGGCGCAGGGGCTTGTGGGAGATCCCTGAG  298
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGCCATTTATTTTTACAAGATGGCGCAGGGGCTTGTGGGAGAT-CCTGAG  282

seq1  CTCTGGAGTGAGGGAGTCTTCTCTGAGTGACATTTTAGCTTTCAGGTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGTGAGGGAGTCTTCTCTGAGTGACATTTTAGCTTTCAGGTATT  332

seq1  TTCCCCTCTGGGTTGGGGAATGCCACCCCTCCTTTACCTTCCTGCAGTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTGGGTTGGGGAATGCCACCCCTCCTTTACCTTCCTGCAGTGT  382

seq1  CCAAGATCCCTTGGTTTAGTAGAAGGGAGAGTCTGTGGGAATACCCATAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCCCTTGGTTTAGTAGAAGGGAGAGTCTGTGGGAATACCCATAG  432

seq1  ATTTCCCCGCATAAAGGCTGGAGAGTTCTGAGTCTGATGTATGAGATGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCGCATAAAGGCTGGAGAGTTCTGAGTCTGATGTATGAGATGCT  482

seq1  AAAACTGGGGCCTGGTCCAGGATTGCTTCTGGGTAGTGAGAGGTACTAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGGGCCTGGTCCAGGATTGCTTCTGGGTAGTGAGAGGTACTAGA  532

seq1  TAAAGAGCAGCAGTCTGCTCTGCTCTAATGATGAAGCTAGACACAGAGGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCAGCAGTCTGCTCTGCTCTAATGATGAAGCTAGACACAGAGGT  582

seq1  GGTACACCAGGAATGGAGACACAGCTACAGGGACTGATGGGGACTGTACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACCAGGAATGGAGACACAGCTACAGGGACTGATGGGGACTGTACC  632

seq1  TTGATCCTGTAAAATCCTTGGCTTGGAAGAATATGCGTAGGACTTTGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTGTAAAATCCTTGGCTTGGAAGAATATGCGTAGGACTTTGTTT  682

seq1  CTATCTAAACTTATATGTCAGGTAGGCCAGCTTCTCCTGGGGCACTAGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTAAACTTATATGTCAGGTAGGCCAGCTTCTCCTGGGGCACTAGGA  732

seq1  GTTGTGTTGTCCTGGTGGCAAGTACTGCTAGGACACTAGGCATAGCACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTGTCCTGGTGGCAAGTACTGCTAGGACACTAGGCATAGCACTG  782

seq1  AGTGATTTTATTCATTTTTCCCAAGCCTTAGCTATCTCAGGCAAAATGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTTATTCATTTTTCCCAAGCCTTAGCTATCTCAGGCAAAATGGG  832

seq1  ATAGCAATACAGACCTTACAGCATTCCTATGAGGACCGTGTGAGAGGACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATACAGACCTTACAGCATTCCTATGAGGACCGTGTGAGAGGACA  882

seq1  TCTGTAAAGCATCATTAAGCCGGACCCTGAGGTTCAGTTAATGGTAGTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAGCATCATTAAGCCGGACCCTGAGGTTCAGTTAATGGTAGTAA  932

seq1  GATGACAGTGACAAAGAGGACTGCTGAGAATGACAGAGCTCATATTAAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAGTGACAAAGAGGACTGCTGAGAATGACAGAGCTCATATTAAGG  982

seq1  AGGCTTAGCACAGGCCACATTTATTCCACAGTTAGCTTAGGCATAATGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAGCACAGGCCACATTTATTCCACAGTTAGCTTAGGCATAATGAA  1032

seq1  CCGTGAAACATCTTCCTGTGTCTACAGCCTTCTAGCTTCTCCCCCCTCCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAAACATCTTCCTGTGTCTACAGCCTTCTAGCTTCTCCCCCCTCCC  1082

seq1  TCTGCTCTAATGTCCAATCAGCACAACTCTAGCCTCATTTGAGGAGGGGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTAATGTCCAATCAGCACAACTCTAGCCTCATTTGAGGAGGGGA  1132

seq1  CGGCGTTCTACACAGGAATTC  1169
      |||||||||||||||||||||
seq2  CGGCGTTCTACACAGGAATTC  1153